Miyakogusa Predicted Gene

Lj2g3v1984950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1984950.1 Non Chatacterized Hit- tr|I3SGA6|I3SGA6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,93.18,0,no
description,RNA polymerase Rpb7, N-terminal; no description,Nucleic
acid-binding, OB-fold; DNA-DI,CUFF.38217.1
         (176 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g09000.1                                                       345   1e-95
Glyma05g26040.7                                                       345   1e-95
Glyma05g26040.6                                                       345   1e-95
Glyma05g26040.5                                                       345   1e-95
Glyma05g26040.1                                                       313   7e-86
Glyma05g26040.4                                                       266   9e-72
Glyma14g01120.1                                                       252   2e-67
Glyma05g26040.3                                                       219   1e-57
Glyma05g26040.2                                                       184   3e-47
Glyma20g34690.1                                                        86   2e-17
Glyma20g34690.3                                                        86   2e-17
Glyma20g34690.2                                                        86   2e-17

>Glyma08g09000.1 
          Length = 176

 Score =  345 bits (885), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 167/176 (94%), Positives = 172/176 (97%)

Query: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLIL 60
           MFFHIVLERNMQLHPRYFGRNLRDNLV+KLMKDVEGTCSGRHGFVVAVTGIE+IGKGLI 
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 61  DGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
           DGTG VTFPVKY+CVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 121 SGDMPNYTTSDASVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVTI 176
           SGDMPNYTTSD SVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP T+
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATV 176


>Glyma05g26040.7 
          Length = 176

 Score =  345 bits (885), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 167/176 (94%), Positives = 172/176 (97%)

Query: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLIL 60
           MFFHIVLERNMQLHPRYFGRNLRDNLV+KLMKDVEGTCSGRHGFVVAVTGIE+IGKGLI 
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 61  DGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
           DGTG VTFPVKY+CVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 121 SGDMPNYTTSDASVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVTI 176
           SGDMPNYTTSD SVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP T+
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATV 176


>Glyma05g26040.6 
          Length = 176

 Score =  345 bits (885), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 167/176 (94%), Positives = 172/176 (97%)

Query: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLIL 60
           MFFHIVLERNMQLHPRYFGRNLRDNLV+KLMKDVEGTCSGRHGFVVAVTGIE+IGKGLI 
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 61  DGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
           DGTG VTFPVKY+CVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 121 SGDMPNYTTSDASVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVTI 176
           SGDMPNYTTSD SVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP T+
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATV 176


>Glyma05g26040.5 
          Length = 176

 Score =  345 bits (885), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 167/176 (94%), Positives = 172/176 (97%)

Query: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLIL 60
           MFFHIVLERNMQLHPRYFGRNLRDNLV+KLMKDVEGTCSGRHGFVVAVTGIE+IGKGLI 
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 61  DGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
           DGTG VTFPVKY+CVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 121 SGDMPNYTTSDASVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVTI 176
           SGDMPNYTTSD SVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP T+
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATV 176


>Glyma05g26040.1 
          Length = 217

 Score =  313 bits (801), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 150/159 (94%), Positives = 155/159 (97%)

Query: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLIL 60
           MFFHIVLERNMQLHPRYFGRNLRDNLV+KLMKDVEGTCSGRHGFVVAVTGIE+IGKGLI 
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 61  DGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
           DGTG VTFPVKY+CVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 121 SGDMPNYTTSDASVKIQKDSEVRLKIIGTRVDATEIFCI 159
           SGDMPNYTTSD SVKIQKDSEVRLKIIGTRVDATEI C+
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIVCL 159


>Glyma05g26040.4 
          Length = 140

 Score =  266 bits (680), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 128/136 (94%), Positives = 132/136 (97%)

Query: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLIL 60
           MFFHIVLERNMQLHPRYFGRNLRDNLV+KLMKDVEGTCSGRHGFVVAVTGIE+IGKGLI 
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 61  DGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
           DGTG VTFPVKY+CVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 121 SGDMPNYTTSDASVKI 136
           SGDMPNYTTSD SV I
Sbjct: 121 SGDMPNYTTSDGSVCI 136


>Glyma14g01120.1 
          Length = 171

 Score =  252 bits (643), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 129/176 (73%), Positives = 146/176 (82%), Gaps = 5/176 (2%)

Query: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLIL 60
           MFFHIVLER MQLHPRYFG N+RDNLV+KLMKDV+GTCSGRH FVVAVTGIE+IGKGLI 
Sbjct: 1   MFFHIVLERKMQLHPRYFGCNIRDNLVSKLMKDVKGTCSGRHKFVVAVTGIENIGKGLIH 60

Query: 61  DGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
           DGTG VTFPVKY+CVVFRPF G ++    +++ ++     +   +++    LIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFPG-LIRLYSSLLFRVIKLCNSNLWRLWFMT-LIPDDMEFQ 118

Query: 121 SGDMPNYTTSDASVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVTI 176
           SGD+PNYTTSD SVKIQKDSEVRLKIIGTRVD TEIFC   IKDDFLGVINDP TI
Sbjct: 119 SGDLPNYTTSDGSVKIQKDSEVRLKIIGTRVDPTEIFC---IKDDFLGVINDPATI 171


>Glyma05g26040.3 
          Length = 117

 Score =  219 bits (558), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 105/112 (93%), Positives = 110/112 (98%)

Query: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLIL 60
           MFFHIVLERNMQLHPRYFGRNLRDNLV+KLMKDVEGTCSGRHGFVVAVTGIE+IGKGLI 
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 61  DGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHL 112
           DGTG VTFPVKY+CVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNH+
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHV 112


>Glyma05g26040.2 
          Length = 105

 Score =  184 bits (468), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 88/95 (92%), Positives = 93/95 (97%)

Query: 1  MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLIL 60
          MFFHIVLERNMQLHPRYFGRNLRDNLV+KLMKDVEGTCSGRHGFVVAVTGIE+IGKGLI 
Sbjct: 1  MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 61 DGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKM 95
          DGTG VTFPVKY+CVVFRPFKGE+LEAVVTMVNK+
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKV 95


>Glyma20g34690.1 
          Length = 198

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 18/177 (10%)

Query: 5   IVLERNMQ-----LHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLI 59
           I+   N+Q     LH     R L D  V K  KD+        G+ +AVT +E IG+G +
Sbjct: 30  IIAAENLQPEGLMLHRAIIVRLLSDFAVKKATKDL--------GYFLAVTTLEKIGEGKV 81

Query: 60  LDGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDME 118
              TG V FPV +  + F+ FKGE+LE VV  V K G F   GP++ +++SN  +P D  
Sbjct: 82  RQHTGDVLFPVVFNVITFKFFKGEILEGVVHKVLKHGVFMRCGPIENVYLSNLKMP-DYR 140

Query: 119 FQSGDMPNYTTSDASVKIQKDSEVRLKIIGTR-VDATEIF-CIGTIKDDFLGVINDP 173
           +  G+   +  +D   KI KD  VR  +IGT+ ++A   F  + +++ D+LG I+ P
Sbjct: 141 YVPGENACF-MNDKMSKIGKDVTVRFSVIGTKWMEAEREFQALVSLEGDYLGPISTP 196


>Glyma20g34690.3 
          Length = 180

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 18/177 (10%)

Query: 5   IVLERNMQ-----LHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLI 59
           I+   N+Q     LH     R L D  V K  KD+        G+ +AVT +E IG+G +
Sbjct: 12  IIAAENLQPEGLMLHRAIIVRLLSDFAVKKATKDL--------GYFLAVTTLEKIGEGKV 63

Query: 60  LDGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDME 118
              TG V FPV +  + F+ FKGE+LE VV  V K G F   GP++ +++SN  +P D  
Sbjct: 64  RQHTGDVLFPVVFNVITFKFFKGEILEGVVHKVLKHGVFMRCGPIENVYLSNLKMP-DYR 122

Query: 119 FQSGDMPNYTTSDASVKIQKDSEVRLKIIGTR-VDATEIF-CIGTIKDDFLGVINDP 173
           +  G+   +  +D   KI KD  VR  +IGT+ ++A   F  + +++ D+LG I+ P
Sbjct: 123 YVPGENACF-MNDKMSKIGKDVTVRFSVIGTKWMEAEREFQALVSLEGDYLGPISTP 178


>Glyma20g34690.2 
          Length = 180

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 18/177 (10%)

Query: 5   IVLERNMQ-----LHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIEDIGKGLI 59
           I+   N+Q     LH     R L D  V K  KD+        G+ +AVT +E IG+G +
Sbjct: 12  IIAAENLQPEGLMLHRAIIVRLLSDFAVKKATKDL--------GYFLAVTTLEKIGEGKV 63

Query: 60  LDGTGSVTFPVKYRCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDME 118
              TG V FPV +  + F+ FKGE+LE VV  V K G F   GP++ +++SN  +P D  
Sbjct: 64  RQHTGDVLFPVVFNVITFKFFKGEILEGVVHKVLKHGVFMRCGPIENVYLSNLKMP-DYR 122

Query: 119 FQSGDMPNYTTSDASVKIQKDSEVRLKIIGTR-VDATEIF-CIGTIKDDFLGVINDP 173
           +  G+   +  +D   KI KD  VR  +IGT+ ++A   F  + +++ D+LG I+ P
Sbjct: 123 YVPGENACF-MNDKMSKIGKDVTVRFSVIGTKWMEAEREFQALVSLEGDYLGPISTP 178