Miyakogusa Predicted Gene

Lj2g3v2051010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2051010.1 Non Chatacterized Hit- tr|G7KC08|G7KC08_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,54.12,0.000000000000009,seg,NULL,CUFF.38465.1
         (140 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g43070.1                                                        52   2e-07

>Glyma01g43070.1 
          Length = 98

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 38/80 (47%), Gaps = 14/80 (17%)

Query: 75  AKHRFKHTYPMKGS--QGILVTSKPKK------------QDNNDPIVSFSRXXXXXXXXX 120
           AK R    Y M  S  QG+L T  PKK            ++  DPIV+FSR         
Sbjct: 18  AKCRSWQIYSMNRSHSQGLLATLTPKKLEKEADKRGLATKETIDPIVAFSRPPPLPPFLG 77

Query: 121 XXXXXSLLETWWNSGSDDDG 140
                SLLETWWN G+D+DG
Sbjct: 78  PLVALSLLETWWNRGTDEDG 97