Miyakogusa Predicted Gene
- Lj2g3v2089750.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2089750.2 tr|B9HP09|B9HP09_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1088048 PE=4
SV=1,85.69,0,BchD-ChlD: magnesium chelatase ATPase subunit D,Magnesium
chelatase, ATPase subunit D; von Willebran,CUFF.38559.2
(473 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g43630.1 501 e-141
Glyma11g01840.1 497 e-140
Glyma11g01840.2 299 4e-81
>Glyma01g43630.1
Length = 634
Score = 501 bits (1289), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/305 (87%), Positives = 274/305 (89%)
Query: 169 FIFDAEGGFVDEKLLFFAQQAQRKRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA 228
FIFDAEGG VDEKLLFFAQQAQR+RG+AGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA
Sbjct: 330 FIFDAEGGLVDEKLLFFAQQAQRRRGRAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA 389
Query: 229 TLRAAAPYQKLRREKDTESRRKVYVEKTDXXXXXXXXXXGALVIFVVDASGSMALNRMQN 288
TLRAAAPYQKLRREKD+ + RKV+VEKTD GALVIFVVDASGSMALNRMQN
Sbjct: 390 TLRAAAPYQKLRREKDSGNSRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQN 449
Query: 289 AKGAALKLLAESYTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHG 348
AKGAALKLLAESYTSRDQVSIIPFRGD+AEVLLPPSRSIAMARKRLERLPCGGGSPLAHG
Sbjct: 450 AKGAALKLLAESYTSRDQVSIIPFRGDAAEVLLPPSRSIAMARKRLERLPCGGGSPLAHG 509
Query: 349 LTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLKRSNXXXXXXXXXXXXXXXXXLKDEI 408
LTTAVRVGLNAEKSGDVGR+MIVAITDGRANISLKRS LKDEI
Sbjct: 510 LTTAVRVGLNAEKSGDVGRVMIVAITDGRANISLKRSTDPEVAAATDAPKPSAQELKDEI 569
Query: 409 LEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISSATKEALS 468
LEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISSATKEALS
Sbjct: 570 LEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISSATKEALS 629
Query: 469 ALKNS 473
ALK+S
Sbjct: 630 ALKSS 634
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/113 (88%), Positives = 110/113 (97%)
Query: 1 MSFEDRVAAVGVATEFQENSGQVFKMIEEETDTAKTQIILSREYLKDVTISTEQLKYLVI 60
MSFE+RVAAVG+ATEFQENS QVF+M+EEETD AKTQIIL+REYLKDVT++ +QLKYLVI
Sbjct: 168 MSFENRVAAVGIATEFQENSSQVFEMVEEETDNAKTQIILAREYLKDVTLNRDQLKYLVI 227
Query: 61 EALRGGCQGHRAELYAARVAKCLAALEGREKVFVDDLKKAVELVILPRSIITE 113
EALRGGCQGHRAEL+AARVAKCLAALEGREKV+VDDLKKAVELVILPRSIITE
Sbjct: 228 EALRGGCQGHRAELFAARVAKCLAALEGREKVYVDDLKKAVELVILPRSIITE 280
>Glyma11g01840.1
Length = 750
Score = 497 bits (1280), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/305 (86%), Positives = 273/305 (89%)
Query: 169 FIFDAEGGFVDEKLLFFAQQAQRKRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA 228
FIFDAEGG VDEKLLFFAQQAQR+RG+AGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA
Sbjct: 446 FIFDAEGGLVDEKLLFFAQQAQRRRGRAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA 505
Query: 229 TLRAAAPYQKLRREKDTESRRKVYVEKTDXXXXXXXXXXGALVIFVVDASGSMALNRMQN 288
TLRAAAPYQKLRR KD+ + RKV+VEKTD GALVIFVVDASGSMALNRMQN
Sbjct: 506 TLRAAAPYQKLRRAKDSGNNRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQN 565
Query: 289 AKGAALKLLAESYTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHG 348
AKGAALKLLAESYTSRDQVSIIPFRGD+AEVLLPPSRSI+MARKRLERLPCGGGSPLAHG
Sbjct: 566 AKGAALKLLAESYTSRDQVSIIPFRGDAAEVLLPPSRSISMARKRLERLPCGGGSPLAHG 625
Query: 349 LTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLKRSNXXXXXXXXXXXXXXXXXLKDEI 408
LTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLKRS LKDEI
Sbjct: 626 LTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLKRSTDPEAAAATDAPKPSAQELKDEI 685
Query: 409 LEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISSATKEALS 468
LEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISSATKEALS
Sbjct: 686 LEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISSATKEALS 745
Query: 469 ALKNS 473
ALK+S
Sbjct: 746 ALKSS 750
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/113 (88%), Positives = 110/113 (97%)
Query: 1 MSFEDRVAAVGVATEFQENSGQVFKMIEEETDTAKTQIILSREYLKDVTISTEQLKYLVI 60
MSFE+RVAAVG+ATEFQENS QVF+M+EEETD AKTQIIL+REYLKDVT++ EQLKYLVI
Sbjct: 284 MSFENRVAAVGIATEFQENSSQVFEMVEEETDNAKTQIILAREYLKDVTLNREQLKYLVI 343
Query: 61 EALRGGCQGHRAELYAARVAKCLAALEGREKVFVDDLKKAVELVILPRSIITE 113
EALRGGCQGHRAEL+AARVAKCLAALEGREKV+VDDLKKAVELVILPRSI+TE
Sbjct: 344 EALRGGCQGHRAELFAARVAKCLAALEGREKVYVDDLKKAVELVILPRSIVTE 396
>Glyma11g01840.2
Length = 626
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/180 (88%), Positives = 166/180 (92%)
Query: 169 FIFDAEGGFVDEKLLFFAQQAQRKRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA 228
FIFDAEGG VDEKLLFFAQQAQR+RG+AGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA
Sbjct: 446 FIFDAEGGLVDEKLLFFAQQAQRRRGRAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA 505
Query: 229 TLRAAAPYQKLRREKDTESRRKVYVEKTDXXXXXXXXXXGALVIFVVDASGSMALNRMQN 288
TLRAAAPYQKLRR KD+ + RKV+VEKTD GALVIFVVDASGSMALNRMQN
Sbjct: 506 TLRAAAPYQKLRRAKDSGNNRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQN 565
Query: 289 AKGAALKLLAESYTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHG 348
AKGAALKLLAESYTSRDQVSIIPFRGD+AEVLLPPSRSI+MARKRLERLPCGGGSPLAHG
Sbjct: 566 AKGAALKLLAESYTSRDQVSIIPFRGDAAEVLLPPSRSISMARKRLERLPCGGGSPLAHG 625
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/113 (88%), Positives = 110/113 (97%)
Query: 1 MSFEDRVAAVGVATEFQENSGQVFKMIEEETDTAKTQIILSREYLKDVTISTEQLKYLVI 60
MSFE+RVAAVG+ATEFQENS QVF+M+EEETD AKTQIIL+REYLKDVT++ EQLKYLVI
Sbjct: 284 MSFENRVAAVGIATEFQENSSQVFEMVEEETDNAKTQIILAREYLKDVTLNREQLKYLVI 343
Query: 61 EALRGGCQGHRAELYAARVAKCLAALEGREKVFVDDLKKAVELVILPRSIITE 113
EALRGGCQGHRAEL+AARVAKCLAALEGREKV+VDDLKKAVELVILPRSI+TE
Sbjct: 344 EALRGGCQGHRAELFAARVAKCLAALEGREKVYVDDLKKAVELVILPRSIVTE 396