Miyakogusa Predicted Gene

Lj2g3v2001370.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2001370.1 tr|G7K4X7|G7K4X7_MEDTR ETHE1 protein
mitochondrial OS=Medicago truncatula GN=MTR_5g097770 PE=4
SV=1,68.97,0.000000000000003,MutS_V,DNA mismatch repair protein MutS,
C-terminal; MUTS HOMOLOG 4, MSH4,NULL; DNA MISMATCH REPAIR
,CUFF.38315.1
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g03750.1                                                       222   7e-59

>Glyma11g03750.1 
          Length = 759

 Score =  222 bits (566), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 105/127 (82%), Positives = 117/127 (92%), Gaps = 1/127 (0%)

Query: 1   MENMAELATIYPNVKILHFHVDLKNNHLDFK-FQLKEGPKHIPHYGLLLAEVAGLPSPVI 59
           MEN++EL T+YPNVKILHF V+LKNNHLDFK FQLKEG K IPHYGLLLAEVAGLPS V+
Sbjct: 631 MENISELVTMYPNVKILHFDVELKNNHLDFKVFQLKEGSKRIPHYGLLLAEVAGLPSSVV 690

Query: 60  ENARMITSRISEKEMRRMKVNCLQYHSIQRAYHVAQRLLCLKYSNQDEDTIRQALRNLKE 119
           E ARMITSRISEKE++RM+VNCLQ+HSIQ+AYHVAQRLLCLKY NQDEDTIRQALRNLKE
Sbjct: 691 ETARMITSRISEKEVKRMEVNCLQHHSIQKAYHVAQRLLCLKYCNQDEDTIRQALRNLKE 750

Query: 120 TCLNHKL 126
           +C+  KL
Sbjct: 751 SCIKEKL 757