Miyakogusa Predicted Gene

Lj2g3v2124620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2124620.1 Non Chatacterized Hit- tr|E1Z740|E1Z740_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,42.4,5e-18,UMP1,Proteasome maturation factor UMP1; PROTEASOME
MATURATION PROTEIN (UMP1),NULL; PROTEASOME MATURA,CUFF.38607.1
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g09870.1                                                       226   4e-60
Glyma12g02180.1                                                       225   1e-59
Glyma12g02180.2                                                       216   6e-57
Glyma06g30370.1                                                        52   2e-07

>Glyma11g09870.1 
          Length = 144

 Score =  226 bits (577), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 108/139 (77%), Positives = 120/139 (86%)

Query: 4   AAKSIAHQIGGIQNDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLYGAA 63
           A+K I HQIGG+QNDALRFGL GVKSDIVGSHPLQS+ +S  +++E MKRQC VNLYG A
Sbjct: 6   ASKFIPHQIGGVQNDALRFGLHGVKSDIVGSHPLQSSLQSTRRMDEAMKRQCKVNLYGTA 65

Query: 64  FPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFTGSLDDFGFEDYLSDPRESETIRPLDMH 123
           FP+K +LDRQILSRFQRP G IPSSMLGLE  TGS+D FGFED L+DPRESET RPLDMH
Sbjct: 66  FPMKEELDRQILSRFQRPPGPIPSSMLGLETVTGSVDHFGFEDCLNDPRESETFRPLDMH 125

Query: 124 HGMEVRLGLSKGPVCPSFM 142
           HGMEVRLGLSKGPV PS +
Sbjct: 126 HGMEVRLGLSKGPVYPSII 144


>Glyma12g02180.1 
          Length = 144

 Score =  225 bits (573), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 107/139 (76%), Positives = 119/139 (85%)

Query: 4   AAKSIAHQIGGIQNDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLYGAA 63
           A+K I HQIGG+QND LRFGL GVKSDIVGSHPLQS+ +S  +++E MK+QC VNLYG A
Sbjct: 6   ASKFIPHQIGGVQNDVLRFGLHGVKSDIVGSHPLQSSLQSTRRMDEAMKKQCKVNLYGTA 65

Query: 64  FPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFTGSLDDFGFEDYLSDPRESETIRPLDMH 123
           FPLK +LDRQILSRFQRP G IPSSMLGLE  TGS+D FGFED L+DPRESET RPLDMH
Sbjct: 66  FPLKEELDRQILSRFQRPPGPIPSSMLGLETVTGSVDHFGFEDCLNDPRESETFRPLDMH 125

Query: 124 HGMEVRLGLSKGPVCPSFM 142
           HGMEVRLGLSKGPV PS +
Sbjct: 126 HGMEVRLGLSKGPVYPSII 144


>Glyma12g02180.2 
          Length = 142

 Score =  216 bits (550), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 105/139 (75%), Positives = 117/139 (84%), Gaps = 2/139 (1%)

Query: 4   AAKSIAHQIGGIQNDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLYGAA 63
           A+K I HQIGG+QND LRFGL GVKSDIVGSHPLQS+ +S  +++E MK+QC VNLYG A
Sbjct: 6   ASKFIPHQIGGVQNDVLRFGLHGVKSDIVGSHPLQSSLQSTRRMDEAMKKQCKVNLYGTA 65

Query: 64  FPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFTGSLDDFGFEDYLSDPRESETIRPLDMH 123
           FPLK +LDRQIL  FQRP G IPSSMLGLE  TGS+D FGFED L+DPRESET RPLDMH
Sbjct: 66  FPLKEELDRQIL--FQRPPGPIPSSMLGLETVTGSVDHFGFEDCLNDPRESETFRPLDMH 123

Query: 124 HGMEVRLGLSKGPVCPSFM 142
           HGMEVRLGLSKGPV PS +
Sbjct: 124 HGMEVRLGLSKGPVYPSII 142


>Glyma06g30370.1 
          Length = 60

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 5/47 (10%)

Query: 63  AFPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFTGSLDDFGFEDYLS 109
            FPLK +L+R     FQ+P G IPS +LGLE  TG++D FGFED L+
Sbjct: 7   TFPLKEELNR-----FQQPPGPIPSLILGLEIVTGNIDHFGFEDCLN 48