Miyakogusa Predicted Gene

Lj2g3v2002340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002340.1 Non Chatacterized Hit- tr|C5Z239|C5Z239_SORBI
Putative uncharacterized protein Sb10g000460
OS=Sorghu,36.95,4e-18,seg,NULL,CUFF.38348.1
         (195 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g04250.1                                                       144   7e-35
Glyma17g14700.1                                                       143   1e-34
Glyma11g03340.1                                                       139   3e-33
Glyma12g00760.1                                                       107   8e-24
Glyma09g36600.1                                                       102   3e-22
Glyma04g13660.1                                                        97   1e-20
Glyma06g47680.1                                                        91   1e-18

>Glyma05g04250.1 
          Length = 364

 Score =  144 bits (362), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 115/210 (54%), Gaps = 21/210 (10%)

Query: 3   TTIRKMGDYG-SPCWYDDQVSFMQELESPNXXXXXXXXX----XXXXXXXPCKQEL-EMQ 56
           TT +K+G+Y  SPCWYD+QVSFMQ+LESP                     PCK EL E+Q
Sbjct: 159 TTTQKVGEYDQSPCWYDEQVSFMQDLESPRRNISQTYASYHHHQQQHHHHPCKPELMELQ 218

Query: 57  YNVTRTHDAFLQLPQLESPKLLQS------YGYDHXXXXXXXXXXXXXXXXPXXXXXXXX 110
           YN    HDAFLQLPQLESPK+ QS      YGY+                          
Sbjct: 219 YN-NIPHDAFLQLPQLESPKVTQSSCSVVPYGYESNNNNNGSTLQFSSLTQ---EEQLQY 274

Query: 111 XXXXXXXXXXYGSNN---DQVTDWRVLDKFVASQLSHEQHASKDETSYSN--VAEDQEQF 165
                     YGSN+   DQVTDWRVLDKFVASQLSH       ETSYSN  +    EQ 
Sbjct: 275 CNNQQSHHSLYGSNDHAVDQVTDWRVLDKFVASQLSHNNQDVSKETSYSNAPIFHVAEQI 334

Query: 166 TLLPNGSEKPEINQKYASTTTSSCQIDPWK 195
           ++  NGS+K +++Q+YAST+TSS QID WK
Sbjct: 335 SVAANGSKKEQVSQEYASTSTSSYQIDLWK 364


>Glyma17g14700.1 
          Length = 366

 Score =  143 bits (360), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/208 (46%), Positives = 118/208 (56%), Gaps = 16/208 (7%)

Query: 3   TTIRKMGDYG-SPCWYDDQVSFMQELESPNXXXXXXXXXXXXXXXXPCKQEL-EMQYNVT 60
           TT++K+G+Y  SPCWYD+QVSFMQ+LESP                  CK EL E+QYN  
Sbjct: 160 TTMQKVGEYDQSPCWYDEQVSFMQDLESPRRSISLPYASYHHHHHPSCKPELMELQYN-N 218

Query: 61  RTHDAFLQLPQLESPKLLQS------YGYDHXXXXXXXXXXXXXXXXPXXXXXXXXX-XX 113
             HDAFLQLPQLESPK+ QS      YGY++                             
Sbjct: 219 IPHDAFLQLPQLESPKVTQSACSVVPYGYENNNNNNNNNNGSTLQFSSLTQEEQLQYCNN 278

Query: 114 XXXXXXXYGSNN---DQVTDWRVLDKFVASQLSHE-QHASKDETSYSN--VAEDQEQFTL 167
                  YGSN+   DQVTDWRVLDK+VASQLSH  Q     ETSYSN  +    EQ ++
Sbjct: 279 QQSHHSLYGSNDHAVDQVTDWRVLDKYVASQLSHNNQDVVSKETSYSNAPIFNVTEQVSV 338

Query: 168 LPNGSEKPEINQKYASTTTSSCQIDPWK 195
           + NGS+K +++Q+YAST+TSS QID WK
Sbjct: 339 VANGSKKEQVSQEYASTSTSSYQIDLWK 366


>Glyma11g03340.1 
          Length = 360

 Score =  139 bits (349), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/199 (48%), Positives = 108/199 (54%), Gaps = 29/199 (14%)

Query: 3   TTIRKMGDYGSPCWYDD-QVSFMQELESPNXXXXXXXXXXXXXXXXPCKQELEMQYNVTR 61
           TT+RKMG+Y SPCWYDD  VSFMQELESP+                P K+ELE+Q+N+  
Sbjct: 161 TTVRKMGEYESPCWYDDPAVSFMQELESPS---RISNPYASYHQHYPFKKELELQFNI-- 215

Query: 62  THDAFLQLPQLESPKLLQS-----------YGYDHXXXXXXXXXXXXXXXXPXXXXXXXX 110
            HDAFLQLPQLESPK+ QS           YGY                           
Sbjct: 216 PHDAFLQLPQLESPKVPQSSTSLNCSQVIPYGYGSNNNGNALQSLSL-----TQEEHIKQ 270

Query: 111 XXXXXXXXXXYGSNN---DQVTDWRVLDKFVASQLSHEQHASKDETSYSNVAEDQEQFTL 167
                     YGSN+   D  TDWRVLDKFVASQLSH+QH SK ETSYS VA   EQ  L
Sbjct: 271 HCQQQSLQFPYGSNDQAVDPATDWRVLDKFVASQLSHDQHFSK-ETSYSKVA---EQIKL 326

Query: 168 LPNGSEKPEINQKYASTTT 186
           L NG  K EI Q+ AST+T
Sbjct: 327 LANGCTKTEIGQEMASTST 345


>Glyma12g00760.1 
          Length = 380

 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 96/199 (48%), Gaps = 16/199 (8%)

Query: 3   TTIRKMGDYGSPCWYDDQVSFMQELESPNXXXXXXXXXXXXXXXXPCKQELEMQYNVTRT 62
           TT+RK+ ++ SPCWYDDQV FM +L+SP                 PCKQEL++ Y + R 
Sbjct: 192 TTMRKVSEHDSPCWYDDQVPFMLDLDSPK---QTSQSNLVYQLPYPCKQELDLPYQLPRD 248

Query: 63  HDAFLQLPQLESPKLLQSYGYDHXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXYG 122
           H  FLQLP LESPKLLQS                                        YG
Sbjct: 249 H--FLQLPLLESPKLLQSASAITPNNPMAAYVLDHVNHSTSLLPPSLIQEEQQNFQATYG 306

Query: 123 SNN------DQVTDWRVLDKFVASQLSHEQHASKDETSYSNVAEDQEQFTLLPNGSEKPE 176
           ++N      D V DWRVLDKFVASQLS  Q ASKD   +        QF  L    ++  
Sbjct: 307 NSNSNEQAVDPVIDWRVLDKFVASQLS--QDASKDNI-FQGTDNSNVQFRHL--DKQELV 361

Query: 177 INQKYASTTTSSCQIDPWK 195
           + ++ AST+ SSC ID WK
Sbjct: 362 VPEQNASTSNSSCPIDLWK 380


>Glyma09g36600.1 
          Length = 361

 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 98/201 (48%), Gaps = 33/201 (16%)

Query: 3   TTIRKMGDYGSPCWYDDQVSFMQELESPNXXXXXXXXXXXXXXXXPCKQELEM-QYNVTR 61
           TT+RK+ ++ S CWYD+QVSFMQ+L+SP                 PCK+EL++  Y + R
Sbjct: 186 TTMRKVSEHDSSCWYDEQVSFMQDLDSPK--QTCQSNLVYQQLPYPCKKELDLPPYQLPR 243

Query: 62  THDAFLQLPQLESPKLLQSYGYDHXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXY 121
            H  FLQLP LESPKLLQS                     P                  Y
Sbjct: 244 DH--FLQLPLLESPKLLQS----------------ASAIAPINNPMEGYVLDHQNFQATY 285

Query: 122 GSNN-------DQVTDWRVLDKFVASQLSHEQHASKDETSYSNVAEDQEQFTLLPNGSEK 174
           G+ N       D VTDWRVLDKFVASQLS  Q ASK E  +        QF  L    +K
Sbjct: 286 GNINNSNEQAVDPVTDWRVLDKFVASQLS--QDASK-ENIFQGTDNSSVQFRHL--DKQK 340

Query: 175 PEINQKYASTTTSSCQIDPWK 195
             + ++ AST+ SSC ID WK
Sbjct: 341 LVVPEQNASTSNSSCPIDLWK 361


>Glyma04g13660.1 
          Length = 354

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 95/200 (47%), Gaps = 24/200 (12%)

Query: 3   TTIRKMGDYGSPCWYDDQVSFMQELESPNXXXXXXXXXXXXXXXXPCKQELEMQYNVTRT 62
           TT+RK+ ++ SPCWYDDQVSFMQ+L+SP                 PCK+EL+  Y++   
Sbjct: 172 TTMRKLSEHDSPCWYDDQVSFMQDLDSPK--QSSQPNFPYQQFQYPCKKELDFSYHLP-- 227

Query: 63  HDAFLQLPQLESPKLLQSYGYDHXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXYG 122
               LQLP LE+ KL QS   +                                      
Sbjct: 228 ----LQLP-LENQKLFQSAASNSMTPYGIEENPNAMQPASIMQQVQQQNFQVFGN----N 278

Query: 123 SNNDQVTDWRVLDKFVASQLSHEQHASKDETSYSNVAEDQEQFTLLPNGS-------EKP 175
           SN+ QV DWR LDK+VASQLS E  ASKD  SYSN       F +  N +       +K 
Sbjct: 279 SNDQQVADWRALDKYVASQLSQED-ASKDHNSYSNA---DNIFQVKNNSTIEQLRDLDKE 334

Query: 176 EINQKYASTTTSSCQIDPWK 195
           E   + AST+TSSC ID WK
Sbjct: 335 EKMAENASTSTSSCPIDMWK 354


>Glyma06g47680.1 
          Length = 361

 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 98/208 (47%), Gaps = 38/208 (18%)

Query: 3   TTIRKMGDYGSPCWYDDQVSFMQELESPNXXXXXXXXXXXXXXXXPCKQELEMQYNVTRT 62
           TT+RK+ ++ SPCWYDDQVSFMQ+L+SP                  CK+EL++ Y++   
Sbjct: 177 TTMRKLSEHDSPCWYDDQVSFMQDLDSPKQSSQPNLPYQQFQYS--CKKELDLSYHLP-- 232

Query: 63  HDAFLQLPQLESPKLLQS-------YGYDHXXXXXXXXXXXXXXXXPXXXXXXXXXXXXX 115
               +QLP LE+ KLLQS       YG +                               
Sbjct: 233 ----VQLP-LENQKLLQSASNSMTPYGIEENPNAMQPASSMMQQVQQQNFQAVVFGN--- 284

Query: 116 XXXXXYGSNNDQVTDWRVLDKFVASQLSHEQHASKDETSYSNVAE--------DQEQFTL 167
                  +N+ QVTDWR LDK+VASQLS E  ASKD   YSN           + EQ   
Sbjct: 285 ------NANDQQVTDWRSLDKYVASQLSQED-ASKDHNRYSNTGNIFQVKNNSNIEQLRD 337

Query: 168 LPNGSEKPEINQKYASTTTSSCQIDPWK 195
           L    +K E+  + AST+ SSC I+ WK
Sbjct: 338 L----DKDEMMPENASTSNSSCPINMWK 361