Miyakogusa Predicted Gene

Lj2g3v2102990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2102990.1 tr|G7K978|G7K978_MEDTR Ethylene-responsive
transcription factor ERF019 OS=Medicago truncatula
GN=MTR,45.74,5e-18,seg,NULL,CUFF.38694.1
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g01700.1                                                        78   4e-15
Glyma01g44230.1                                                        74   8e-14

>Glyma11g01700.1 
          Length = 179

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 64/123 (52%), Gaps = 8/123 (6%)

Query: 39  RPSTAEKLNFPEALSSYCAHQRDDMSPRSVQRVASDFAMDVDARKVAAGETESHVSSENR 98
           RPS+ +KLNFPE LSSY    RD MSPRSVQ+VASD  MDVDAR + AG+T S V +E  
Sbjct: 65  RPSSLDKLNFPETLSSYSVQLRD-MSPRSVQKVASDVGMDVDARNIVAGKT-STVGAETN 122

Query: 99  ARDGGHVRSSSGAHDAGQVASADVXXXXXXXXXXXXXXXXXXXXMSRDYGEGEALSISIE 158
                   ++S  +  G+   AD                       RD     ALSISIE
Sbjct: 123 CESDERTSTASVCNVVGE-GGADHSDVFWWDDDGGSWHGSGGDSTERD-----ALSISIE 176

Query: 159 DYL 161
           DYL
Sbjct: 177 DYL 179


>Glyma01g44230.1 
          Length = 152

 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 41/55 (74%), Gaps = 1/55 (1%)

Query: 38  RRPSTAEKLNFPEALSSYCAHQRDDMSPRSVQRVASDFAMDVDARKVAAGETESH 92
           RRPS+ +KLNFPE LSS+    RD MSPRSVQ+VASD  MDVDAR + AG  + H
Sbjct: 57  RRPSSLDKLNFPETLSSFSLQLRD-MSPRSVQKVASDIGMDVDARNILAGGADEH 110