Miyakogusa Predicted Gene

Lj2g3v1984730.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1984730.2 Non Chatacterized Hit- tr|I1G0U1|I1G0U1_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica PE,36.42,5e-17,no
description,NULL; coiled-coil,NULL; ACETYLORNITHINE DEACETYLASE,NULL;
PEPTIDASE M20 FAMILY MEMBER,CUFF.38215.2
         (289 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g04650.1                                                       551   e-157
Glyma01g40660.1                                                       166   2e-41
Glyma13g30790.1                                                        54   2e-07

>Glyma11g04650.1 
          Length = 438

 Score =  551 bits (1419), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 261/295 (88%), Positives = 279/295 (94%), Gaps = 6/295 (2%)

Query: 1   MRKLGETKPNLKSTVVAVFIANEENSAITGVGVDALVKDGLLNKLKNGPLFWIDTADKQP 60
           MRKLGETKPNLKS+VVAVFIANEENSAITGVGVDALVKDGLLNKLK+GPL+WIDTADKQP
Sbjct: 144 MRKLGETKPNLKSSVVAVFIANEENSAITGVGVDALVKDGLLNKLKDGPLYWIDTADKQP 203

Query: 61  CVGTGGMIPWKLHVTGKLFHSGLAHKAINPLELAMDAMKEIQLRFYRDFPPHPQEQVYGF 120
           CVGTGGMIPWKLHVTG+LFHSGLAHKAIN LELAMDA+KEIQLRFY DFPPHPQEQVYGF
Sbjct: 204 CVGTGGMIPWKLHVTGRLFHSGLAHKAINALELAMDALKEIQLRFYSDFPPHPQEQVYGF 263

Query: 121 ATPSTMKPTQWSYPGGGINQIPGECTISGDV------SVKDVMKKLQEYVGDINENISKL 174
           ATPST+KPTQWSYPGGGINQIPGECTISGDV      +VKDVMKKLQEYV DINE+  KL
Sbjct: 264 ATPSTLKPTQWSYPGGGINQIPGECTISGDVRLTPFYNVKDVMKKLQEYVDDINESAQKL 323

Query: 175 EARGPVSKYVLSDENLRGSLTITFDEAMSGVACDLNSRGFHVLCKATEEVVGHVKPYSMT 234
           E+RGPVSKYVL DEN+RG LT++FDEA+SGVACDLNSRGFHVLCKATEEVVG+VKPYS+T
Sbjct: 324 ESRGPVSKYVLPDENIRGRLTLSFDEALSGVACDLNSRGFHVLCKATEEVVGYVKPYSIT 383

Query: 235 GSLPLIRELQDEGFDVQTSGYGLMATYHAQNEYCLFNDMSQGYRVFTSVISQLED 289
           GSLPLIRELQ+EGFDVQTSGYGLMATYHAQNEYCLF DMSQGYRVF  +ISQLE+
Sbjct: 384 GSLPLIRELQEEGFDVQTSGYGLMATYHAQNEYCLFTDMSQGYRVFARIISQLEE 438


>Glyma01g40660.1 
          Length = 357

 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/86 (91%), Positives = 84/86 (97%)

Query: 1   MRKLGETKPNLKSTVVAVFIANEENSAITGVGVDALVKDGLLNKLKNGPLFWIDTADKQP 60
           +RKLGETK NLKST+VAVFIANEENSAITGVGVDALVKDGLLNKLK+GPL+WIDTADKQP
Sbjct: 138 VRKLGETKSNLKSTIVAVFIANEENSAITGVGVDALVKDGLLNKLKDGPLYWIDTADKQP 197

Query: 61  CVGTGGMIPWKLHVTGKLFHSGLAHK 86
            VGTGGMIPWKLHVTG+LFHSGLAHK
Sbjct: 198 GVGTGGMIPWKLHVTGRLFHSGLAHK 223


>Glyma13g30790.1 
          Length = 52

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/38 (78%), Positives = 31/38 (81%), Gaps = 4/38 (10%)

Query: 1  MRKLGETKPNLKSTVVAVFIA----NEENSAITGVGVD 34
          MRKLGE K NL+STVVAVFIA    NEENSAITGV VD
Sbjct: 1  MRKLGEIKSNLESTVVAVFIANETTNEENSAITGVVVD 38