Miyakogusa Predicted Gene

Lj2g3v2002320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002320.1 tr|Q2JIY2|Q2JIY2_SYNJB Pentapeptide repeat family
protein OS=Synechococcus sp. (strain
JA-2-3B'a(2-1,41.54,1e-18,Pentapeptide_4,NULL; seg,NULL; Pentapeptide
repeat-like,NULL; UNCHARACTERIZED,NULL,CUFF.38345.1
         (259 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g03350.1                                                       377   e-105
Glyma11g03350.2                                                       250   9e-67
Glyma01g42000.1                                                       196   2e-50
Glyma04g12540.1                                                        83   3e-16
Glyma11g34350.1                                                        65   1e-10
Glyma11g34350.3                                                        64   1e-10
Glyma11g34350.2                                                        64   1e-10
Glyma06g13640.1                                                        64   2e-10
Glyma18g03970.1                                                        63   3e-10
Glyma04g41210.2                                                        62   6e-10
Glyma04g41210.1                                                        62   6e-10

>Glyma11g03350.1 
          Length = 266

 Score =  377 bits (968), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 183/195 (93%), Positives = 191/195 (97%)

Query: 65  PIVLCQMNSNRDHPQESKKWGKLVSATLAAAVIAFSSDMSALADLNKFEAEIRGEFGIGS 124
           P+V+CQ+NSNRDH QES KWGK+VSATLAAAVIAFSSDMSALADLNKFEAE+RGEFGIGS
Sbjct: 34  PVVVCQINSNRDHRQESTKWGKVVSATLAAAVIAFSSDMSALADLNKFEAEMRGEFGIGS 93

Query: 125 AAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLS 184
           AAQFGSADLRKAVHVNENFRRANFT+ADMRESDFSGSTFNGAYLEKAVAYKANFSGADLS
Sbjct: 94  AAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFSGADLS 153

Query: 185 DTLMDRMVLNEANLTNAILVRTVLTRSDLGGSIIEGADFSDAVLDLTQKLALCKYASGTN 244
           DTLMDRMVLNEANLTNAIL+RTVLTRSDLGG+IIEGADFSDAVLDL QK ALCKYASGTN
Sbjct: 154 DTLMDRMVLNEANLTNAILLRTVLTRSDLGGAIIEGADFSDAVLDLPQKQALCKYASGTN 213

Query: 245 PVTGVSTRVSLGCGN 259
           PVTGVSTRVSLGCGN
Sbjct: 214 PVTGVSTRVSLGCGN 228


>Glyma11g03350.2 
          Length = 199

 Score =  250 bits (639), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 119/127 (93%), Positives = 125/127 (98%)

Query: 65  PIVLCQMNSNRDHPQESKKWGKLVSATLAAAVIAFSSDMSALADLNKFEAEIRGEFGIGS 124
           P+V+CQ+NSNRDH QES KWGK+VSATLAAAVIAFSSDMSALADLNKFEAE+RGEFGIGS
Sbjct: 34  PVVVCQINSNRDHRQESTKWGKVVSATLAAAVIAFSSDMSALADLNKFEAEMRGEFGIGS 93

Query: 125 AAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLS 184
           AAQFGSADLRKAVHVNENFRRANFT+ADMRESDFSGSTFNGAYLEKAVAYKANFSGADLS
Sbjct: 94  AAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFSGADLS 153

Query: 185 DTLMDRM 191
           DTLMDRM
Sbjct: 154 DTLMDRM 160


>Glyma01g42000.1 
          Length = 181

 Score =  196 bits (497), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 103/123 (83%), Positives = 108/123 (87%), Gaps = 7/123 (5%)

Query: 130 SADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMD 189
           SA + KAVHVNENFR ANFT+ADMRESDFSGSTFNGAYLEKAVAYKANF G DLSDTL D
Sbjct: 66  SAYVLKAVHVNENFR-ANFTAADMRESDFSGSTFNGAYLEKAVAYKANFPGVDLSDTLTD 124

Query: 190 RMVLNEANLTNAILVRTVLTRSDLGGSIIEGADFSDAVLDLTQKLALCKYASGTNPVTGV 249
           RMVLNEANL+NAIL+RTVLTRSDLGG+IIEGADFSDAVLDL QK ALCKY      VT V
Sbjct: 125 RMVLNEANLSNAILLRTVLTRSDLGGAIIEGADFSDAVLDLPQKHALCKY------VTRV 178

Query: 250 STR 252
           STR
Sbjct: 179 STR 181


>Glyma04g12540.1 
          Length = 54

 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 45/53 (84%)

Query: 74  NRDHPQESKKWGKLVSATLAAAVIAFSSDMSALADLNKFEAEIRGEFGIGSAA 126
            R    ES KWGK+VSATL A VIAFSSDMS+LADLNKF+AE+RGEFGIGSAA
Sbjct: 1   GRIANAESTKWGKVVSATLVAVVIAFSSDMSSLADLNKFKAEMRGEFGIGSAA 53


>Glyma11g34350.1 
          Length = 251

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 128 FGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTL 187
           +G    R      ++F        D + S    + F GA L  A  + A+ +GADLSD  
Sbjct: 115 YGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGADLSDAD 174

Query: 188 M---DRMVLN--EANLTNAILVRTVLT-RSDLGGSIIEGADFSDAVLDLTQKLALCKYAS 241
           +   D  + N  +ANL+NA L   + T  +   GS I GADF+D  L   Q+  LCK A 
Sbjct: 175 LRNADFSLANVTKANLSNANLEGALATGNTSFKGSNITGADFTDVPLREDQREYLCKVAD 234

Query: 242 GTNPVTGVSTRVSLGC 257
           G NP TG +TR +L C
Sbjct: 235 GVNPTTGNATRDTLFC 250


>Glyma11g34350.3 
          Length = 219

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 128 FGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTL 187
           +G    R      ++F        D + S    + F GA L  A  + A+ +GADLSD  
Sbjct: 83  YGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGADLSDAD 142

Query: 188 M---DRMVLN--EANLTNAILVRTVLT-RSDLGGSIIEGADFSDAVLDLTQKLALCKYAS 241
           +   D  + N  +ANL+NA L   + T  +   GS I GADF+D  L   Q+  LCK A 
Sbjct: 143 LRNADFSLANVTKANLSNANLEGALATGNTSFKGSNITGADFTDVPLREDQREYLCKVAD 202

Query: 242 GTNPVTGVSTRVSLGC 257
           G NP TG +TR +L C
Sbjct: 203 GVNPTTGNATRDTLFC 218


>Glyma11g34350.2 
          Length = 224

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 128 FGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTL 187
           +G    R      ++F        D + S    + F GA L  A  + A+ +GADLSD  
Sbjct: 88  YGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGADLSDAD 147

Query: 188 M---DRMVLN--EANLTNAILVRTVLT-RSDLGGSIIEGADFSDAVLDLTQKLALCKYAS 241
           +   D  + N  +ANL+NA L   + T  +   GS I GADF+D  L   Q+  LCK A 
Sbjct: 148 LRNADFSLANVTKANLSNANLEGALATGNTSFKGSNITGADFTDVPLREDQREYLCKVAD 207

Query: 242 GTNPVTGVSTRVSLGC 257
           G NP TG +TR +L C
Sbjct: 208 GVNPTTGNATRDTLFC 223


>Glyma06g13640.1 
          Length = 239

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 7/128 (5%)

Query: 132 DLRKAVHVNE--NFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMD 189
           DLR+    NE  N +  + ++A M ++ F G+      + KA A  A+F G D S+ ++D
Sbjct: 116 DLRQCDFTNEKTNLKGKSLSAALMSDAKFDGADMTEVVMSKAYAAGASFKGVDFSNAVLD 175

Query: 190 RMVLNEANLTNAILVRTVLTRSDLGGSIIEGADFSDAVLDLTQKLALCKYASGTNPVTGV 249
           R+   +A+L  AI   TVL+ S    + ++ A F D ++       LC     TN   G 
Sbjct: 176 RVNFEKADLEGAIFKNTVLSGSTFDDAKLDNAVFEDTIIGYIDLQKLC-----TNKTIGD 230

Query: 250 STRVSLGC 257
             RV LGC
Sbjct: 231 EWRVELGC 238


>Glyma18g03970.1 
          Length = 222

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 128 FGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTL 187
           +G    R      ++F        D + S    + F GA L  A  + A+ +GADLSD  
Sbjct: 86  YGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGADLSDAD 145

Query: 188 M---DRMVLN--EANLTNAILVRTVLT-RSDLGGSIIEGADFSDAVLDLTQKLALCKYAS 241
           +   D  + N  +ANL+NA L   + T  +   GS + GADF+D  L   Q+  LCK A 
Sbjct: 146 LRNADFSLANVTKANLSNANLEGALATGNTSFRGSNVTGADFTDVPLREDQREYLCKVAD 205

Query: 242 GTNPVTGVSTRVSLGC 257
           G NP TG +TR +L C
Sbjct: 206 GVNPTTGNATRDTLFC 221


>Glyma04g41210.2 
          Length = 240

 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 7/128 (5%)

Query: 132 DLRKAVHVNE--NFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMD 189
           DLR+    +E  N +  + ++A M ++ F G+      + KA A  A+F G D S+ ++D
Sbjct: 117 DLRQCDFTDEKTNLKGKSLSAALMSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVLD 176

Query: 190 RMVLNEANLTNAILVRTVLTRSDLGGSIIEGADFSDAVLDLTQKLALCKYASGTNPVTGV 249
           R+   +A+L  A+   TVL+ S    + ++ A F D ++       LC     TN   G 
Sbjct: 177 RVNFEKADLEGAVFKNTVLSGSTFDDAKLDNAVFEDTIIGYIDLQKLC-----TNKTIGD 231

Query: 250 STRVSLGC 257
             RV LGC
Sbjct: 232 EWRVELGC 239


>Glyma04g41210.1 
          Length = 240

 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 7/128 (5%)

Query: 132 DLRKAVHVNE--NFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMD 189
           DLR+    +E  N +  + ++A M ++ F G+      + KA A  A+F G D S+ ++D
Sbjct: 117 DLRQCDFTDEKTNLKGKSLSAALMSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVLD 176

Query: 190 RMVLNEANLTNAILVRTVLTRSDLGGSIIEGADFSDAVLDLTQKLALCKYASGTNPVTGV 249
           R+   +A+L  A+   TVL+ S    + ++ A F D ++       LC     TN   G 
Sbjct: 177 RVNFEKADLEGAVFKNTVLSGSTFDDAKLDNAVFEDTIIGYIDLQKLC-----TNKTIGD 231

Query: 250 STRVSLGC 257
             RV LGC
Sbjct: 232 EWRVELGC 239