Miyakogusa Predicted Gene
- Lj2g3v2051030.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2051030.1 tr|B9GKD9|B9GKD9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_815072 PE=4 SV=1,61.9,2e-19,
,CUFF.38467.1
(98 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g02430.1 133 5e-32
Glyma01g43080.1 129 9e-31
Glyma01g43080.2 82 1e-16
Glyma05g37510.1 80 4e-16
Glyma13g06390.1 69 1e-12
Glyma13g06390.2 68 2e-12
Glyma01g07550.5 67 4e-12
Glyma01g07550.4 67 4e-12
Glyma02g13180.5 67 6e-12
Glyma02g13180.4 67 6e-12
Glyma02g13180.3 67 6e-12
Glyma02g13180.1 67 6e-12
Glyma19g03950.1 61 3e-10
Glyma01g07550.1 54 3e-08
>Glyma11g02430.1
Length = 99
Score = 133 bits (334), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/84 (80%), Positives = 74/84 (88%), Gaps = 1/84 (1%)
Query: 16 YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSP-DAGAPPNTKVAVSNNRSQGPNLGNFVT 74
YLF SEE+P+QP PTKTAPLPPYGIDIDN +P A AP NT++ VSNNRSQG +LGN VT
Sbjct: 16 YLFGSEEKPNQPLPTKTAPLPPYGIDIDNAAPPHAVAPSNTQLVVSNNRSQGHHLGNIVT 75
Query: 75 DRPSTKVKSVPGGHSSLGYLFGDK 98
DRPSTKVKSVPGGHSSLGYLFGDK
Sbjct: 76 DRPSTKVKSVPGGHSSLGYLFGDK 99
>Glyma01g43080.1
Length = 96
Score = 129 bits (323), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/98 (77%), Positives = 87/98 (88%), Gaps = 2/98 (2%)
Query: 1 MSRGDNSGGGQSSLGYLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPPNTKVAVS 60
M+RG++SGGGQSSLGYLF SEE+P+QP PT+TAPLPPYGIDIDN+ P G+ N ++ VS
Sbjct: 1 MNRGESSGGGQSSLGYLFGSEEKPNQPLPTRTAPLPPYGIDIDNSMPHHGS--NCQLVVS 58
Query: 61 NNRSQGPNLGNFVTDRPSTKVKSVPGGHSSLGYLFGDK 98
NNRSQG +LGN VTDRPSTKVKSVPGGHSSLGYLFGDK
Sbjct: 59 NNRSQGHHLGNIVTDRPSTKVKSVPGGHSSLGYLFGDK 96
>Glyma01g43080.2
Length = 73
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 63/74 (85%), Gaps = 2/74 (2%)
Query: 1 MSRGDNSGGGQSSLGYLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPPNTKVAVS 60
M+RG++SGGGQSSLGYLF SEE+P+QP PT+TAPLPPYGIDIDN+ P G+ N ++ VS
Sbjct: 1 MNRGESSGGGQSSLGYLFGSEEKPNQPLPTRTAPLPPYGIDIDNSMPHHGS--NCQLVVS 58
Query: 61 NNRSQGPNLGNFVT 74
NNRSQG +LGN VT
Sbjct: 59 NNRSQGHHLGNIVT 72
>Glyma05g37510.1
Length = 87
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 58/86 (67%), Gaps = 14/86 (16%)
Query: 14 LGYLFRSEEQPSQPQP-TKTAPLPPYGIDIDNNSPDAGAPPNTKVAVSNNRSQGPNLGNF 72
L YLF SEE+P P P T + LPPYGIDID N PP +QG +LGN
Sbjct: 15 LNYLFGSEERPKPPPPKTVSYSLPPYGIDIDINH----NPPT---------AQGQHLGNV 61
Query: 73 VTDRPSTKVKSVPGGHSSLGYLFGDK 98
+T+RPSTKVKSVPGGHSSLGYLFGDK
Sbjct: 62 LTNRPSTKVKSVPGGHSSLGYLFGDK 87
>Glyma13g06390.1
Length = 136
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 1 MSRGDNSGGGQSSLGYLFRS-------EEQPSQPQPTKTAPLPPYGID------------ 41
M RG ++GGGQSSLGYLF S QP+ T+ A P +D
Sbjct: 16 MGRGVSAGGGQSSLGYLFGSGVPASSANSQPANGARTQNASAPSPPVDKQSPAPAPAPAP 75
Query: 42 ----IDNNSPDAGAPPNTKVAVSNNRSQGPNLGNFVTDRPSTKVKSVPGGHSSLGYLFG 96
ID P AG P + K + +R+ G N GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 76 ASSPIDKQIP-AGIPGSLKN--NYHRADGQNCGNFLTDRPSTKVHAAPGGGSSLNYLFG 131
>Glyma13g06390.2
Length = 121
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 1 MSRGDNSGGGQSSLGYLFRS-------EEQPSQPQPTKTAPLPPYGID------------ 41
M RG ++GGGQSSLGYLF S QP+ T+ A P +D
Sbjct: 1 MGRGVSAGGGQSSLGYLFGSGVPASSANSQPANGARTQNASAPSPPVDKQSPAPAPAPAP 60
Query: 42 ----IDNNSPDAGAPPNTKVAVSNNRSQGPNLGNFVTDRPSTKVKSVPGGHSSLGYLFG 96
ID P AG P + K + +R+ G N GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 61 ASSPIDKQIP-AGIPGSLKN--NYHRADGQNCGNFLTDRPSTKVHAAPGGGSSLNYLFG 116
>Glyma01g07550.5
Length = 108
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 16 YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
YLF S E P+ T AP P ++N P +PP N ++++ + G N
Sbjct: 16 YLFGSGEAPAPKPATNNAPAQPEVQAVNNVPPPKASPPTKTIDPNKAAGINSHSTDGQNT 75
Query: 70 GNFVTDRPSTKVKSVPGGHSSLGYLFGD 97
GNF+TDRPSTKV + PGG SSLGYLFG+
Sbjct: 76 GNFITDRPSTKVHAAPGGGSSLGYLFGE 103
>Glyma01g07550.4
Length = 108
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 16 YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
YLF S E P+ T AP P ++N P +PP N ++++ + G N
Sbjct: 16 YLFGSGEAPAPKPATNNAPAQPEVQAVNNVPPPKASPPTKTIDPNKAAGINSHSTDGQNT 75
Query: 70 GNFVTDRPSTKVKSVPGGHSSLGYLFGD 97
GNF+TDRPSTKV + PGG SSLGYLFG+
Sbjct: 76 GNFITDRPSTKVHAAPGGGSSLGYLFGE 103
>Glyma02g13180.5
Length = 108
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 16 YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
YLF S E P+ T AP P ++N P +PP N ++++ + G N
Sbjct: 16 YLFGSGEAPAAKPATNNAPAQPEVQAVNNAPPSKASPPTKTIDPNKAAGINSHSTDGQNT 75
Query: 70 GNFVTDRPSTKVKSVPGGHSSLGYLFG 96
GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 76 GNFITDRPSTKVHAAPGGGSSLSYLFG 102
>Glyma02g13180.4
Length = 108
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 16 YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
YLF S E P+ T AP P ++N P +PP N ++++ + G N
Sbjct: 16 YLFGSGEAPAAKPATNNAPAQPEVQAVNNAPPSKASPPTKTIDPNKAAGINSHSTDGQNT 75
Query: 70 GNFVTDRPSTKVKSVPGGHSSLGYLFG 96
GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 76 GNFITDRPSTKVHAAPGGGSSLSYLFG 102
>Glyma02g13180.3
Length = 108
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 16 YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
YLF S E P+ T AP P ++N P +PP N ++++ + G N
Sbjct: 16 YLFGSGEAPAAKPATNNAPAQPEVQAVNNAPPSKASPPTKTIDPNKAAGINSHSTDGQNT 75
Query: 70 GNFVTDRPSTKVKSVPGGHSSLGYLFG 96
GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 76 GNFITDRPSTKVHAAPGGGSSLSYLFG 102
>Glyma02g13180.1
Length = 108
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 16 YLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAPP------NTKVAVSNNRSQGPNL 69
YLF S E P+ T AP P ++N P +PP N ++++ + G N
Sbjct: 16 YLFGSGEAPAAKPATNNAPAQPEVQAVNNAPPSKASPPTKTIDPNKAAGINSHSTDGQNT 75
Query: 70 GNFVTDRPSTKVKSVPGGHSSLGYLFG 96
GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 76 GNFITDRPSTKVHAAPGGGSSLSYLFG 102
>Glyma19g03950.1
Length = 156
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 60/129 (46%), Gaps = 37/129 (28%)
Query: 1 MSRGDNSGGGQSSLGYLFRSEEQPSQPQPTKT----APLPPYGIDIDNNSP--------- 47
M RG ++GGGQSSL YLF S S +T AP PP +D SP
Sbjct: 27 MGRGVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPP----VDKQSPAPAAAAAPA 82
Query: 48 ------------------DAGAPPNTKVAVSNN--RSQGPNLGNFVTDRPSTKVKSVPGG 87
D P ++ NN R+ G N GNF+TDRPSTKV + PGG
Sbjct: 83 PAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADGQNCGNFLTDRPSTKVHAAPGG 142
Query: 88 HSSLGYLFG 96
SSL YLFG
Sbjct: 143 GSSLHYLFG 151
>Glyma01g07550.1
Length = 128
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 26/110 (23%)
Query: 14 LGYLFRSEEQPSQPQPTKTAPLPPYGIDIDNNSPDAGAP------PNTKVAVSNNRSQGP 67
LGYLF S E P+ T AP P ++N P +P PN ++++ + G
Sbjct: 14 LGYLFGSGEAPAPKPATNNAPAQPEVQAVNNVPPPKASPPTKTIDPNKAAGINSHSTDGQ 73
Query: 68 NLGNFVT--------------------DRPSTKVKSVPGGHSSLGYLFGD 97
N GNF+T DRPSTKV + PGG SSLGYLFG+
Sbjct: 74 NTGNFITMKTHGDMNGFILWRYKGLSLDRPSTKVHAAPGGGSSLGYLFGE 123