Miyakogusa Predicted Gene

Lj2g3v2088030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2088030.1 Non Chatacterized Hit- tr|B9RCP4|B9RCP4_RICCO
Coiled-coil domain-containing protein, putative
OS=Ric,31.02,2e-18,coiled-coil,NULL; seg,NULL,CUFF.38527.1
         (240 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g02500.1                                                       159   3e-39
Glyma05g37060.1                                                       139   2e-33

>Glyma08g02500.1 
          Length = 646

 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/243 (44%), Positives = 141/243 (58%), Gaps = 47/243 (19%)

Query: 1   MAQREEEIFALLREQES---GASTKADIDDLRLEFETLQEQKSKLKLQNEQSQKECSERL 57
           M Q+ EEI   ++EQE+   GAS         +E  +L   K+KL               
Sbjct: 340 MTQKGEEISIFMKEQENHKNGAS---------MEVMSL---KAKLN-------------- 373

Query: 58  AKMENLNVKLETQVADQEETIKKLTETIDQIHAENNQARIWSKKFRSYQQFTERKMDELT 117
           AK+ENLN  LETQ+ DQ + I++L E       EN QA+I   K +  Q   ERKM+EL 
Sbjct: 374 AKVENLNTNLETQIDDQAKMIERLNE-------ENKQAKIVYSKLKLIQVTAERKMNELA 426

Query: 118 EEFRRKMEDNIRILHQRIHVAEQLNNENKDSHKMTRQRYEQENNILGEKVASYEDEIRTL 177
           EEFRRKMEDNIR+LHQRIHVAEQLNNENK+S K+T+QRYE EN  LG K+ASY +E  T 
Sbjct: 427 EEFRRKMEDNIRLLHQRIHVAEQLNNENKNSCKVTKQRYEDENKNLGLKIASYREETTTR 486

Query: 178 KASPEEVSXXXXXXXXXXXXDFAAGKLEEYREYVLSLVSKMMSEVQFAKGWVKKRNGEMK 237
                E+             D    K+EE+     S V++M  +V+F K W+K+RNGE+K
Sbjct: 487 VPIRFEL-------VAQNSLDLVVEKVEEH----TSRVTRMRCKVEFVKDWMKERNGEVK 535

Query: 238 QLK 240
           +L+
Sbjct: 536 ELR 538


>Glyma05g37060.1 
          Length = 499

 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 133/247 (53%), Gaps = 64/247 (25%)

Query: 1   MAQREEEIFALLREQES---GAST-----KADIDDLRLEFETLQEQKSKLKLQNEQSQKE 52
           M Q+ EEI   +RE E+   GAS      K  ++ +RLE +T+ +Q              
Sbjct: 209 MTQKGEEISIFMREHENHKNGASMEVMALKEKLNGMRLELDTMHDQ-------------- 254

Query: 53  CSERLAKMENLNVKLETQVADQEETIKKLTETIDQIHAENNQARIWSKKFRSYQQFTERK 112
                                         +TI++++ EN QA+I   K +  Q   ERK
Sbjct: 255 -----------------------------AKTIERVNEENKQAKIVYSKLKLIQVTAERK 285

Query: 113 MDELTEEFRRKMEDNIRILHQRIHVAEQLNNENKDSHKMTRQRYEQENNILGEKVASYED 172
           M+EL EEFRRKMEDNIR+LHQRIHVAEQLNNENK S K+T+QRYE+EN  LG K+ASY++
Sbjct: 286 MNELAEEFRRKMEDNIRLLHQRIHVAEQLNNENKYSCKVTKQRYEEENKNLGLKIASYKE 345

Query: 173 EIRT-LKASPEEVSXXXXXXXXXXXXDFAAGKLEEYREYVLSLVSKMMSEVQFAKGWVKK 231
           E  T +    E V+            D    K+EE+    +S +++M  EV+F K W+++
Sbjct: 346 EKTTRVPIGFELVA--------LNRLDLVVEKVEEH----MSRMARMRCEVEFVKDWMRE 393

Query: 232 RNGEMKQ 238
           RNGE+K+
Sbjct: 394 RNGEVKE 400