Miyakogusa Predicted Gene

Lj2g3v1989100.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1989100.2 tr|A9TEH6|A9TEH6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_169610,52.48,0.0000000000005,seg,NULL;
coiled-coil,NULL,CUFF.38297.2
         (307 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g41420.1                                                       332   3e-91
Glyma01g41420.2                                                       275   4e-74
Glyma01g41410.1                                                       124   1e-28
Glyma11g04010.1                                                       110   2e-24

>Glyma01g41420.1 
          Length = 325

 Score =  332 bits (851), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 177/295 (60%), Positives = 200/295 (67%), Gaps = 40/295 (13%)

Query: 13  GIRIENPFTLKVGQVFTXXXXXXXXXXXXXRPLNLGAIPMLNEVMSATRGATDAFSGVSR 72
            IRIENPF+LKVGQVFT             RPLNLGAIPMLN+VMSATRGATDAFSGVSR
Sbjct: 65  AIRIENPFSLKVGQVFTGFGIGCGVGIGVGRPLNLGAIPMLNQVMSATRGATDAFSGVSR 124

Query: 73  HVNSSLKKFGAKNIEVXXXXXXXXXXXXXXXLAVKPGVLNQIQSCVAVAVTKMMMKFGLT 132
           HVN+SL+K GAKNIEV               LAVKP VLNQIQS +   +TK+M K GL+
Sbjct: 125 HVNTSLRKLGAKNIEVGIGCGVGFGHGFGVGLAVKPVVLNQIQSSLVDVMTKVMTKIGLS 184

Query: 133 PSLPFSQSAIPASLQSATGTFNTNKISAGSMVQLATRSTDHISQSPAGSQPVQIGSAFEN 192
           P+LPFSQ                                D +SQ   GS+PVQIGS FEN
Sbjct: 185 PNLPFSQ-------------------------------VDQVSQGLPGSRPVQIGSDFEN 213

Query: 193 TALKGTSVDSALKGTSVDSAFGSRTEKVLNNFLQSPVLKGEGGGSDEAAKRLQSENKILQ 252
                    + L+ T+VDSAFGSRTEKV++NFLQ+P+LKGEGGG DEA  RLQSE  +LQ
Sbjct: 214 ---------NPLRVTAVDSAFGSRTEKVISNFLQNPLLKGEGGGLDEAVGRLQSERTMLQ 264

Query: 253 MVLKHQQIIEELVEENEKLRQILVEDLKVPSSKLHASHSGRMRNTLPCTDCFECR 307
           MVLKHQQIIEELVEENE+LR+IL+EDLK+PSSKL AS SGR RN  PCTDCFECR
Sbjct: 265 MVLKHQQIIEELVEENERLRRILMEDLKIPSSKLEASSSGRNRNRSPCTDCFECR 319


>Glyma01g41420.2 
          Length = 243

 Score =  275 bits (703), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/227 (63%), Positives = 166/227 (73%), Gaps = 9/227 (3%)

Query: 14  IRIENPFTLKVGQVFTXXXXXXXXXXXXXRPLNLGAIPMLNEVMSATRGATDAFSGVSRH 73
           IRIENPF+LKVGQVFT             RPLNLGAIPMLN+VMSATRGATDAFSGVSRH
Sbjct: 13  IRIENPFSLKVGQVFTGFGIGCGVGIGVGRPLNLGAIPMLNQVMSATRGATDAFSGVSRH 72

Query: 74  VNSSLKKFGAKNIEVXXXXXXXXXXXXXXXLAVKPGVLNQIQSCVAVAVTKMMMKFGLTP 133
           VN+SL+K GAKNIEV               LAVKP VLNQIQS +   +TK+M K GL+P
Sbjct: 73  VNTSLRKLGAKNIEVGIGCGVGFGHGFGVGLAVKPVVLNQIQSSLVDVMTKVMTKIGLSP 132

Query: 134 SLPFSQSAIPASLQSATGTFNTNKISAGSMVQLATRSTDHISQSPAGSQPVQIGSAFENT 193
           +LPFSQ A P SLQSA  T NTN+ SAGSM+QLAT+S D +SQ   GS+PVQIGS FEN 
Sbjct: 133 NLPFSQGAFPPSLQSAASTVNTNQSSAGSMMQLATKSVDQVSQGLPGSRPVQIGSDFEN- 191

Query: 194 ALKGTSVDSALKGTSVDSAFGSRTEKVLNNFLQSPVLKGEGGGSDEA 240
                   + L+ T+VDSAFGSRTEKV++NFLQ+P+LKGEGGG DEA
Sbjct: 192 --------NPLRVTAVDSAFGSRTEKVISNFLQNPLLKGEGGGLDEA 230


>Glyma01g41410.1 
          Length = 215

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 129/254 (50%), Gaps = 68/254 (26%)

Query: 44  PLNLGAIPMLNEVMSATRGATDAFSGVSRHVNSSLKKFGAKNIE-VXXXXXXXXXXXXXX 102
           P    AIP L++VMS T+GATDAF GVS    +S +K G  +I  +              
Sbjct: 15  PQKTSAIPTLDQVMSGTKGATDAFYGVS----NSFRKLGTSSIPGMAVGYGIGFSHGFGL 70

Query: 103 XLAVKPGVLNQIQSCVAVAVTKMMMKFGLTPSLPFSQSAIP-------------ASLQSA 149
            L+++ GV NQ+QS +A  +TKM+   GL P LPF Q A+P             + +Q A
Sbjct: 71  GLSMRSGV-NQLQSSLAEPMTKMI---GLIPGLPFGQRALPMPTSSKSRQISAESIMQRA 126

Query: 150 TGTFNTNKISAGSMVQLATRSTDHISQSPAGSQPVQIGSAFENTALKGTSVDSALKGTSV 209
           T +F+  +IS  SM+QLA++S   ISQ   GSQP +I SAF+N  LK  +VDSA      
Sbjct: 127 TKSFD--QISQESMMQLASKSASQISQGLVGSQPTKIDSAFDNKVLKRAAVDSASH---- 180

Query: 210 DSAFGSRTEKVLNNFLQSPVLKGEGGGSDEAAKRLQSENKILQMVLKHQQIIEELVEENE 269
                ++TEKV+                                  K QQII+ELVEENE
Sbjct: 181 -----TQTEKVM----------------------------------KQQQIIDELVEENE 201

Query: 270 KLRQIL-VEDLKVP 282
           KLRQIL   +LK+P
Sbjct: 202 KLRQILQANNLKIP 215


>Glyma11g04010.1 
          Length = 109

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/95 (62%), Positives = 68/95 (71%), Gaps = 8/95 (8%)

Query: 45  LNLGAIPMLNEVMSATRGATDAFSGVSRHVNSSLKKFGAKNIEVXXXXXXXXXXXXXXXL 104
            ++GAIPMLN+VMSATRGATDAFSGVSRHVN+SL+K GA N+E                L
Sbjct: 13  FHVGAIPMLNQVMSATRGATDAFSGVSRHVNTSLRKLGANNVE--------VGVGCGVGL 64

Query: 105 AVKPGVLNQIQSCVAVAVTKMMMKFGLTPSLPFSQ 139
           AVKP VLNQIQSC    +TKMM K GL+PSL FS+
Sbjct: 65  AVKPVVLNQIQSCFVDVMTKMMTKIGLSPSLAFSR 99