Miyakogusa Predicted Gene

Lj2g3v2002610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002610.1 tr|G7KG67|G7KG67_MEDTR CPD photolyase OS=Medicago
truncatula GN=MTR_5g011780 PE=4 SV=1,80.77,0,FAD_binding_7,DNA
photolyase, FAD-binding/Cryptochrome, C-terminal; DNA_photolyase,DNA
photolyase, N,CUFF.38373.1
         (496 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g03220.1                                                       865   0.0  
Glyma01g42150.1                                                       392   e-109

>Glyma11g03220.1 
          Length = 500

 Score =  865 bits (2235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/500 (83%), Positives = 448/500 (89%), Gaps = 5/500 (1%)

Query: 1   MASAPSPMSVNPGRIRTLKEGSPRSNGESGPVVYWMFRDQRVRDNWALIHAVHQANKANV 60
           MAS  SPM+V  GR+RTLKEGS R     GPVVYWMFRDQRV DNWALIHAV +ANKANV
Sbjct: 1   MASTASPMTVQAGRVRTLKEGS-RGESGLGPVVYWMFRDQRVTDNWALIHAVAEANKANV 59

Query: 61  PVAVVFNLFDHFLGAKSRHLGFMLRGLRQLCHQLQHTLQIPFFLFRGEAEETVSKFVREC 120
           PVAVVFNLF  FLGAKSRHLGFMLRGLRQLCH++QH+LQIPFFLF+GEAEETV KF+REC
Sbjct: 60  PVAVVFNLFHTFLGAKSRHLGFMLRGLRQLCHRMQHSLQIPFFLFQGEAEETVPKFLREC 119

Query: 121 GASLLVTDMSPLREVRRCKSEICERVGDSVMVHEVDAHNVVPIWVASDKLEYSARTIRGK 180
           GASLLVTD SPLREVRRCK EIC+RV DSV VHEVDAHNVVP+WVASDKLEYSARTIR K
Sbjct: 120 GASLLVTDFSPLREVRRCKEEICKRVSDSVAVHEVDAHNVVPLWVASDKLEYSARTIRAK 179

Query: 181 INKKLPEYLTDFPDIE--PQSRKWVVTEDRIIDWDDLIAEVLR-GAEVPEVDWCVPGEIA 237
           I K+L +YL DFPDIE  P + KWV TE+  IDWDDLIA+VLR GAEVPEVDWC PGEIA
Sbjct: 180 ITKRLSDYLVDFPDIEVEPPAGKWVATENHSIDWDDLIADVLRRGAEVPEVDWCEPGEIA 239

Query: 238 AMEVLMGSKNGFLTKRLKSY-LDRNNPCKTTALSGLSPYLHFGQISAQRCALEARKLRTS 296
           A EVLMGSKNGFLTKRLK Y LDRNNPC   ALSGLSPYLHFGQISAQRCALEARK R S
Sbjct: 240 ASEVLMGSKNGFLTKRLKGYSLDRNNPCHPNALSGLSPYLHFGQISAQRCALEARKRRNS 299

Query: 297 CPQAADAFLEELVVRRELADNFCYYQPQYDSLQGAWDWARKTLLDHAADKREHIYSKEQL 356
            PQA DAFLEEL+VRRELADN+C+YQP YDSL+GAW WA+ TL +HA DKREHIY+KEQL
Sbjct: 300 HPQAIDAFLEELIVRRELADNYCFYQPHYDSLKGAWAWAQNTLTEHATDKREHIYTKEQL 359

Query: 357 EKAQTADRLWNASQLEMVHFGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEIDG 416
           EKAQTAD LWNASQLEMVH+GKMHGFMRMYWAKKILEWTRGPEEALEI +YLNDKYE+DG
Sbjct: 360 EKAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEISLYLNDKYELDG 419

Query: 417 RDPNGYCGCMWSICGVHDQGWRERPIFGKIRYMNYEGCKRKFDVERYIAYVNKVVSEMKK 476
           RDPNGY GCMWSICGVHDQGW+ERPIFGKIRYMNY GCKRKFDV++YIAYVNK+V E+KK
Sbjct: 420 RDPNGYVGCMWSICGVHDQGWKERPIFGKIRYMNYAGCKRKFDVDKYIAYVNKLVRELKK 479

Query: 477 RKAENLISQKEKLLRSCDPE 496
           RKAENL+SQKEK++RSCDPE
Sbjct: 480 RKAENLLSQKEKVVRSCDPE 499


>Glyma01g42150.1 
          Length = 240

 Score =  392 bits (1008), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 183/232 (78%), Positives = 204/232 (87%), Gaps = 2/232 (0%)

Query: 242 LMGSKNGFLTK-RLKSY-LDRNNPCKTTALSGLSPYLHFGQISAQRCALEARKLRTSCPQ 299
           L+G   G L + +LK Y LDRNNPC   ALSGLSPYLHFGQISAQRCALEA K + S PQ
Sbjct: 8   LVGVSQGKLRQVKLKGYSLDRNNPCDPNALSGLSPYLHFGQISAQRCALEAGKQQNSHPQ 67

Query: 300 AADAFLEELVVRRELADNFCYYQPQYDSLQGAWDWARKTLLDHAADKREHIYSKEQLEKA 359
           A DAFLEEL+VRRELADN+C+YQP YDSL+GAW WA+ TL++HA DKREHIY++EQLEK 
Sbjct: 68  AIDAFLEELIVRRELADNYCFYQPHYDSLKGAWAWAQNTLIEHATDKREHIYTREQLEKT 127

Query: 360 QTADRLWNASQLEMVHFGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEIDGRDP 419
            TAD LWNASQLE VH+GKMHGF RMYWAKKILEWTRGPEEALEI +YLNDKYE+DGRDP
Sbjct: 128 LTADPLWNASQLETVHYGKMHGFTRMYWAKKILEWTRGPEEALEISLYLNDKYELDGRDP 187

Query: 420 NGYCGCMWSICGVHDQGWRERPIFGKIRYMNYEGCKRKFDVERYIAYVNKVV 471
           NGY GCMWSICGVHDQGW+ERPIFGKIRYMNY GCKRKFDV++YIAYV+K+V
Sbjct: 188 NGYVGCMWSICGVHDQGWKERPIFGKIRYMNYAGCKRKFDVDKYIAYVDKLV 239