Miyakogusa Predicted Gene
- Lj2g3v2087720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2087720.1 Non Chatacterized Hit- tr|G7ZX45|G7ZX45_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,25.78,6e-18,Rep_fac-A_C,Replication factor A, C-terminal;
Nucleic acid-binding proteins,Nucleic acid-binding, OB,CUFF.38510.1
(395 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g12770.1 64 4e-10
Glyma07g33700.1 64 4e-10
Glyma01g23480.1 63 5e-10
Glyma15g30050.1 60 3e-09
Glyma07g12410.1 59 1e-08
Glyma03g27710.1 58 2e-08
Glyma04g35300.1 57 3e-08
Glyma09g16030.1 57 3e-08
Glyma03g23400.1 56 6e-08
Glyma11g25240.1 55 1e-07
Glyma10g26560.1 54 2e-07
Glyma02g29220.1 54 3e-07
Glyma09g24370.1 52 1e-06
Glyma10g16380.1 50 5e-06
Glyma13g14400.1 49 8e-06
>Glyma10g12770.1
Length = 302
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 98 EMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIVR 155
+++ KD ++ KT++++ + VCVT G I ++ D W YP+CI CH + ++
Sbjct: 71 KLSSKDAFLSKAKAKTISEINDISEDVVCVTVGTISKIVMDNHSWCYPACIQCHRKTDIQ 130
Query: 156 TGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKF--VIPFE 213
TG + C C + Q + RYR+++ V S+ F+ DRE E++ + ++ V +
Sbjct: 131 TGPFTC-GCGKDNDQPVLRYRVEVMVCQNNDSSKFLHWDRECAELIGQIADEVNRVKIED 189
Query: 214 AQLDVEFPLEVEENVIGKKMLFKVERIAGLTYNGTPCYEVIRVCSDLELIEMFRSGLAVT 273
+D+ +V + ++G FKV RI N V+R ++L+LI + + LA T
Sbjct: 190 GDVDLNASHQVFDRLLGYVFAFKV-RIQSKFRNAI----VLRYSNELDLINVVLNMLADT 244
>Glyma07g33700.1
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 98 EMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLI-RDEPWTYPSCI-CHDELIVR 155
+++ KD ++ KT+ ++ + VCVT G I ++ + W YP+C+ CH + ++
Sbjct: 107 QLSSKDAFLSKVEAKTIYEINGISEDVVCVTVGTISKIVMNNHSWCYPACVQCHRKTDIQ 166
Query: 156 TGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKF--VIPFE 213
TG + C C + Q + RYR+++ V S+ F+L DRE E++ ++ ++ V +
Sbjct: 167 TGPFTC-GCGKNNDQPVLRYRVEVMVSQNNDSSKFLLWDRECAELIGQTADEVNRVKIED 225
Query: 214 AQLDVEFPLEVEENVIGKKMLFKVERIAGLTYNGTPCYEVIRVCSDLELIEMFRSGLAVT 273
+D+ + + ++G + FKV RI N V+R ++L+LI + LA T
Sbjct: 226 GDVDLNASPQAVDRLLGYVLAFKV-RIQSKFRNVV----VLRCSNELDLINVVLDMLADT 280
>Glyma01g23480.1
Length = 316
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 98 EMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIVR 155
+++ KD ++ KT++++ + VCVT I ++ D W YP+CI CH + ++
Sbjct: 108 QLSSKDAFLSKSEAKTISEINGISEDVVCVTMDTISKIVVDNHSWCYPACIQCHRKTYIQ 167
Query: 156 TGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKF--VIPFE 213
TG + C C + Q + RYR+++ V S+ F+L DRE E++ ++ ++ V +
Sbjct: 168 TGPFTC-GCGKDNDQPVLRYRVEVMVSQNNDSSKFLLWDRECAELIGQTADEVNRVKIED 226
Query: 214 AQLDVEFPLEVEENVIGKKMLFKVERIAGLTYNGTPCYEVIRVCSDLELIEMFRSGLAVT 273
+D+ + + ++G + FKV RI N V+R ++L+LI + LA T
Sbjct: 227 GDVDLNASPQALDRLLGYVLAFKV-RIQSKFRNAI----VLRYLNELDLINVVLDMLADT 281
>Glyma15g30050.1
Length = 144
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 97 LEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIV 154
++++ K+ KT+ ++ + VCVT G I ++ D W Y +CI CH +
Sbjct: 19 IQLSSKESFFGKAEAKTIVEINTISEEIVCVTVGTITRIVLDNHSWCYTACIQCHKKSDT 78
Query: 155 RTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
+ + C CD++ +++ RYRL++ + G +S F+L DRE E++ +S
Sbjct: 79 KMAPFTCA-CDKYNKEVVLRYRLEVMINQGNESTKFLLWDRECSELIGQS 127
>Glyma07g12410.1
Length = 144
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 97 LEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIV 154
++++ K+ KT+ + + VCVT G I ++ D W Y +CI CH + V
Sbjct: 19 IQLSSKESFFGKAEAKTIADINTISEEIVCVTVGTITRIVLDNHSWCYTACIQCHKKSDV 78
Query: 155 RTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
+ C CD++ +++ RYRL++ + G +S F+L D E E++ +S
Sbjct: 79 EMAPFTCA-CDKYNKEVVLRYRLEVMINQGNESTKFLLWDHECSELIGQS 127
>Glyma03g27710.1
Length = 144
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 97 LEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIV 154
++++ K+ KT+ ++ + VCVT G I ++ D W Y +CI CH +
Sbjct: 19 IQLSSKESFFGKAEAKTIAEINTISEEIVCVTVGTITRIVLDNHSWCYTTCIECHKKSDA 78
Query: 155 RTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
+ CV C ++ + + RYRL++ + G +S F+L DRE E++ +S
Sbjct: 79 EMTPFTCV-CSKYNKEAVLRYRLEVMINQGNESTKFLLWDRECSELIGQS 127
>Glyma04g35300.1
Length = 144
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 97 LEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIV 154
++++ K+ KT+ + + VCVT G I ++ D W Y +CI CH +
Sbjct: 19 IQLSSKESFFGKTEAKTIADINTISEEIVCVTVGTITRIVLDNHSWCYIACIQCHKKSDA 78
Query: 155 RTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
G + C C ++ + + RYRL++ + G +S F+L DRE E++ +S
Sbjct: 79 EMGPFTCA-CGKYNKEAVLRYRLEVMINQGNESTKFLLWDRECSELIGQS 127
>Glyma09g16030.1
Length = 144
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 97 LEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIV 154
++++ K+ KT+ ++ + VCVT G I ++ D W Y +CI CH +
Sbjct: 19 IQLSSKESFFGKAEAKTIVEINAISEEIVCVTVGTITRIVLDNHSWCYTACIQCHKKSDA 78
Query: 155 RTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
+ C C ++ +++ RYRL++ + G +S F+L DRE E++ +S
Sbjct: 79 EMAPFTCA-CGKYNKEVVLRYRLEVMINQGNESTKFLLWDRECSELIGQS 127
>Glyma03g23400.1
Length = 144
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 97 LEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIV 154
++++ K+ KT+ + + VCVT G I ++ D W Y SCI CH +
Sbjct: 19 IQLSSKESFFGKAEGKTIADINTISEEIVCVTVGTITRIVLDNHSWCYTSCIQCHKKSDA 78
Query: 155 RTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
+ C C ++ +++ RYRL++ + G +S F+L DRE E++ +S
Sbjct: 79 EMTPFTCA-CGKYNKEVVLRYRLEVMINQGNESTKFLLWDRECSELIGQS 127
>Glyma11g25240.1
Length = 179
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 96 KLEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELI 153
++++ K+ KT+ ++ + VCVT G I ++ D W Y +CI CH +
Sbjct: 53 SIQLSSKESFFGKTEAKTIVEINTISEEIVCVTVGTITRIVLDNHSWCYTACIQCHKKSD 112
Query: 154 VRTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
+ C C ++ +++ RYRL++ + G +S F+L DRE E++ +S
Sbjct: 113 AEMAPFTCA-CGKYNKEVVLRYRLEVMINQGNESTKFLLWDRECSELIGQS 162
>Glyma10g26560.1
Length = 144
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 97 LEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIV 154
++++ K+ KT+ ++ + VCVT G I ++ D W Y +CI CH +
Sbjct: 26 IQLSSKESFFGKAEAKTIVEINTISEEIVCVTVGTITRIVLDNHSWCYTACIQCHKKSDA 85
Query: 155 RTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
+ C + +++ RYRLK+ + +G +S F+L DRE +++ +S
Sbjct: 86 EMAPFTCAH-GKHNKEVVLRYRLKVMINEGNESTKFLLWDRECSQLIGQS 134
>Glyma02g29220.1
Length = 144
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 97 LEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIV 154
++++ K+ KT+ + + VCVT G I ++ D + W Y +CI CH +
Sbjct: 19 IQLSSKESFFGKAEAKTIADINTISKEIVCVTVGTITRIVLDNDSWCYTTCIQCHKKSDA 78
Query: 155 RTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
+ C C ++ + + RYRL++ + G ++ F+L DRE E++ +S
Sbjct: 79 EMAPFTCA-CGKYNKEAMLRYRLEVMINQGDENTKFLLWDRECSELIGQS 127
>Glyma09g24370.1
Length = 144
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 97 LEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGL-IRDEPWTYPSCI-CHDELIV 154
++++ K+ KT+ ++ + VCVT I + + + W Y +CI CH +
Sbjct: 19 IQLSSKESFFGNAEAKTIVEINTISEEIVCVTVDTITRIQLDNHSWCYTACIQCHKKSDA 78
Query: 155 RTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
+ C C ++ +++ RYRL++ + G +S F+L DRE E++ +S
Sbjct: 79 EMAPFTCA-CGKYNKEVVLRYRLEVMINQGNESTKFLLWDRECSELIGQS 127
>Glyma10g16380.1
Length = 146
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 97 LEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRD-EPWTYPSCI-CHDELIV 154
++++ K+ KT+ ++ + VCVT G I ++ D W Y +CI CH + V
Sbjct: 19 IQLSSKESFFGKAEAKTIAEINTISEEIVCVTVGTITRIVMDNHSWCYTTCIQCHKKSDV 78
Query: 155 RTGVYEC-VRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKS 204
+ + +++ + + RYRL++ + G +S F+L DRE E++ +S
Sbjct: 79 EMAPFTLELNTNKYNKEDVLRYRLEVMINHGDESTKFLLWDRECSELIGQS 129
>Glyma13g14400.1
Length = 143
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 127 VTYGGIVGLIRD-EPWTYPSCI-CHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFDG 184
VT G I ++ D W Y +CI CH + + C C ++ +++ RYRL++ + G
Sbjct: 48 VTVGTITRIVLDNHSWCYTTCIQCHKKRDAEMAPFRCA-CSKYNKEVVLRYRLEVMINQG 106
Query: 185 YQSAVFVLSDREVKEVMKKS 204
+S F+L DRE E++ +S
Sbjct: 107 NESTKFLLWDRECSELIGQS 126