Miyakogusa Predicted Gene

Lj2g3v1988570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1988570.1 tr|A9TLF2|A9TLF2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_147386,47.41,2e-18,FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.38268.1
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g41140.1                                                       246   7e-66
Glyma11g04290.1                                                       233   5e-62
Glyma06g09360.1                                                        96   2e-20
Glyma04g09230.1                                                        95   3e-20
Glyma08g03550.2                                                        93   1e-19
Glyma05g36070.1                                                        92   3e-19

>Glyma01g41140.1 
          Length = 1324

 Score =  246 bits (628), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 115/152 (75%), Positives = 123/152 (80%), Gaps = 1/152 (0%)

Query: 1    MLLADLSVTLLMLLQFYWXXXXXXXXXXXXXXXXXXXXXXXGLNALFSKEPRRASLSRVY 60
            MLLADLSVTLLMLLQFYW                       GLNALFSKEPRRASLSRVY
Sbjct: 1173 MLLADLSVTLLMLLQFYWIALAAFLSVLLILPLSLLSPFPAGLNALFSKEPRRASLSRVY 1232

Query: 61   ALWSATSLSNIGVAFICCLVHYAVSHLH-PDEASTRSVKREDDKCWLLPVILFLFKSVQV 119
            +LW+ATSLSNIGVAFICCL+HYA+SH H PDE STR+VKREDDKCWLLP+ILFLFKS+Q 
Sbjct: 1233 SLWNATSLSNIGVAFICCLLHYALSHFHHPDETSTRNVKREDDKCWLLPIILFLFKSIQA 1292

Query: 120  RLVNWHIANLEIQDFSLFCPDPDAFWAHESGL 151
            R VNWHIANLEI+DFSLFCPDPDAFWAHE GL
Sbjct: 1293 RFVNWHIANLEIEDFSLFCPDPDAFWAHEPGL 1324


>Glyma11g04290.1 
          Length = 1325

 Score =  233 bits (594), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 114/152 (75%), Positives = 123/152 (80%), Gaps = 1/152 (0%)

Query: 1    MLLADLSVTLLMLLQFYWXXXXXXXXXXXXXXXXXXXXXXXGLNALFSKEPRRASLSRVY 60
            MLLADLSVTLLMLLQFYW                       GLNALFSKEP RASLSRVY
Sbjct: 1174 MLLADLSVTLLMLLQFYWIALAAFLSVLLILPLSLLSPFPAGLNALFSKEPSRASLSRVY 1233

Query: 61   ALWSATSLSNIGVAFICCLVHYAVSHL-HPDEASTRSVKREDDKCWLLPVILFLFKSVQV 119
            ALW+ATSLSNIGVAFICCL+HY++SH  HPDEASTR+VKREDDKCWLLP+ILFLFKSVQ 
Sbjct: 1234 ALWNATSLSNIGVAFICCLLHYSLSHFYHPDEASTRNVKREDDKCWLLPIILFLFKSVQA 1293

Query: 120  RLVNWHIANLEIQDFSLFCPDPDAFWAHESGL 151
            R VNWHIANLE++D+SLFCPDPDAFWAHE GL
Sbjct: 1294 RFVNWHIANLEMEDYSLFCPDPDAFWAHEPGL 1325


>Glyma06g09360.1 
          Length = 1271

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 7/109 (6%)

Query: 42   GLNALFSKEPRR-ASLSRVYALWSATSLSNIGVAFICCLVHY----AVSHLHPDEASTRS 96
            G+NALFS  PRR A L+R+YALW+ TS  N+ VAF+C  +HY    + S  HP      S
Sbjct: 1163 GINALFSHGPRRSAGLARLYALWNLTSFMNVVVAFLCGYIHYNSQSSSSKRHP-SIQPWS 1221

Query: 97   VKREDDKCWLLPVILFLFKSVQVRLVNWHIANLEIQDFSLFCPDPDAFW 145
            +  E +  W+ P  L L K  Q +L+NWH+ANLEIQD SL+  D + FW
Sbjct: 1222 IMDESE-WWIFPAGLVLCKLFQSQLINWHVANLEIQDRSLYSNDFELFW 1269


>Glyma04g09230.1 
          Length = 1407

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 7/109 (6%)

Query: 42   GLNALFSKEPRR-ASLSRVYALWSATSLSNIGVAFICCLVHY----AVSHLHPDEASTRS 96
            G+NALFS  PRR A L+R+YALW+ TS  N+ VAF+C  +HY    + S  HP      S
Sbjct: 1299 GINALFSHGPRRSAGLARLYALWNLTSFINVVVAFLCGYIHYNSQSSSSKRHP-SIQPWS 1357

Query: 97   VKREDDKCWLLPVILFLFKSVQVRLVNWHIANLEIQDFSLFCPDPDAFW 145
            +  E +  W+ P  L L K  Q +L+NWH+ANLEIQD SL+  D + FW
Sbjct: 1358 IMDESE-WWIFPAGLVLCKLFQSQLINWHVANLEIQDRSLYSNDFELFW 1405


>Glyma08g03550.2 
          Length = 1209

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 1    MLLADLSVTLLMLLQFYWXXXXXXXXXXXXXXXXXXXXXXXGLNALFSKEPRR-ASLSRV 59
            +LL D  + LL LLQ Y                        G++ALFS+ PRR A L+R+
Sbjct: 1062 ILLGDFILVLLTLLQMYSLSLLSFFLVLFVLPLGVLFPFPSGISALFSQGPRRSAGLARL 1121

Query: 60   YALWSATSLSNIGVAFICCLVHYAVSHLHPDEASTRSVKREDDKCWLLPVILFLFKSVQV 119
            YALW+  SL N+ VAF C  +HY           + +   ++ + W+LP  L L K +Q 
Sbjct: 1122 YALWNLMSLVNVVVAFFCGFIHYTARSHKLSNFQSWNFSMDESEWWILPSGLALCKIIQA 1181

Query: 120  RLVNWHIANLEIQDFSLFCPDPDAFW 145
            RLV+ H+AN EIQD SL+  D + FW
Sbjct: 1182 RLVDCHVANQEIQDPSLYSSDTNVFW 1207


>Glyma05g36070.1 
          Length = 1437

 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 1    MLLADLSVTLLMLLQFYWXXXXXXXXXXXXXXXXXXXXXXXGLNALFSKEPRR-ASLSRV 59
            +LL D  + LL LLQ Y                        G++ALFS+ PRR A L+R+
Sbjct: 1290 ILLGDFILVLLTLLQMYSLSLLSFFLVLFVLPLGVLFPFPSGISALFSQGPRRSAGLARL 1349

Query: 60   YALWSATSLSNIGVAFICCLVHYAVSHLHPDEASTRSVKREDDKCWLLPVILFLFKSVQV 119
            YALW+  SL N+ VAF C  +HY           + +   ++ + W+LP  L L K +Q 
Sbjct: 1350 YALWNLMSLVNVVVAFFCGFIHYTARSHKLYNFQSWNFSMDESEWWILPSGLALCKIIQA 1409

Query: 120  RLVNWHIANLEIQDFSLFCPDPDAFW 145
            RLV+ H+AN EIQD SL+  D + FW
Sbjct: 1410 RLVDCHVANQEIQDPSLYSSDTNVFW 1435