Miyakogusa Predicted Gene

Lj2g3v1989080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1989080.1 tr|C1EF35|C1EF35_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_87955
,44.95,6e-19,rplS_bact: ribosomal protein L19,Ribosomal protein L19;
seg,NULL; Translation proteins SH3-like doma,CUFF.38298.1
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g04020.1                                                       243   8e-65
Glyma01g41400.1                                                       241   4e-64
Glyma11g04020.2                                                       241   6e-64
Glyma01g41400.2                                                       238   4e-63
Glyma08g34520.1                                                       104   6e-23
Glyma18g08770.1                                                       102   2e-22

>Glyma11g04020.1 
          Length = 213

 Score =  243 bits (621), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 144/229 (62%), Positives = 154/229 (67%), Gaps = 19/229 (8%)

Query: 1   MASQVFLQQGLLLFAPNQCSPTKLGVSSCLGSRNFPLIS---STSISWRCNNPLSAKPSF 57
           MASQV LQQ L  FAP    P+         SRN  LIS   ST ISWRC  PL AKPSF
Sbjct: 1   MASQVLLQQAL--FAPKLSFPS--------SSRNVALISRVPSTPISWRCT-PLIAKPSF 49

Query: 58  XXXXXXXXXXXXXXXGEVPEAEGSVDQVPEDGEAELASDSEVEQPKPPRKQRVKLGDVMG 117
                           +VP    +VD+V E GE E  SDSE   PK PRK RVKLGDVMG
Sbjct: 50  AVRADSNVEGAGEATEDVPSY--NVDEVSE-GEGEQVSDSEA--PKSPRKPRVKLGDVMG 104

Query: 118 ILNQRAIEASESMRPTPEIRTGDVVEIKLEVPENKRRLSIYKGIVISRQNXXXXXXXXXX 177
           ILNQRAIEASE  RPTP+IRTGD+VEIKLEVPENKRRLSIYKGIVIS+QN          
Sbjct: 105 ILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIR 164

Query: 178 XXXXXXXVEIVFPIYSPNIKEIKVVNHRKVRRARLYYLRDKLPRFSTFK 226
                  VEIVFP+YSPNIKEI+VV+HRKVRRARLYYLRDKLPRFSTFK
Sbjct: 165 RIIAGTGVEIVFPVYSPNIKEIRVVSHRKVRRARLYYLRDKLPRFSTFK 213


>Glyma01g41400.1 
          Length = 259

 Score =  241 bits (615), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/229 (62%), Positives = 154/229 (67%), Gaps = 19/229 (8%)

Query: 1   MASQVFLQQGLLLFAPNQCSPTKLGVSSCLGSRNFPLIS---STSISWRCNNPLSAKPSF 57
           MASQV LQQ L  FAP    P+         SRN  LIS   ST ISWRC  PL AKPSF
Sbjct: 47  MASQVLLQQAL--FAPKLSFPS--------SSRNVALISRVPSTPISWRCT-PLIAKPSF 95

Query: 58  XXXXXXXXXXXXXXXGEVPEAEGSVDQVPEDGEAELASDSEVEQPKPPRKQRVKLGDVMG 117
                           +VP    + ++V E GEAE  SDSE   PK PRK RVKLGD+MG
Sbjct: 96  VVRADTNLDGGGEATEDVPS--DNAEKVSE-GEAEQVSDSEA--PKSPRKPRVKLGDIMG 150

Query: 118 ILNQRAIEASESMRPTPEIRTGDVVEIKLEVPENKRRLSIYKGIVISRQNXXXXXXXXXX 177
           ILNQRAIEASE  RPTP+IRTGD+VEIKLEVPENKRRLSIYKGIVIS+QN          
Sbjct: 151 ILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIR 210

Query: 178 XXXXXXXVEIVFPIYSPNIKEIKVVNHRKVRRARLYYLRDKLPRFSTFK 226
                  VEIVFP+YSPNIKEIKVV+HRKVRRARLYYLRDKLPRFSTFK
Sbjct: 211 RIIAGTGVEIVFPVYSPNIKEIKVVSHRKVRRARLYYLRDKLPRFSTFK 259


>Glyma11g04020.2 
          Length = 212

 Score =  241 bits (614), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 143/229 (62%), Positives = 153/229 (66%), Gaps = 20/229 (8%)

Query: 1   MASQVFLQQGLLLFAPNQCSPTKLGVSSCLGSRNFPLIS---STSISWRCNNPLSAKPSF 57
           MASQV LQ    LFAP    P+         SRN  LIS   ST ISWRC  PL AKPSF
Sbjct: 1   MASQVLLQA---LFAPKLSFPS--------SSRNVALISRVPSTPISWRCT-PLIAKPSF 48

Query: 58  XXXXXXXXXXXXXXXGEVPEAEGSVDQVPEDGEAELASDSEVEQPKPPRKQRVKLGDVMG 117
                           +VP    +VD+V E GE E  SDSE   PK PRK RVKLGDVMG
Sbjct: 49  AVRADSNVEGAGEATEDVPSY--NVDEVSE-GEGEQVSDSEA--PKSPRKPRVKLGDVMG 103

Query: 118 ILNQRAIEASESMRPTPEIRTGDVVEIKLEVPENKRRLSIYKGIVISRQNXXXXXXXXXX 177
           ILNQRAIEASE  RPTP+IRTGD+VEIKLEVPENKRRLSIYKGIVIS+QN          
Sbjct: 104 ILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIR 163

Query: 178 XXXXXXXVEIVFPIYSPNIKEIKVVNHRKVRRARLYYLRDKLPRFSTFK 226
                  VEIVFP+YSPNIKEI+VV+HRKVRRARLYYLRDKLPRFSTFK
Sbjct: 164 RIIAGTGVEIVFPVYSPNIKEIRVVSHRKVRRARLYYLRDKLPRFSTFK 212


>Glyma01g41400.2 
          Length = 258

 Score =  238 bits (607), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/229 (62%), Positives = 153/229 (66%), Gaps = 20/229 (8%)

Query: 1   MASQVFLQQGLLLFAPNQCSPTKLGVSSCLGSRNFPLIS---STSISWRCNNPLSAKPSF 57
           MASQV LQ    LFAP    P+         SRN  LIS   ST ISWRC  PL AKPSF
Sbjct: 47  MASQVLLQA---LFAPKLSFPS--------SSRNVALISRVPSTPISWRCT-PLIAKPSF 94

Query: 58  XXXXXXXXXXXXXXXGEVPEAEGSVDQVPEDGEAELASDSEVEQPKPPRKQRVKLGDVMG 117
                           +VP    + ++V E GEAE  SDSE   PK PRK RVKLGD+MG
Sbjct: 95  VVRADTNLDGGGEATEDVPS--DNAEKVSE-GEAEQVSDSEA--PKSPRKPRVKLGDIMG 149

Query: 118 ILNQRAIEASESMRPTPEIRTGDVVEIKLEVPENKRRLSIYKGIVISRQNXXXXXXXXXX 177
           ILNQRAIEASE  RPTP+IRTGD+VEIKLEVPENKRRLSIYKGIVIS+QN          
Sbjct: 150 ILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIR 209

Query: 178 XXXXXXXVEIVFPIYSPNIKEIKVVNHRKVRRARLYYLRDKLPRFSTFK 226
                  VEIVFP+YSPNIKEIKVV+HRKVRRARLYYLRDKLPRFSTFK
Sbjct: 210 RIIAGTGVEIVFPVYSPNIKEIKVVSHRKVRRARLYYLRDKLPRFSTFK 258


>Glyma08g34520.1 
          Length = 231

 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 80/120 (66%), Gaps = 4/120 (3%)

Query: 104 PPRKQRVKLG----DVMGILNQRAIEASESMRPTPEIRTGDVVEIKLEVPENKRRLSIYK 159
           PPR +  +L      +M IL++ A+E     R  P+I+ G +V++K+EVPENKRR+SI K
Sbjct: 107 PPRIKFKRLDKTARHIMQILDKEAVEDVRGQREIPDIKPGYIVQLKVEVPENKRRVSIIK 166

Query: 160 GIVISRQNXXXXXXXXXXXXXXXXXVEIVFPIYSPNIKEIKVVNHRKVRRARLYYLRDKL 219
           GIVI+R+N                 +E +FP+YSPNIKEIKV++ ++VRRA+LYYLR+++
Sbjct: 167 GIVIARRNAGLNTTFRIRRQVAGVGIESLFPLYSPNIKEIKVLDKKRVRRAKLYYLRERM 226


>Glyma18g08770.1 
          Length = 236

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 73/106 (68%)

Query: 114 DVMGILNQRAIEASESMRPTPEIRTGDVVEIKLEVPENKRRLSIYKGIVISRQNXXXXXX 173
            +M IL++ A+E     R  P+I+ G +V++K+EVPENKRR+SI KGIVI+R+N      
Sbjct: 126 HIMQILDKEAVEEVRGQREIPDIKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLNTT 185

Query: 174 XXXXXXXXXXXVEIVFPIYSPNIKEIKVVNHRKVRRARLYYLRDKL 219
                      +E +FP YSPNIKEIKV++ ++VRRA+LYYLR+++
Sbjct: 186 FRIRRQVAGVGIESLFPRYSPNIKEIKVLDKKRVRRAKLYYLRERM 231