Miyakogusa Predicted Gene

Lj2g3v2017430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2017430.1 Non Chatacterized Hit- tr|F6HUG0|F6HUG0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,46.58,0.000004,
,CUFF.38424.1
         (204 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g42650.1                                                       122   2e-28

>Glyma01g42650.1 
          Length = 434

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 106/214 (49%), Gaps = 55/214 (25%)

Query: 10  NETVSLNQSHWLAHSIDNSSTKLTLQSTSGVEFSSPKSYFNGETPKASRQGESRLINLPT 69
           N  VS  QSHWL  S+DN  TKL LQ+ SG E  S  S     TP+ASRQ          
Sbjct: 240 NGMVSPKQSHWLNRSVDNILTKLILQNDSGEESCSASSR-GTPTPRASRQ---------- 288

Query: 70  DLSLNNFPDMLATNLFCSPLATTVHYEAYESPKRQKVYSSDAEFTVVDESDSPQC----- 124
                     L  +L C PL++TV  EAYES KRQKVY SD E  V DESDSP       
Sbjct: 289 ---------FLDNSLDCLPLSSTVTDEAYESLKRQKVYFSDTELKVGDESDSPLLNLSYS 339

Query: 125 -----EKKDQ-----------------------VGSESHSKISSMQDTGCSYVTPKSKFS 156
                EKK Q                       +  ++H  ++   + GC+   P S   
Sbjct: 340 KSANREKKGQAGNGGNYNSNNTMPHSVDEFSECLSPKTHMALACAYNNGCT--PPTSILK 397

Query: 157 NYMGSVSPESVLRSLAMNYENIPSIIRKRTPRKA 190
           N  G ++PE++LR+LAM YEN+PSIIRKRTP+K 
Sbjct: 398 NDTGDINPETLLRNLAMTYENVPSIIRKRTPKKG 431