Miyakogusa Predicted Gene

Lj2g3v2051030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2051030.1 tr|B9GKD9|B9GKD9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_815072 PE=4 SV=1,61.9,2e-19,
,CUFF.38467.1
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g02430.1                                                       133   5e-32
Glyma01g43080.1                                                       129   9e-31
Glyma01g43080.2                                                        82   1e-16
Glyma05g37510.1                                                        80   4e-16
Glyma13g06390.1                                                        69   1e-12
Glyma13g06390.2                                                        68   2e-12
Glyma01g07550.5                                                        67   4e-12
Glyma01g07550.4                                                        67   4e-12
Glyma02g13180.5                                                        67   6e-12
Glyma02g13180.4                                                        67   6e-12
Glyma02g13180.3                                                        67   6e-12
Glyma02g13180.1                                                        67   6e-12
Glyma19g03950.1                                                        61   3e-10
Glyma01g07550.1                                                        54   3e-08

>Glyma11g02430.1 
          Length = 99

 Score =  133 bits (334), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 68/84 (80%), Positives = 74/84 (88%), Gaps = 1/84 (1%)

Query: 16 YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSP-DAGAPPNTKVAVSNNRSQGPNLGNFVT 74
          YLF SEE+P+QP PTKTAPLPPYGIDIDN +P  A AP NT++ VSNNRSQG +LGN VT
Sbjct: 16 YLFGSEEKPNQPLPTKTAPLPPYGIDIDNAAPPHAVAPSNTQLVVSNNRSQGHHLGNIVT 75

Query: 75 DRPSTKVKSVPGGHSSLGYLFGDK 98
          DRPSTKVKSVPGGHSSLGYLFGDK
Sbjct: 76 DRPSTKVKSVPGGHSSLGYLFGDK 99


>Glyma01g43080.1 
          Length = 96

 Score =  129 bits (323), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 76/98 (77%), Positives = 87/98 (88%), Gaps = 2/98 (2%)

Query: 1  MSRGDNSGGGQSSLGYLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPPNTKVAVS 60
          M+RG++SGGGQSSLGYLF SEE+P+QP PT+TAPLPPYGIDIDN+ P  G+  N ++ VS
Sbjct: 1  MNRGESSGGGQSSLGYLFGSEEKPNQPLPTRTAPLPPYGIDIDNSMPHHGS--NCQLVVS 58

Query: 61 NNRSQGPNLGNFVTDRPSTKVKSVPGGHSSLGYLFGDK 98
          NNRSQG +LGN VTDRPSTKVKSVPGGHSSLGYLFGDK
Sbjct: 59 NNRSQGHHLGNIVTDRPSTKVKSVPGGHSSLGYLFGDK 96


>Glyma01g43080.2 
          Length = 73

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/74 (70%), Positives = 63/74 (85%), Gaps = 2/74 (2%)

Query: 1  MSRGDNSGGGQSSLGYLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPPNTKVAVS 60
          M+RG++SGGGQSSLGYLF SEE+P+QP PT+TAPLPPYGIDIDN+ P  G+  N ++ VS
Sbjct: 1  MNRGESSGGGQSSLGYLFGSEEKPNQPLPTRTAPLPPYGIDIDNSMPHHGS--NCQLVVS 58

Query: 61 NNRSQGPNLGNFVT 74
          NNRSQG +LGN VT
Sbjct: 59 NNRSQGHHLGNIVT 72


>Glyma05g37510.1 
          Length = 87

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 58/86 (67%), Gaps = 14/86 (16%)

Query: 14 LGYLFRSEEQPSQPQP-TKTAPLPPYGIDIDNNSPDAGAPPNTKVAVSNNRSQGPNLGNF 72
          L YLF SEE+P  P P T +  LPPYGIDID N      PP          +QG +LGN 
Sbjct: 15 LNYLFGSEERPKPPPPKTVSYSLPPYGIDIDINH----NPPT---------AQGQHLGNV 61

Query: 73 VTDRPSTKVKSVPGGHSSLGYLFGDK 98
          +T+RPSTKVKSVPGGHSSLGYLFGDK
Sbjct: 62 LTNRPSTKVKSVPGGHSSLGYLFGDK 87


>Glyma13g06390.1 
          Length = 136

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 63/119 (52%), Gaps = 26/119 (21%)

Query: 1   MSRGDNSGGGQSSLGYLFRS-------EEQPSQPQPTKTAPLPPYGID------------ 41
           M RG ++GGGQSSLGYLF S         QP+    T+ A  P   +D            
Sbjct: 16  MGRGVSAGGGQSSLGYLFGSGVPASSANSQPANGARTQNASAPSPPVDKQSPAPAPAPAP 75

Query: 42  ----IDNNSPDAGAPPNTKVAVSNNRSQGPNLGNFVTDRPSTKVKSVPGGHSSLGYLFG 96
               ID   P AG P + K   + +R+ G N GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 76  ASSPIDKQIP-AGIPGSLKN--NYHRADGQNCGNFLTDRPSTKVHAAPGGGSSLNYLFG 131


>Glyma13g06390.2 
          Length = 121

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 63/119 (52%), Gaps = 26/119 (21%)

Query: 1   MSRGDNSGGGQSSLGYLFRS-------EEQPSQPQPTKTAPLPPYGID------------ 41
           M RG ++GGGQSSLGYLF S         QP+    T+ A  P   +D            
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGVPASSANSQPANGARTQNASAPSPPVDKQSPAPAPAPAP 60

Query: 42  ----IDNNSPDAGAPPNTKVAVSNNRSQGPNLGNFVTDRPSTKVKSVPGGHSSLGYLFG 96
               ID   P AG P + K   + +R+ G N GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 61  ASSPIDKQIP-AGIPGSLKN--NYHRADGQNCGNFLTDRPSTKVHAAPGGGSSLNYLFG 116


>Glyma01g07550.5 
          Length = 108

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 6/88 (6%)

Query: 16  YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
           YLF S E P+    T  AP  P    ++N  P   +PP      N    ++++ + G N 
Sbjct: 16  YLFGSGEAPAPKPATNNAPAQPEVQAVNNVPPPKASPPTKTIDPNKAAGINSHSTDGQNT 75

Query: 70  GNFVTDRPSTKVKSVPGGHSSLGYLFGD 97
           GNF+TDRPSTKV + PGG SSLGYLFG+
Sbjct: 76  GNFITDRPSTKVHAAPGGGSSLGYLFGE 103


>Glyma01g07550.4 
          Length = 108

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 6/88 (6%)

Query: 16  YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
           YLF S E P+    T  AP  P    ++N  P   +PP      N    ++++ + G N 
Sbjct: 16  YLFGSGEAPAPKPATNNAPAQPEVQAVNNVPPPKASPPTKTIDPNKAAGINSHSTDGQNT 75

Query: 70  GNFVTDRPSTKVKSVPGGHSSLGYLFGD 97
           GNF+TDRPSTKV + PGG SSLGYLFG+
Sbjct: 76  GNFITDRPSTKVHAAPGGGSSLGYLFGE 103


>Glyma02g13180.5 
          Length = 108

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 16  YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
           YLF S E P+    T  AP  P    ++N  P   +PP      N    ++++ + G N 
Sbjct: 16  YLFGSGEAPAAKPATNNAPAQPEVQAVNNAPPSKASPPTKTIDPNKAAGINSHSTDGQNT 75

Query: 70  GNFVTDRPSTKVKSVPGGHSSLGYLFG 96
           GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 76  GNFITDRPSTKVHAAPGGGSSLSYLFG 102


>Glyma02g13180.4 
          Length = 108

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 16  YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
           YLF S E P+    T  AP  P    ++N  P   +PP      N    ++++ + G N 
Sbjct: 16  YLFGSGEAPAAKPATNNAPAQPEVQAVNNAPPSKASPPTKTIDPNKAAGINSHSTDGQNT 75

Query: 70  GNFVTDRPSTKVKSVPGGHSSLGYLFG 96
           GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 76  GNFITDRPSTKVHAAPGGGSSLSYLFG 102


>Glyma02g13180.3 
          Length = 108

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 16  YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
           YLF S E P+    T  AP  P    ++N  P   +PP      N    ++++ + G N 
Sbjct: 16  YLFGSGEAPAAKPATNNAPAQPEVQAVNNAPPSKASPPTKTIDPNKAAGINSHSTDGQNT 75

Query: 70  GNFVTDRPSTKVKSVPGGHSSLGYLFG 96
           GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 76  GNFITDRPSTKVHAAPGGGSSLSYLFG 102


>Glyma02g13180.1 
          Length = 108

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 16  YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
           YLF S E P+    T  AP  P    ++N  P   +PP      N    ++++ + G N 
Sbjct: 16  YLFGSGEAPAAKPATNNAPAQPEVQAVNNAPPSKASPPTKTIDPNKAAGINSHSTDGQNT 75

Query: 70  GNFVTDRPSTKVKSVPGGHSSLGYLFG 96
           GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 76  GNFITDRPSTKVHAAPGGGSSLSYLFG 102


>Glyma19g03950.1 
          Length = 156

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 60/129 (46%), Gaps = 37/129 (28%)

Query: 1   MSRGDNSGGGQSSLGYLFRSEEQPSQPQPTKT----APLPPYGIDIDNNSP--------- 47
           M RG ++GGGQSSL YLF S    S     +T    AP PP    +D  SP         
Sbjct: 27  MGRGVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPP----VDKQSPAPAAAAAPA 82

Query: 48  ------------------DAGAPPNTKVAVSNN--RSQGPNLGNFVTDRPSTKVKSVPGG 87
                             D   P     ++ NN  R+ G N GNF+TDRPSTKV + PGG
Sbjct: 83  PAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADGQNCGNFLTDRPSTKVHAAPGG 142

Query: 88  HSSLGYLFG 96
            SSL YLFG
Sbjct: 143 GSSLHYLFG 151


>Glyma01g07550.1 
          Length = 128

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 26/110 (23%)

Query: 14  LGYLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAP------PNTKVAVSNNRSQGP 67
           LGYLF S E P+    T  AP  P    ++N  P   +P      PN    ++++ + G 
Sbjct: 14  LGYLFGSGEAPAPKPATNNAPAQPEVQAVNNVPPPKASPPTKTIDPNKAAGINSHSTDGQ 73

Query: 68  NLGNFVT--------------------DRPSTKVKSVPGGHSSLGYLFGD 97
           N GNF+T                    DRPSTKV + PGG SSLGYLFG+
Sbjct: 74  NTGNFITMKTHGDMNGFILWRYKGLSLDRPSTKVHAAPGGGSSLGYLFGE 123