Miyakogusa Predicted Gene
- Lj2g3v2002880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2002880.1 tr|Q9ZWA0|Q9ZWA0_ARATH F11M21.29 protein
OS=Arabidopsis thaliana GN=F11M21.29 PE=4 SV=1,28.53,1e-17,seg,NULL;
TPX2_importin,Cell cycle regulated microtubule associated
protein,gene.g42771.t1.1
(439 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g03060.1 472 e-133
Glyma17g14600.1 362 e-100
Glyma01g42300.1 351 8e-97
Glyma17g14600.2 346 4e-95
Glyma05g04130.1 325 8e-89
Glyma06g44460.1 134 2e-31
Glyma12g13280.1 129 9e-30
Glyma19g01770.1 80 5e-15
Glyma18g26640.1 62 8e-10
>Glyma11g03060.1
Length = 521
Score = 472 bits (1214), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/468 (57%), Positives = 303/468 (64%), Gaps = 66/468 (14%)
Query: 23 FVCDEIDFDYEFDAARFFDFTAPETTAQARQAETWFQTAGSYS---FVANLLLKEED--- 76
FV EID DYEFDA RFFDF A ET AQARQAE WF +AGSY FVA L+ +E+D
Sbjct: 13 FVAHEIDLDYEFDAVRFFDFGAQETPAQARQAELWFHSAGSYPPSPFVAKLVAREDDVSE 72
Query: 77 -------PKPNFGSKAGCXXXXXXXXXXXXXXQNDAMQVQPGMTF----------SSKTI 119
K N S G +D MQ +
Sbjct: 73 CATTVHAAKSNVPSGIG---------FSRTVFHHDGMQSSSTVLLILLSQLKCCSKGGGG 123
Query: 120 GDSLNSKAKSAPR-------KGSTLMKPTASQLAKQNRPPQ------------------- 153
++++ P +GSTLM+PTAS LAKQNRP Q
Sbjct: 124 SGNISALLSGIPYDLNLQLLQGSTLMRPTASLLAKQNRPHQIDCRGITAFIPYFFSLVLR 183
Query: 154 ----VTRSRLQKAQAHTKEMNLSTSD---KIEIQAAKRQKLEGGLLRKVGDVKQQATLVH 206
V+ + Q + + + S E QAAKRQKLEGG L KV DVKQQ VH
Sbjct: 184 CFMVVSSFLIHGCQENCFSLYIYNSTIPLSSECQAAKRQKLEGGSLHKVADVKQQVNFVH 243
Query: 207 KAPKQVFSVDECSGHSKLKITIPREPDLKTAHRAERIRPKNAAEAELVTVAAPRFKARRL 266
KAPK+V +VD+ SGHSKLKITIPREPDL+TAHRA+RIRPK AAEAE+VTVA PRFKAR L
Sbjct: 244 KAPKKVATVDQNSGHSKLKITIPREPDLETAHRAQRIRPKPAAEAEVVTVAVPRFKARPL 303
Query: 267 NRKILEAPSLPLPKRSTPRLPEFHEFHLKTSERAM-HTPAASSSTLQCDGSHKDLNKHTA 325
NRKIL APS PLPKRSTPRLPEF EFHL+T ERAM HT A SSS+L C+ KDL+KHTA
Sbjct: 304 NRKILNAPSFPLPKRSTPRLPEFLEFHLRTQERAMQHTSATSSSSLHCNDFDKDLDKHTA 363
Query: 326 VSAPENIIRDLRRPSTMVAPKHDVLDFGSNFKARPLNKKILSSKGDIGVFWNRKQETTVP 385
VSA EN IRDLRRPS + APKHD LDF FKARPLNKKILSSKGDI VF NRKQETTVP
Sbjct: 364 VSAQENRIRDLRRPSALGAPKHDGLDFAHCFKARPLNKKILSSKGDIAVFLNRKQETTVP 423
Query: 386 TEFNFHTEKRVQHNPPIDLFSKLSLTSEVQSNDGSHLKPPRHSRVFRK 433
EFNFHTEKRVQHNPP +LFSK+SLTSEVQSN+GS LK PRHSRVFR+
Sbjct: 424 MEFNFHTEKRVQHNPPSELFSKMSLTSEVQSNNGSQLKLPRHSRVFRE 471
>Glyma17g14600.1
Length = 382
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/414 (51%), Positives = 249/414 (60%), Gaps = 85/414 (20%)
Query: 23 FVCDEIDFDYEFDAARFFDFTAPETTAQARQAETWFQTAGSYSFVANLLLKEEDPKPNFG 82
F+ EID DYEFDAARFFDFT PET A+A +A+ WFQ A SY
Sbjct: 20 FIAHEIDLDYEFDAARFFDFTRPETPAEAHEAQHWFQNAASYP----------------- 62
Query: 83 SKAGCXXXXXXXXXXXXXXQNDAMQVQPG-MTFSSKTIGDSLNSKAKSAPRKGSTLMKPT 141
P +TF SKTI ++LNSKAKSA K STLMKPT
Sbjct: 63 ---------------------------PSRLTFGSKTISNNLNSKAKSAVPKSSTLMKPT 95
Query: 142 ASQLAKQNRPPQVTRSRLQKAQAHTKEMNLSTSDKIEI--QAAKRQKLEGGLLRKVGDVK 199
ASQLAKQN P + N+ +S + I QAAKRQKLE GLL KV DVK
Sbjct: 96 ASQLAKQNHPAK----------------NIGSSHILLIKNQAAKRQKLESGLLCKVSDVK 139
Query: 200 QQATLVHKAPKQVFSVDECSGHSKLKITIPREPDLKTAHRAERIRPKNAAEAELVTVAAP 259
QQ HKAP +V++ S SKL++TIPREPDL+TA RA RIRPKN EAE VTVAAP
Sbjct: 140 QQTNFFHKAPMMAVTVEQNSACSKLRLTIPREPDLRTARRAHRIRPKNVGEAEHVTVAAP 199
Query: 260 RFKARRLNRKILEAPSLPLPKRSTPRLPEFHEFHLKTSERAMHTPAASSSTLQCDGSHKD 319
+FKAR LNRKILEAPS+ PKRSTPRLPEF EFHLKT ERAM +A SS+ D S K+
Sbjct: 200 KFKARPLNRKILEAPSMLPPKRSTPRLPEFQEFHLKTFERAMQHTSAMSSSFHYDDSDKN 259
Query: 320 LNKHTAVSAPENIIRDLRRPSTMVAPKHDVLDFGSNFKARPLNKKILSSKGDIGVFWNRK 379
++ G + K++PLNKKIL SKG+ GVF N K
Sbjct: 260 QGFKKVITN----------------------KCGDSDKSQPLNKKILPSKGNGGVFHNSK 297
Query: 380 QETTVPTEFNFHTEKRVQHNPPIDLFSKLSLTSEVQSNDGSHLKPPRHSRVFRK 433
QETTVP EF+ TEK VQH+PP++LFSKLSLTSE Q N+GSH K P+HS + RK
Sbjct: 298 QETTVPMEFDLQTEKEVQHDPPVELFSKLSLTSEGQPNNGSHFKLPQHSGMCRK 351
>Glyma01g42300.1
Length = 426
Score = 351 bits (901), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 190/265 (71%), Positives = 205/265 (77%), Gaps = 17/265 (6%)
Query: 117 KTIGDSLNSKAKSAPRKGSTLMKPTASQLAKQNRPPQVTRSRLQKAQAHTKEMNLSTSDK 176
KTIG +LNSK KSA KGSTLMKPTAS LAKQNRP + SR QK Q H K+MN STS
Sbjct: 162 KTIGGNLNSKVKSAVMKGSTLMKPTASLLAKQNRPHPIVSSRFQKLQDHNKKMNSSTSSG 221
Query: 177 IEIQAAKRQKLEGGLLRKVGDVKQQATLVHKAPKQVFSVDECSGHSKLKITIPREPDLKT 236
IE QAAKRQKLEGG L KVGDVKQQ VHKAPK+V +VD+ SGHSKLKITIPREPDL+T
Sbjct: 222 IECQAAKRQKLEGGSLHKVGDVKQQVNFVHKAPKKVATVDQNSGHSKLKITIPREPDLET 281
Query: 237 AHRAERIRPKNAAEAELVTVAAPRFKARRLNRKILEAPSLPLPKRSTPRLPEFHEFHLKT 296
AHRA+RIRPK AAEAE+VTVAAP F+AR LNRKIL APSLPLPKRSTPRLPEF EFHLKT
Sbjct: 282 AHRAQRIRPKIAAEAEVVTVAAPIFRARPLNRKILNAPSLPLPKRSTPRLPEFQEFHLKT 341
Query: 297 SERAM-HTPAASSSTLQCDGSHK----------------DLNKHTAVSAPENIIRDLRRP 339
ERAM HT A S+S+L C+ S K DL+KH AVSA EN IRDLRRP
Sbjct: 342 QERAMQHTSATSTSSLHCNDSDKIYMISDLRGTEVCWLQDLDKHRAVSAQENRIRDLRRP 401
Query: 340 STMVAPKHDVLDFGSNFKARPLNKK 364
S M APKHD LDF +FKARPLNKK
Sbjct: 402 SAMGAPKHDGLDFAHSFKARPLNKK 426
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 42/57 (73%), Gaps = 3/57 (5%)
Query: 23 FVCDEIDFDYEFDAARFFDFTAPETTAQARQAETWFQTAGSY---SFVANLLLKEED 76
FV EID DYEFDA RFFDF A ET AQARQAE WF +AGSY FVA L+ +E+D
Sbjct: 16 FVAHEIDLDYEFDAVRFFDFGAQETPAQARQAELWFHSAGSYPPSPFVAKLVAREDD 72
>Glyma17g14600.2
Length = 326
Score = 346 bits (887), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 193/296 (65%), Positives = 220/296 (74%), Gaps = 1/296 (0%)
Query: 138 MKPTASQLAKQNRPPQVTRSRLQKAQAHTKEMNLSTSDKIEIQAAKRQKLEGGLLRKVGD 197
MKPTASQLAKQN P + SR QK + E NLS S +E QAAKRQKLE GLL KV D
Sbjct: 1 MKPTASQLAKQNHPAKNIGSRFQKLRTQN-EQNLSISSGVENQAAKRQKLESGLLCKVSD 59
Query: 198 VKQQATLVHKAPKQVFSVDECSGHSKLKITIPREPDLKTAHRAERIRPKNAAEAELVTVA 257
VKQQ HKAP +V++ S SKL++TIPREPDL+TA RA RIRPKN EAE VTVA
Sbjct: 60 VKQQTNFFHKAPMMAVTVEQNSACSKLRLTIPREPDLRTARRAHRIRPKNVGEAEHVTVA 119
Query: 258 APRFKARRLNRKILEAPSLPLPKRSTPRLPEFHEFHLKTSERAMHTPAASSSTLQCDGSH 317
AP+FKAR LNRKILEAPS+ PKRSTPRLPEF EFHLKT ERAM +A SS+ D S
Sbjct: 120 APKFKARPLNRKILEAPSMLPPKRSTPRLPEFQEFHLKTFERAMQHTSAMSSSFHYDDSD 179
Query: 318 KDLNKHTAVSAPENIIRDLRRPSTMVAPKHDVLDFGSNFKARPLNKKILSSKGDIGVFWN 377
K +KHT+VSA EN I+DLRRP+ AP +D L F FKA+PLNKKIL SKG+ GVF N
Sbjct: 180 KGWDKHTSVSALENRIKDLRRPAAAAAPTNDGLGFTHIFKAQPLNKKILPSKGNGGVFHN 239
Query: 378 RKQETTVPTEFNFHTEKRVQHNPPIDLFSKLSLTSEVQSNDGSHLKPPRHSRVFRK 433
KQETTVP EF+ TEK VQH+PP++LFSKLSLTSE Q N+GSH K P+HS + RK
Sbjct: 240 SKQETTVPMEFDLQTEKEVQHDPPVELFSKLSLTSEGQPNNGSHFKLPQHSGMCRK 295
>Glyma05g04130.1
Length = 329
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 192/304 (63%), Positives = 212/304 (69%), Gaps = 14/304 (4%)
Query: 138 MKPTASQLAKQNRPPQVTRSRLQKAQAHTKEMNLSTSDKIEIQAAKRQKLEGGLLRKVGD 197
MKPTASQLAKQNRP + SR QK E NLS S +E QAAKRQKLEGGLL KV D
Sbjct: 1 MKPTASQLAKQNRPSKNIGSRFQKLLTRN-EHNLSISSGVESQAAKRQKLEGGLLCKVSD 59
Query: 198 VKQQATLVHKAPKQVFSVDECSGHSKLKITIPREPDLKTAHRAERIRPKNAAEAELVTVA 257
VKQQ HKAP +V++ S SKLK+T PREPDL+TA R +RIRPKN EAE VTV
Sbjct: 60 VKQQTNFFHKAPMMAVAVEQNSACSKLKLTNPREPDLRTARRGQRIRPKNVREAEHVTVP 119
Query: 258 APRFKARRLNRKILEAPSLPLPKRSTPRLPEFHEFHLKTSERAMHTPAASSSTLQCDGSH 317
APRFKAR LNRKILEAPSL KRSTPRLPEF EFHLKT ERAM +A SS+L D S
Sbjct: 120 APRFKARPLNRKILEAPSLLPHKRSTPRLPEFQEFHLKTLERAMQHTSAMSSSLHYDDSD 179
Query: 318 K-------DLNKHTAVSAPENIIRDLRRP-STMVAPKHDVLDFGSNFKARPLNKKILSSK 369
K +KHT VSA EN I+DLRRP + AP D L F FKA+ LNKKIL SK
Sbjct: 180 KTKVIWLQGWDKHTTVSALENRIKDLRRPAAAAAAPTDDGLGFTHIFKAQSLNKKILPSK 239
Query: 370 GDIGVFWNRKQETTVPTEFNFHTEKRVQHNPPIDLFSKLSLTSEVQSNDGSHLKPPRHSR 429
G+ GVF N K ETTVP TEK VQH+PPI+LFSKLSLTSE Q N+GSH K P+HS
Sbjct: 240 GNGGVFHNSKHETTVPM-----TEKEVQHDPPIELFSKLSLTSEGQPNNGSHFKLPQHSG 294
Query: 430 VFRK 433
+ RK
Sbjct: 295 MCRK 298
>Glyma06g44460.1
Length = 745
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 149/287 (51%), Gaps = 52/287 (18%)
Query: 178 EIQAAKRQKLEGGLLRKVGDVKQQATLVHKAPKQVFSVDECSG----------------- 220
E QA KRQKL+GG R++ + K Q TL H K +V +
Sbjct: 224 ENQAIKRQKLDGGKSRQILNAKHQ-TLPHNKSKLGLTVSASTSKYNKEDRKFIELCIERF 282
Query: 221 -----------------HSKLKITI--PREPDLKTAHRAERIRPKNAAEAELVTVA-APR 260
H+K K+T+ P+EP+ +T+ R R K++AE E +A P+
Sbjct: 283 MFVKHQQHQPLYHFFVSHTKPKLTLTRPKEPEFETSQRIRPPRVKSSAELEEEMMAKIPK 342
Query: 261 FKARRLNRKILEAPSLPLPKRSTPRLPEFHEFHLKTSERAMHTPAASSSTLQCDGSHKDL 320
FKAR +N+KIL+ +LP RSTP+LPEF EFHL+T RA H A ++S + SHK
Sbjct: 343 FKARPVNKKILQTATLPPVPRSTPQLPEFKEFHLETLARA-HQNADTASIASTEVSHKQS 401
Query: 321 NKHTAVSAPEN--IIRDLR-RPSTMVAPKHDVLDFGSN---FKARPLNKKILSSKGDIGV 374
+ ++ P+ + LR RP + + + FKARPLNKKI SKGDIGV
Sbjct: 402 SWKHHITEPKTPLLQTSLRARPPKVKSSLELEQEELEKIPKFKARPLNKKIFESKGDIGV 461
Query: 375 FWNRKQETTVPTEFNFHTEKRVQHNPP----IDLFSKLSLTSEVQSN 417
F++ K+ T P EF+F T++R+ PP DLF KLSL SE N
Sbjct: 462 FYHTKKHVTEPQEFHFATDERI---PPPAAMADLFGKLSLKSEPSRN 505
>Glyma12g13280.1
Length = 749
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 147/299 (49%), Gaps = 63/299 (21%)
Query: 178 EIQAAKRQKLEGGLLRKVGDVKQQATLVHKAPKQVFSVDECSGHS--------------- 222
E QA KRQKL+ G R++ +VK Q TL H K +V + S
Sbjct: 215 ENQAIKRQKLDEGKSRQIMNVKHQ-TLPHNKSKLGLTVSTSTSKSHKEDRKVYVRETPAT 273
Query: 223 ----------------------------------KLKITIPREPDLKTAHRAERIRPKNA 248
KL +T P+EP+ +T+ R R K++
Sbjct: 274 PASVPFVSMAEMMKKFQSSTRDLSLPIVVSHTKPKLTLTRPKEPEFETSQRIRPARVKSS 333
Query: 249 AEAELVTVA-APRFKARRLNRKILEAPSLPLPKRSTPRLPEFHEFHLKTSERAMHTPAAS 307
AE E +A P+FKAR LN+KIL+ +LP RSTP+LPEF EFHL+T RA H A +
Sbjct: 334 AELEEEMMAKIPKFKARPLNKKILQTATLPPVPRSTPQLPEFKEFHLETLARA-HQNADT 392
Query: 308 SSTLQCDGSHKDLNKHTAVSAPENII--RDLR-RPSTMVAPKHDVLDF---GSNFKARPL 361
+S + SHK+ + ++ P+ + LR RP + + + FKARPL
Sbjct: 393 ASIASTEVSHKESSWKPYLTEPKTPLLQTSLRARPPKVKSSLELEQEELEKAPKFKARPL 452
Query: 362 NKKILSSKGDIGVFWNRKQETTVPTEFNFHTEKRVQHNPP---IDLFSKLSLTSEVQSN 417
NKKI SKGDIGVF + K+ T P EF+F T++R+ PP DLF KLS+ SE N
Sbjct: 453 NKKIFESKGDIGVFCHTKKHVTEPQEFHFATDERIP--PPAAMADLFGKLSMKSEPARN 509
>Glyma19g01770.1
Length = 93
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/65 (64%), Positives = 47/65 (72%)
Query: 106 MQVQPGMTFSSKTIGDSLNSKAKSAPRKGSTLMKPTASQLAKQNRPPQVTRSRLQKAQAH 165
+QV GMTFSSKTIG +LNSK KSA KGSTLMKPT S LAKQN+P + SR QK Q H
Sbjct: 26 LQVTSGMTFSSKTIGGNLNSKVKSAVMKGSTLMKPTTSLLAKQNQPHPIVSSRFQKLQDH 85
Query: 166 TKEMN 170
M+
Sbjct: 86 NNLMD 90
>Glyma18g26640.1
Length = 389
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
Query: 356 FKARPLNKKILSSKGDIGVFWNRKQETTVPTEFNFHTEKRVQHNPP----IDLFSKLSLT 411
FKA PLNKKI SKGDIGVF K+ + P EF+F T++R+ PP DLF KLSL
Sbjct: 156 FKAIPLNKKIFESKGDIGVFCLTKKHVSEPQEFHFATDERI---PPPAAMADLFGKLSLN 212
Query: 412 SEVQSN 417
SE N
Sbjct: 213 SEPSRN 218