Miyakogusa Predicted Gene

Lj2g3v2014170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2014170.1 Non Chatacterized Hit- tr|F6HQE5|F6HQE5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,45.83,0.00000000004, ,CUFF.38409.1
         (100 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g29110.1                                                        57   4e-09
Glyma02g35540.1                                                        46   8e-06

>Glyma07g29110.1 
          Length = 678

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 17/97 (17%)

Query: 1   MYMEMVHYGFASHMFSVLALIPALFRVERHNEIRTVIENVLRSCNLNDSELHKALGETGD 60
           +YME+ HYGFAS           L R   ++E+  V+ N+LRSC LND+++ K L E   
Sbjct: 596 LYMELEHYGFAS-----------LARERMNDELSQVLLNILRSCKLNDAKVAKVLLEV-- 642

Query: 61  DIMKGKIEIEDALLNVLAKIAMDDGLLLNGGKCSYAP 97
           +  +G +   D+ L+VL K+ + DGLL +GG  S  P
Sbjct: 643 NFKEGNM---DSFLSVLTKM-VKDGLLPDGGIHSSVP 675


>Glyma02g35540.1 
          Length = 277

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 6/76 (7%)

Query: 6   VHYGFASHMFSVLALIPALFRVERHNEIRTVIENVLRSCNLNDSELHKALGETGDDIMKG 65
           VH  +  +M +V+AL+ AL R   ++E+  +++N+LRSC LND+++ K L E   +  +G
Sbjct: 208 VHKAYNLYM-AVIALVKALAREGMNDELSRLLQNILRSCKLNDAKVAKVLVEV--NFKEG 264

Query: 66  KIEIEDALLNVLAKIA 81
            +   D +LNVL K+A
Sbjct: 265 NM---DVVLNVLTKMA 277