Miyakogusa Predicted Gene

Lj2g3v1988760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1988760.1 tr|A9SJC1|A9SJC1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165246,25,8e-18,
,CUFF.38273.1
         (357 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g16100.1                                                       447   e-126
Glyma05g05760.1                                                       446   e-125
Glyma05g05760.2                                                       444   e-125
Glyma19g26990.1                                                       349   3e-96

>Glyma17g16100.1 
          Length = 369

 Score =  447 bits (1151), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/349 (65%), Positives = 273/349 (78%), Gaps = 7/349 (2%)

Query: 10  LTQATAMALNPPKSQRGLNKPKCKQCGNVARSRCPYEQCKRCCSRNENPCHIHV-KTNST 68
           L         PPKSQRG NKPKCKQCGNVARSRCPYE CK CCSRN+NPCHIHV K NST
Sbjct: 27  LGVGVGAVPTPPKSQRGHNKPKCKQCGNVARSRCPYECCKSCCSRNQNPCHIHVLKANST 86

Query: 69  LPDKLPSSFGAPLDQQSLETSQSATASRVASLRQLSNNFAQFNNLNISLRSKKPLTIKDA 128
            PDK PSS  +PLDQQSL+  QS TA RVASLRQLSN+FAQFNNL++SLRSKKPLT KDA
Sbjct: 87  FPDKAPSSGASPLDQQSLDPPQS-TAGRVASLRQLSNSFAQFNNLHLSLRSKKPLTRKDA 145

Query: 129 ATINEWRLSKLKEYKERNIDVENETFDRYMQNVELLEEVLSVKSVENNMTSASESPTTSM 188
           A INEWR +K+KEYKERN++VENE FDRYMQNV+LLEEVL+VKS++ N+ SA ES  T+M
Sbjct: 146 AAINEWRFAKIKEYKERNVEVENEAFDRYMQNVDLLEEVLAVKSLDENVPSALESNPTTM 205

Query: 189 ENNNEMMTTGLKLHLRSNSFRSDSLRMRIQQFVDKGLHRLEKFAVDDDINKPIDEEPSEV 248
           E +NE M  GLKL LRSNS RSD LRMRIQQ VD+GL +L+K AVD DIN+ ID+E ++ 
Sbjct: 206 E-SNEAMIPGLKLQLRSNSMRSDGLRMRIQQIVDEGLKKLKKSAVDGDINESIDDESNKA 264

Query: 249 SKRPKSCSDERLSAISDLIDKINKARSEEDLNSCLEMKSQLFNLEVDSGSIEILDHETPE 308
           S+R K    ERLSAISDL++KINKAR+EEDL  CLEMK+QLFNL+  +   ++ D+E  E
Sbjct: 265 SERGKGI--ERLSAISDLMEKINKARTEEDLKPCLEMKTQLFNLDEGASVKDLQDNEMHE 322

Query: 309 NEIAKSESTSAEELDYSSPKLVVTAEVDQDTLNTVDRYLSSLEQHVEEL 357
           NE   ++   AE LDYS PK V T E+D +TLNT+D++ S+  Q +E+L
Sbjct: 323 NETVVTDVVPAEGLDYSLPKFVTTTEIDLETLNTIDKHFST--QDIEQL 369


>Glyma05g05760.1 
          Length = 364

 Score =  446 bits (1148), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/369 (63%), Positives = 277/369 (75%), Gaps = 17/369 (4%)

Query: 1   MAAPNNT---------KDLTQATAMALNPPKSQRGLNKPKCKQCGNVARSRCPYEQCKRC 51
           MA PNN+           L      A  PPKSQRG NKPKCKQCGNVARSRCPYE CK C
Sbjct: 1   MATPNNSNINNATAKPGTLGVGVGAAPTPPKSQRGHNKPKCKQCGNVARSRCPYECCKSC 60

Query: 52  CSRNENPCHIHV-KTNSTLPDKLPSSFGAPLDQQSLETS--QSATASRVASLRQLSNNFA 108
           CSRN+NPCHIHV K NST PDK  SS  +PLDQQSL+    QS +A RVASLRQLSN+FA
Sbjct: 61  CSRNQNPCHIHVLKANSTFPDKASSSGASPLDQQSLDPHPPQSTSAGRVASLRQLSNSFA 120

Query: 109 QFNNLNISLRSKKPLTIKDAATINEWRLSKLKEYKERNIDVENETFDRYMQNVELLEEVL 168
           QFNNL++SLRSKKPLT KDAA+INEWR +K+KEYKERN++VENE FDRYMQNV+LLEEVL
Sbjct: 121 QFNNLHLSLRSKKPLTRKDAASINEWRFAKIKEYKERNVEVENEAFDRYMQNVDLLEEVL 180

Query: 169 SVKSVENNMTSASESPTTSMENNNEMMTTGLKLHLRSNSFRSDSLRMRIQQFVDKGLHRL 228
           +VKS++ N+ SA ES  T ME +NE M  G+KL LRSNS RSD LRMRIQQ V++GL +L
Sbjct: 181 AVKSLDANVPSALESNATPME-SNEAMIPGIKLQLRSNSMRSDGLRMRIQQIVNEGLKKL 239

Query: 229 EKFAVDDDINKPIDEEPSEVSKRPKSCSDERLSAISDLIDKINKARSEEDLNSCLEMKSQ 288
           EK AVD DIN+ ID E +E SKR K    ERLSAISDL+DKINKAR+EEDL  CLEMK+Q
Sbjct: 240 EKSAVDGDINESIDGESNEASKRGKGI--ERLSAISDLMDKINKARTEEDLKPCLEMKTQ 297

Query: 289 LFNLEVDSGSIEILDHETPENEIAKSESTSAEELDYSSPKLVVTAEVDQDTLNTVDRYLS 348
           LFNL+  S + ++ D+E   NE A+S+    E LDYS PK V   E+D + L+T+D++ S
Sbjct: 298 LFNLDEGSSAKDLQDNEMHANETAESDVVQTEGLDYSLPKFVTITEIDLEVLHTIDKHFS 357

Query: 349 SLEQHVEEL 357
           +  Q +E+L
Sbjct: 358 T--QDIEQL 364


>Glyma05g05760.2 
          Length = 363

 Score =  444 bits (1142), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/368 (63%), Positives = 276/368 (75%), Gaps = 16/368 (4%)

Query: 1   MAAPNNT---------KDLTQATAMALNPPKSQRGLNKPKCKQCGNVARSRCPYEQCKRC 51
           MA PNN+           L      A  PPKSQRG NKPKCKQCGNVARSRCPYE CK C
Sbjct: 1   MATPNNSNINNATAKPGTLGVGVGAAPTPPKSQRGHNKPKCKQCGNVARSRCPYECCKSC 60

Query: 52  CSRNENPCHIHV-KTNSTLPDKLPSSFGAPLDQQSLETSQ-SATASRVASLRQLSNNFAQ 109
           CSRN+NPCHIHV K NST PDK  SS  +PLDQQSL+     +TA RVASLRQLSN+FAQ
Sbjct: 61  CSRNQNPCHIHVLKANSTFPDKASSSGASPLDQQSLDPHPPQSTAGRVASLRQLSNSFAQ 120

Query: 110 FNNLNISLRSKKPLTIKDAATINEWRLSKLKEYKERNIDVENETFDRYMQNVELLEEVLS 169
           FNNL++SLRSKKPLT KDAA+INEWR +K+KEYKERN++VENE FDRYMQNV+LLEEVL+
Sbjct: 121 FNNLHLSLRSKKPLTRKDAASINEWRFAKIKEYKERNVEVENEAFDRYMQNVDLLEEVLA 180

Query: 170 VKSVENNMTSASESPTTSMENNNEMMTTGLKLHLRSNSFRSDSLRMRIQQFVDKGLHRLE 229
           VKS++ N+ SA ES  T ME +NE M  G+KL LRSNS RSD LRMRIQQ V++GL +LE
Sbjct: 181 VKSLDANVPSALESNATPME-SNEAMIPGIKLQLRSNSMRSDGLRMRIQQIVNEGLKKLE 239

Query: 230 KFAVDDDINKPIDEEPSEVSKRPKSCSDERLSAISDLIDKINKARSEEDLNSCLEMKSQL 289
           K AVD DIN+ ID E +E SKR K    ERLSAISDL+DKINKAR+EEDL  CLEMK+QL
Sbjct: 240 KSAVDGDINESIDGESNEASKRGKGI--ERLSAISDLMDKINKARTEEDLKPCLEMKTQL 297

Query: 290 FNLEVDSGSIEILDHETPENEIAKSESTSAEELDYSSPKLVVTAEVDQDTLNTVDRYLSS 349
           FNL+  S + ++ D+E   NE A+S+    E LDYS PK V   E+D + L+T+D++ S+
Sbjct: 298 FNLDEGSSAKDLQDNEMHANETAESDVVQTEGLDYSLPKFVTITEIDLEVLHTIDKHFST 357

Query: 350 LEQHVEEL 357
             Q +E+L
Sbjct: 358 --QDIEQL 363


>Glyma19g26990.1 
          Length = 295

 Score =  349 bits (896), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 187/303 (61%), Positives = 227/303 (74%), Gaps = 19/303 (6%)

Query: 58  PCHIH---VKTNSTLPDKLPSSFGAPLDQQSLETSQSATASRVASLRQLSNNFAQFNNLN 114
           PC +    +K NST PDK PSS  +PL+QQSL+  QS +A R ASLRQLSN+FAQFNNL+
Sbjct: 9   PCLMVNAVLKANSTFPDKAPSSGASPLEQQSLDPPQSTSAGRFASLRQLSNSFAQFNNLH 68

Query: 115 ISLRSKKPLTIKDAATINEWRLSKLKEYKERNIDVENETFDRYMQNVELLEEVLSVKSVE 174
           +SLRSKKPLT KDAA INEWR +K+KEYKERN++VENE FDRYMQNV+LLEEVL+VKS++
Sbjct: 69  LSLRSKKPLTRKDAAAINEWRFAKIKEYKERNVEVENEAFDRYMQNVDLLEEVLAVKSLD 128

Query: 175 NNMTSASESPTTSMENNNEMMTTGLKLHLRSNSFRSDSLRMRIQQFVDKGLHRLEKFAVD 234
            N+ SA ES  T+ME +NE M  GLKL LRSNS RSD LRMRIQQ VD+GL +LEK AVD
Sbjct: 129 ENVPSALESNPTTME-SNEAMIPGLKLQLRSNSMRSDGLRMRIQQIVDEGLKKLEKSAVD 187

Query: 235 DDINKPIDEEPSEVSKRPKSCSDERLSAISDLIDKINKARSEEDLNSCLEMKSQLFNLEV 294
            DIN+ ID+E ++ S+R K    ERLSAISDL+DKINKAR+EEDL  CLEMK+QLFNL+ 
Sbjct: 188 GDINESIDDESNKASERGKGI--ERLSAISDLMDKINKARTEEDLKPCLEMKTQLFNLD- 244

Query: 295 DSGSIEILDHETPENEIAKSESTSAEELDYSSPKLVVTAEVDQDTLNTVDRYLSSLEQHV 354
                     E   NE    +   AE LDYS PK V T E+D +TLNT+D++ S+  Q +
Sbjct: 245 ----------EGANNETVVIDVVPAEGLDYSLPKFVTTTEIDLETLNTIDKHFST--QDI 292

Query: 355 EEL 357
           E+L
Sbjct: 293 EQL 295