Miyakogusa Predicted Gene

Lj2g3v1986450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1986450.1 tr|B6T5A5|B6T5A5_MAIZE Allyl alcohol
dehydrogenase-like protein OS=Zea mays PE=4 SV=1,48.51,6e-19,
,CUFF.38249.1
         (99 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g40940.1                                                       152   9e-38
Glyma01g35050.1                                                        77   3e-15

>Glyma01g40940.1 
          Length = 104

 Score =  152 bits (383), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 73/104 (70%), Positives = 85/104 (81%), Gaps = 5/104 (4%)

Query: 1   MGILWWRNGKKSQPE---EKSPVEKANGGAAAG--VQVPGMNGAMEVKRPPNTSVTVFEF 55
           MG+LWWR G K QP+   + S + K+NG  A     + PGMNGA+EV RPPNT+V++FEF
Sbjct: 1   MGLLWWRKGNKPQPQLQAKSSSIPKSNGTDATKPLTEAPGMNGAVEVPRPPNTTVSIFEF 60

Query: 56  GSVAASNDKVTLAGYCPVSEDLEPCRWEILPAIQSNAPQFRVVF 99
           GSV ASND+VTLAGYCPVSEDLEPCRWEILPA+QSNAPQFRVVF
Sbjct: 61  GSVTASNDQVTLAGYCPVSEDLEPCRWEILPAVQSNAPQFRVVF 104


>Glyma01g35050.1 
          Length = 55

 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 40/50 (80%)

Query: 32 QVPGMNGAMEVKRPPNTSVTVFEFGSVAASNDKVTLAGYCPVSEDLEPCR 81
          + PGMN  MEV RPPNT+V++FEF SV ASND+VTL GYC V +DL+PC 
Sbjct: 6  EAPGMNNTMEVPRPPNTTVSIFEFSSVVASNDQVTLTGYCLVFKDLKPCH 55