Miyakogusa Predicted Gene

Lj2g3v2183310.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2183310.3 tr|B9I2B5|B9I2B5_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_661646
PE=4,65.89,3e-19,seg,NULL,CUFF.38710.3
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g38530.1                                                       145   2e-35
Glyma14g36550.1                                                       114   3e-26

>Glyma02g38530.1 
          Length = 594

 Score =  145 bits (365), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 85/118 (72%), Gaps = 1/118 (0%)

Query: 1   MHTRIRPETAPVTIPHPMMGKGSRNLSPNFSDXXXXXXXXXXXXXXDTSSSQESPSGVRS 60
           M TR+  ETAPVTIPH +MGK SRNLSPNFSD              D  SSQESPSG+RS
Sbjct: 360 MKTRMCSETAPVTIPHSVMGKSSRNLSPNFSDPSRNSLPPLSPRRTD-GSSQESPSGIRS 418

Query: 61  FRKIETSKIGQKIVRDSKDDSGRFXXXXXXXXXPRIGFSRTSSKLSFQDDLDDGDFSC 118
           FRK+E S+ GQK VRDSK+DSGRF         PRIGFSRTSS+LSFQD+LDDGDFSC
Sbjct: 419 FRKLEASRTGQKFVRDSKEDSGRFSGLLSSSDSPRIGFSRTSSRLSFQDELDDGDFSC 476


>Glyma14g36550.1 
          Length = 526

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 72/118 (61%), Gaps = 17/118 (14%)

Query: 1   MHTRIRPETAPVTIPHPMMGKGSRNLSPNFSDXXXXXXXXXXXXXXDTSSSQESPSGVRS 60
           M TRIR ETAPVTIPH +MGK SRNLSPNFSD              D  SSQESPSG+R 
Sbjct: 309 MQTRIRSETAPVTIPHSVMGKSSRNLSPNFSDPSRNSLPPLSPRRTD-GSSQESPSGIR- 366

Query: 61  FRKIETSKIGQKIVRDSKDDSGRFXXXXXXXXXPRIGFSRTSSKLSFQDDLDDGDFSC 118
                          DSK+DSGRF         P IGFSRTSS+LSFQD+LDDGDFSC
Sbjct: 367 ---------------DSKEDSGRFSGLLSSSGSPHIGFSRTSSRLSFQDELDDGDFSC 409