Miyakogusa Predicted Gene

Lj2g3v2125450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2125450.1 tr|G7KA09|G7KA09_MEDTR Protein SMG9 OS=Medicago
truncatula GN=MTR_5g061700 PE=4
SV=1,59.63,4e-17,seg,NULL,NODE_80234_length_334_cov_96.335327.path3.1
         (105 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g01310.1                                                       132   7e-32
Glyma01g43840.1                                                       132   9e-32

>Glyma11g01310.1 
          Length = 393

 Score =  132 bits (333), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 69/105 (65%), Positives = 74/105 (70%), Gaps = 1/105 (0%)

Query: 1   MWHLMLTVDLLKHGIPDPXXXXXXXXXXXXXGHEKDNKLSGREYMATPVFVHTKLHDQEF 60
           MWHLMLTVDLLKHGI DP               EKD      EYMATPVFVHTKL DQ+F
Sbjct: 205 MWHLMLTVDLLKHGISDPSLMTSLSQSSSSG-LEKDKLPEHEEYMATPVFVHTKLQDQDF 263

Query: 61  TPKNFVQLRKTLIQYFKPSSFVREHAEHKPEEHISSSMVHDSPMD 105
           TP N VQLRK L+QYF+PS FVREH E+KPEEH+SSS VH S MD
Sbjct: 264 TPSNSVQLRKALMQYFRPSYFVREHTENKPEEHVSSSPVHGSQMD 308


>Glyma01g43840.1 
          Length = 392

 Score =  132 bits (332), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 68/105 (64%), Positives = 76/105 (72%), Gaps = 2/105 (1%)

Query: 1   MWHLMLTVDLLKHGIPDPXXXXXXXXXXXXXGHEKDNKLSGREYMATPVFVHTKLHDQEF 60
           +WHLMLTVDLLKHGI DP             G EKD      EYMATPVFVHTKL DQ+F
Sbjct: 205 LWHLMLTVDLLKHGISDPSLMTSSLSQSSSSGLEKDKLPEHEEYMATPVFVHTKLQDQDF 264

Query: 61  TPKNFVQLRKTLIQYFKPSSFVREHAEHKPEEHISSSMVHDSPMD 105
           TP NFVQLRK L+QYF+PSSFVRE  ++KPEEH+SSS+V  S MD
Sbjct: 265 TPSNFVQLRKALMQYFRPSSFVRE--QNKPEEHVSSSLVRGSQMD 307