Miyakogusa Predicted Gene

Lj2g3v2002440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002440.1 Non Chatacterized Hit- tr|I3S0V1|I3S0V1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,48.46,1e-17,no
description,Plant lipid transfer protein/hydrophobic protein helical
domain; LIPIDTRNSFER,Plant l,CUFF.38364.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g03310.1                                                       117   3e-27
Glyma05g04180.1                                                        84   4e-17
Glyma17g14620.1                                                        74   5e-14
Glyma05g04180.2                                                        57   6e-09

>Glyma11g03310.1 
          Length = 145

 Score =  117 bits (293), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 5/133 (3%)

Query: 4   STSKVVLLVMGWALMVVIAEAQDLPPCANQLSPCAAYLNSTSXXXXXXXXXXXXXDSTEK 63
           S S  +++V+G  L++ +A  Q  PPCA  LSPC   +NST                T+ 
Sbjct: 5   SMSMPLMVVLGMTLVICLANGQATPPCAKHLSPCLDVMNSTKPPDTCCNPI----KETQS 60

Query: 64  SCFCELALSPSILQGFGINTAQALQLVQLCGVNFDLTSCEASSPVGLPPSSVQPPATPGG 123
           +CFC+L  +P +L+G G   AQAL+L  LCGVNF LT+C+AS+    PPS VQPPAT GG
Sbjct: 61  TCFCQLVSTPGMLEGIGTTIAQALKLANLCGVNFTLTTCKASTSAP-PPSLVQPPATLGG 119

Query: 124 DEGGAGRITFTGL 136
           DEGGA R  FTGL
Sbjct: 120 DEGGASRAAFTGL 132


>Glyma05g04180.1 
          Length = 148

 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 66/122 (54%), Gaps = 6/122 (4%)

Query: 18  MVVIAEAQD--LPPCANQLSPCAAYLNSTSXXXXXXXXXXXXXDSTEKSCFCELALSPSI 75
           M+ +AEAQ      CA +L PC  YLN T                 E +C C +  SP +
Sbjct: 17  MMSMAEAQSGTSADCAQELIPCLDYLNGTINPPSSCCDPLKRTVQNELACLCNIYFSPGL 76

Query: 76  LQGFGINTAQALQLVQLCGVNFDLTSCE-ASSPVGLPPSSVQPPATPGGDEGGAGRITFT 134
           LQ   +   +AL L + CGV  DL+SC+  S+P    P S  PPATPGGD+GGAG +TFT
Sbjct: 77  LQSVNVTVDEALGLSRRCGVTSDLSSCKNGSAPA---PGSRPPPATPGGDKGGAGTVTFT 133

Query: 135 GL 136
           GL
Sbjct: 134 GL 135


>Glyma17g14620.1 
          Length = 151

 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 64/121 (52%), Gaps = 4/121 (3%)

Query: 18  MVVIAEAQD--LPPCANQLSPCAAYLNSTSXXXXXXXXXXXXXDSTEKSCFCELALSPSI 75
           M  +AEAQ      CA +L PC  +LN T+                +  C C +  SP +
Sbjct: 20  MRSLAEAQSGSSTTCAQELIPCVNFLNGTTTPPSSCCDPLKQTVENQLDCLCNIFFSPGL 79

Query: 76  LQGFGINTAQALQLVQLCGVNFDLTSCEASSPVGLPPSSVQPPATPGGDEGGAGRITFTG 135
           LQ F ++  QAL L + CGV   +TSC  ++     P S  PP TPGGD+GGAGR+TFTG
Sbjct: 80  LQSFNVSVDQALALSRRCGVTNGITSC--TNGSAPAPGSGPPPVTPGGDKGGAGRVTFTG 137

Query: 136 L 136
           L
Sbjct: 138 L 138


>Glyma05g04180.2 
          Length = 146

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 5/110 (4%)

Query: 18  MVVIAEAQD--LPPCANQLSPCAAYLNSTSXXXXXXXXXXXXXDSTEKSCFCELALSPSI 75
           M+ +AEAQ      CA +L PC  YLN T                 E +C C +  SP +
Sbjct: 17  MMSMAEAQSGTSADCAQELIPCLDYLNGTINPPSSCCDPLKRTVQNELACLCNIYFSPGL 76

Query: 76  LQGFGINTAQALQLVQLCGVNFDLTSCE---ASSPVGLPPSSVQPPATPG 122
           LQ   +   +AL L + CGV  DL+SC+   A +P   PP    PP  P 
Sbjct: 77  LQSVNVTVDEALGLSRRCGVTSDLSSCKNGSAPAPGSRPPPGKTPPNIPN 126