Miyakogusa Predicted Gene

Lj2g3v2124470.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2124470.1 Non Chatacterized Hit- tr|D8U4I2|D8U4I2_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,34.44,0.000002,seg,NULL,CUFF.38591.1
         (244 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g44050.1                                                       304   4e-83
Glyma01g44050.2                                                       296   2e-80

>Glyma01g44050.1 
          Length = 259

 Score =  304 bits (779), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 151/218 (69%), Positives = 170/218 (77%), Gaps = 1/218 (0%)

Query: 28  HSHHSFPIGLKPKP-NFTCQAVFSDDAPFAAAIGACMXXXXXXXXXXXXXXXXXXDAITP 86
           H+     + LKP P NFTC+AVFSDDAPFAAAIGACM                   A+T 
Sbjct: 38  HAAIGLRLRLKPYPTNFTCKAVFSDDAPFAAAIGACMFTSLLLPVSTSSEDDDADSAVTT 97

Query: 87  TDARFAVMGIISFIPYFNWLSWVFAWLDTRKPRYAVFALVYLAPYLRTNLSISPEESWLP 146
           TDAR AVMGI+SFIPYFNWL+WVFAWLDT K RYAV+ALVYLAPYLR+NLS+SPEESWLP
Sbjct: 98  TDARLAVMGILSFIPYFNWLTWVFAWLDTGKRRYAVYALVYLAPYLRSNLSLSPEESWLP 157

Query: 147 IASILFCIVHIQLEASIRNGDIQGFRLFRNIGDQPSSSAGKSGHLNQHEEMSEEGNKKGK 206
           IASILFCIVHIQLEASIRNGDIQGF+LFRN+ DQ SS+  K  HLN H+EMSEEG KK K
Sbjct: 158 IASILFCIVHIQLEASIRNGDIQGFQLFRNVADQLSSNNRKKDHLNLHQEMSEEGIKKEK 217

Query: 207 QNLPPPQVQLRDIGDWDDSQRPPKFQQHLNEDLENDGE 244
           +NLP  Q Q RDIG W+DSQRP + +QHLNEDL++D E
Sbjct: 218 KNLPHAQEQSRDIGGWEDSQRPLQPRQHLNEDLDDDKE 255


>Glyma01g44050.2 
          Length = 256

 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 149/218 (68%), Positives = 168/218 (77%), Gaps = 4/218 (1%)

Query: 28  HSHHSFPIGLKPKP-NFTCQAVFSDDAPFAAAIGACMXXXXXXXXXXXXXXXXXXDAITP 86
           H+     + LKP P NFTC+AVFSDDAPFAAAIGACM                   A+T 
Sbjct: 38  HAAIGLRLRLKPYPTNFTCKAVFSDDAPFAAAIGACMFTSLLLPVSTSSEDDDADSAVTT 97

Query: 87  TDARFAVMGIISFIPYFNWLSWVFAWLDTRKPRYAVFALVYLAPYLRTNLSISPEESWLP 146
           TDAR AVMGI+SFIPYFNWL+WVFAWLDT K RYAV+ALVYLAPYLR+NLS+SPEESWLP
Sbjct: 98  TDARLAVMGILSFIPYFNWLTWVFAWLDTGKRRYAVYALVYLAPYLRSNLSLSPEESWLP 157

Query: 147 IASILFCIVHIQLEASIRNGDIQGFRLFRNIGDQPSSSAGKSGHLNQHEEMSEEGNKKGK 206
           IASILFCIVHIQLEASIRNGDIQGF+LFRN+ DQ SS+  K  HLN H+EMSEE   K K
Sbjct: 158 IASILFCIVHIQLEASIRNGDIQGFQLFRNVADQLSSNNRKKDHLNLHQEMSEE---KEK 214

Query: 207 QNLPPPQVQLRDIGDWDDSQRPPKFQQHLNEDLENDGE 244
           +NLP  Q Q RDIG W+DSQRP + +QHLNEDL++D E
Sbjct: 215 KNLPHAQEQSRDIGGWEDSQRPLQPRQHLNEDLDDDKE 252