Miyakogusa Predicted Gene
- Lj2g3v2171880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2171880.1 Non Chatacterized Hit- tr|D7LYB7|D7LYB7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,58.21,8e-18,seg,NULL; DUF3133,Protein of unknown function
DUF3133; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NU,CUFF.38808.1
(1099 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g36530.1 570 e-162
Glyma02g38390.1 446 e-125
Glyma06g14660.1 395 e-109
Glyma16g02990.1 66 3e-10
Glyma07g06350.1 65 4e-10
Glyma19g44330.1 63 2e-09
Glyma03g41710.1 59 4e-08
>Glyma14g36530.1
Length = 646
Score = 570 bits (1470), Expect = e-162, Method: Compositional matrix adjust.
Identities = 362/701 (51%), Positives = 425/701 (60%), Gaps = 98/701 (13%)
Query: 404 EILSGSDGDEVNHHKLAPIGVSPEADIDGARKAESEELNH-GKLLFEGTEELNMCASDRE 462
++ SG D +EVN+ A +G +P+ DI+G+ +A SE+ N+ LL EELN CA D E
Sbjct: 11 DLFSGLDREEVNNDNSALVGANPKVDINGSNEAGSEKFNNRNLLLEVTEEELNECALDGE 70
Query: 463 DPKNGQSTLVGAKSAVDTTGNVSSTAQRLNAENFASEKESISHASP--CNEGTSSDHVSS 520
D K+ QS LVGAKS +D T N +S AQRL ++E+ ISHA P +GTS H S
Sbjct: 71 DRKHDQSGLVGAKSEMDNTRN-ASIAQRL-----STEEGRISHAYPRELEKGTSGYHASF 124
Query: 521 PRNVHHRFDLARSVDTFDHTEAINP------SLGALSKSPTTRSSHAYDGSVCSNDGMDE 574
+ +HHRFD RSVDTF + E INP +LG LSKS T +S HAYDGS+ SNDG+DE
Sbjct: 125 -KAIHHRFDRVRSVDTFVNAEVINPGFETSGTLGGLSKSSTIQSYHAYDGSISSNDGVDE 183
Query: 575 RIPNHHLYSFENTYTVADGVSEGESRXXXXXXLVHNMSYGDLETQHQSYFPNRR------ 628
+ PN ++ S ENTYTVA+GVSEG SR LV++M GDLETQHQSYF RR
Sbjct: 184 QFPNQYVDSLENTYTVANGVSEGGSRKGKG--LVNSMLCGDLETQHQSYFRERRPRVPRD 241
Query: 629 --NHINEGPETTRHSHANWMRAKKDEFPSKIPLXXXXXXXXXXXXXXXXQLRDELYGASS 686
++NE PETTRH A+WMR KKDEFP+++P Q+ DELY +SS
Sbjct: 242 SRRNLNEVPETTRHGRAHWMRTKKDEFPARVPNHRSGSLSGYESGSTSNQMHDELYCSSS 301
Query: 687 YLSPDSFEDPDLEKMKLLRMVYKLQEQLNRTSYANGETNGRLSNEIHVSAYQSHDFHEXX 746
Y SPDSF+DPD EKMKL T Y NGETNGRLS HVSAYQSHD HE
Sbjct: 302 YRSPDSFDDPDQEKMKL-------------TCYLNGETNGRLSMGSHVSAYQSHDLHERR 348
Query: 747 XXXXXXXXXXXXXYSHGINSHQRHNFSRIPYLPEPRSSPNHVEHPGFHCYPQEWQCSGEF 806
SHG + Q+HNF +P L EP SS +HV+H F C PQ+ QCS E
Sbjct: 349 LYHGLDYPRCDEICSHGTDWCQKHNFPHVPCLTEPTSSIHHVDHSFFPCCPQQCQCSTEL 408
Query: 807 PPHVLYQHEELYRPHPGHNXXXXXXXXXXXXQWFTTSKPVHGRETKSCDQRLRAPEMRSY 866
PP LYQHEEL RP PGHN QW + P HG ETKSCDQ+LR PE
Sbjct: 409 PPCDLYQHEELCRPSPGHNCCSPHHSYPSGPQWL-KNLPAHGHETKSCDQKLR-PE---- 462
Query: 867 FREKPSLTRRHCRPVAGGAPFVTCYKCSKLLQLPADFLLFKRVCSELKCGECQEVLKFSL 926
LLQLP+DFLLFKRV +LKCG CQEVLKFSL
Sbjct: 463 -----------------------------LLQLPSDFLLFKRVYHQLKCGACQEVLKFSL 493
Query: 927 QNRSHIVSYAPNGLG-PKSSDLNDQNEMIDGSHPHSESHANHCHSSNADPISYSDDYDNS 985
QNRSHIVSYAPNGL P SS L+DQNE+IDGS+PHSESHA+H ISYSDDY +S
Sbjct: 494 QNRSHIVSYAPNGLKPPSSSSLDDQNEVIDGSNPHSESHADH--------ISYSDDYGHS 545
Query: 986 VVKSSSSEGEPVSVTPSHHLH----DNPSVSPGNFEPTAENDKKASRGPSTSKPPVH--- 1038
V KS SSEG+PVS P H LH D +VS G EP E DK ASR STSK PV
Sbjct: 546 VGKSYSSEGDPVSAAPLHPLHGSAYDKQTVSSGTLEPITEKDKTASRSLSTSKAPVETDE 605
Query: 1039 -----SSNMSS---ATALPKSSTLHQLMGYSSPSLVLRGFP 1071
S+N+ S A + PKSS LHQLMGY+SPS V+RG P
Sbjct: 606 QAVNSSNNVPSELEAHSQPKSSPLHQLMGYTSPSQVIRGIP 646
>Glyma02g38390.1
Length = 387
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/408 (61%), Positives = 280/408 (68%), Gaps = 36/408 (8%)
Query: 679 DELYGASSYLSPDSFEDPDLEKMKLLRMVYKLQEQLNRTSYANGETNGRLSNEIHVSAYQ 738
DELY +SSY SPDSF+DPD EKMKLLRMVYKLQEQLNRTSY NGETNGRLS HVS+YQ
Sbjct: 1 DELYCSSSYRSPDSFDDPDQEKMKLLRMVYKLQEQLNRTSYLNGETNGRLSMGSHVSSYQ 60
Query: 739 SHDFHEXXXXXXXXXXXXXXXYSHGINSHQRHNFSRI-PYLPEPRSSPNHVEHPGFHCYP 797
SHD HE SHG N Q+HNFS + PYL EP SS +HV+H F C P
Sbjct: 61 SHDLHERRLYHSSDYPRCDGICSHGTNRCQKHNFSHVVPYLTEPTSSIHHVDHSFFPCCP 120
Query: 798 QEWQCSGEFPPHVLYQHEELYRPHPGHNXXXXXXXXXXXXQWFTTSK-PVHGRETKSCDQ 856
Q+WQCS E PP LYQHEEL RP+ GH+ QW TS P H ET S DQ
Sbjct: 121 QQWQCSAELPPRDLYQHEELCRPNQGHSCCSPCHSYPSSPQWLMTSNLPAHAHETNSYDQ 180
Query: 857 RLRAPEMRSYFREKPSLTRRHCRPVAGGAPFVTCYKCSKLLQLPADFLLFKRVCSELKCG 916
R R PE++ YF EKPSLTRRH RPVAGGAPFVTC+KC KLLQLPADFLLFKRV +LKCG
Sbjct: 181 RHR-PEVKKYFWEKPSLTRRHYRPVAGGAPFVTCHKCLKLLQLPADFLLFKRVYHQLKCG 239
Query: 917 ECQEVLKFSLQNRSHIVSYAPNGLGP--KSSDLNDQNEMIDGSHPHSESHANHCHSSNAD 974
CQEVLKFSLQNRSHIVSYAPN L P SS+L+D+NE+IDGS+PHS SHA+H
Sbjct: 240 ACQEVLKFSLQNRSHIVSYAPNALEPPSSSSNLDDRNEVIDGSNPHSVSHADH------- 292
Query: 975 PISYSDDYDNSVVKSSSSEGEPVSVTPSHHLHDNPSVSPGNFEPTAENDKKASRGPSTSK 1034
ISYSDDY +SV KS SSEG+P +VS G EP E DK ASR P+TSK
Sbjct: 293 -ISYSDDYGHSVGKSYSSEGDPQ------------TVSSGTLEPITEKDKNASRSPTTSK 339
Query: 1035 PPVH--------SSNMSS---ATALPKSSTLHQLMGYSSPSLVLRGFP 1071
PV S+N+SS A + PKSS LH+LMGY+SPS V+RG P
Sbjct: 340 APVETDEQAVNSSNNVSSELEAHSQPKSSPLHRLMGYTSPSQVIRGIP 387
>Glyma06g14660.1
Length = 699
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 271/587 (46%), Positives = 339/587 (57%), Gaps = 58/587 (9%)
Query: 404 EILSGSDGDEVNHHKLAPIGVSPEADIDGARKAESEELNHGKLLFEGTEELNMCASDRED 463
E+ S + + N+ K +G + E ++ K +EELN GKL EG E A D ED
Sbjct: 133 ELSSALERKDANNDKSVIVGENLE--LETTEKNIAEELNDGKLS-EGAEH----APDGED 185
Query: 464 PKNGQSTLVGAKSAVDTTGNVSSTAQRLNAENFASEKESISHASP--CNEGTSSDHVSS- 520
N S + GAK VDTT N S+T + + EK +I H +P EGT ++ SS
Sbjct: 186 SNNDPSAIEGAKPEVDTTENASTT------DRTSREKGNILHVTPDKVEEGTPANPTSSH 239
Query: 521 ------PRNVHHRFDLARSVDTFDHTEAINPS-------LGALSKSPTTRSSHAYDGSVC 567
+ +H D RSVDT TE I+PS G L KSPTTRSS AYDGS+
Sbjct: 240 KQQKKAKKIIHRGSDRVRSVDT---TELIDPSSELSGILAGKLPKSPTTRSSFAYDGSLS 296
Query: 568 SNDGMDERIPNHHLYSFENTYTVADGVSEGESRXXXXXXLVHNMSYGDLETQHQSYFPNR 627
S DGMDE P H SF+NTYT A+GVSEG +R LV N YG LETQHQS+ N
Sbjct: 297 SYDGMDEPFPIQHSGSFDNTYTNANGVSEGRTRKGKG--LV-NSIYGGLETQHQSHMSNA 353
Query: 628 RNHI--------NEGPETTRHSHANWMRAKKDEFPSKIPLXXXXXXXXXXXXXXXXQLRD 679
+ H N+ ++TR+ H WM K+DEFP KIPL Q+ D
Sbjct: 354 KLHAKKDSRGNQNKVVDSTRNGHQRWMGTKRDEFPPKIPLHRSGSHSYYERGSSSNQMHD 413
Query: 680 ELYGASSYLSPDSFEDPDLEKMKLLRMVYKLQEQLNRTSYANGETNGRLSNEI-----HV 734
LY +SS+LSPDS ED D EKMKLLRM+ KLQ+QL+RT Y GETNGRL + H+
Sbjct: 414 ALYHSSSFLSPDSSEDTDHEKMKLLRMINKLQDQLSRTLYKGGETNGRLPKGVSYKGNHI 473
Query: 735 SAYQSHDFHEXXXXXXXXXXXX-XXXYSHGINSHQRHN-FSRIPYLPEPRSSPNHVEHPG 792
SAY SHDF E HG+N HQRH+ FSRIPY E + +HV+H
Sbjct: 474 SAYHSHDFGEGRRFSHSLDYPSCDGRCGHGVNWHQRHHKFSRIPYSAEATRNAHHVDHSC 533
Query: 793 FHCYPQEWQCSGEFP--PHVLYQHEELYRPHPGHNX-XXXXXXXXXXXQWFTTSK--PVH 847
+HC+ QE S + PHVL+QHE L+ G + QWF SK P++
Sbjct: 534 YHCFSQERHFSTDMSMSPHVLFQHEGLHGSCSGQDCCSFSHHSYPSSPQWFIASKLPPIY 593
Query: 848 GRETKSCDQRLRAPEMRSYFREKPSLT-RRHCRPVAGGAPFVTCYKCSKLLQLPADFLLF 906
GR+TKS +QR RAP+++ Y REK +L +RH RPVAGGAPFVTC+KC LLQLPADFLLF
Sbjct: 594 GRKTKSDEQRRRAPDLKKYLREKKNLVAKRHHRPVAGGAPFVTCHKCLNLLQLPADFLLF 653
Query: 907 KRVCSELKCGECQEVLKFSLQNRSHIVSYAP-NGLGPKSSDLNDQNE 952
+R C +L CGEC EVLKFS+ SHI ++P N +GP SSDLN ++E
Sbjct: 654 ERACHQLICGECSEVLKFSMHG-SHIDFFSPNNAIGPPSSDLNGRSE 699
>Glyma16g02990.1
Length = 874
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 876 RHCRPVAGGAPFVTCYKCSKLLQLPADFLLFKRVCSE-LKCGECQEVLKFSLQNRSHIVS 934
RHC P+AGG+PF+TC+ C +LLQLP L+ + C + ++CG C +KF++ ++ + S
Sbjct: 489 RHCLPIAGGSPFITCHICYELLQLPKKTLVMVKNCQQKMRCGACSSEIKFAVIDKKLVFS 548
>Glyma07g06350.1
Length = 847
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 871 PSLTRRHCRPVAGGAPFVTCYKCSKLLQLPAD-FLLFKRVCSELKCGECQEVLKFSLQNR 929
P R C P+AGG+PF+TC+ C +LLQLP ++ K +++CG C +KFS+ N+
Sbjct: 435 PGTGSRQCLPIAGGSPFITCHICFELLQLPKKTLVMVKNRQLKMRCGACSTEIKFSVINK 494
Query: 930 SHIVS 934
I+S
Sbjct: 495 KLIIS 499
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 4 ESAPKPRLVLCPKCRQLLPESPDYDVYKCGGCGTILQAKKR 44
E + K RLV CPKC+ +LPE +Y +Y+CG C T+L+ K +
Sbjct: 2 EDSTKLRLVRCPKCQNVLPELANYTIYQCGACNTVLRGKPK 42
>Glyma19g44330.1
Length = 804
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 4 ESAPKPRLVLCPKCRQLLPESPDYDVYKCGGCGTILQAKKR 44
+SA K RLV CPKC+ LLPE DY VY+CGGCG +L+AK +
Sbjct: 3 DSANKVRLVRCPKCQNLLPELADYSVYQCGGCGAVLRAKHK 43
>Glyma03g41710.1
Length = 801
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 4 ESAPKPRLVLCPKCRQLLPESPDYDVYKCGGCGTILQA 41
+SA K RLV CPKC+ LLPE DY VY+CGGCG +L+
Sbjct: 3 DSANKLRLVRCPKCQNLLPELADYSVYQCGGCGAVLRG 40
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 862 EMRSYFREKP-----SLTRRHCRPVAGGAPFVTCYKCSKLLQLPAD-FLLFKRVCSELKC 915
EM + R +P + + + C P AGG+PF++C+ C +LL LP +L K +++C
Sbjct: 405 EMSGFVRSRPRKVMLASSSQRCYPAAGGSPFISCHNCFELLLLPKKALVLVKNHQQKVQC 464
Query: 916 GECQEVLKFSLQNRSHIVS 934
G C + F++ N+ +VS
Sbjct: 465 GACSSEISFAVINKKLVVS 483