Miyakogusa Predicted Gene

Lj2g3v1984720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1984720.1 Non Chatacterized Hit- tr|O49683|O49683_ARATH
Putative uncharacterized protein AT4g17840
OS=Arabidop,57.28,3e-18,seg,NULL; coiled-coil,NULL,CUFF.38235.1
         (104 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g04660.2                                                        79   8e-16
Glyma11g04660.1                                                        79   9e-16

>Glyma11g04660.2 
          Length = 402

 Score = 79.3 bits (194), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/103 (44%), Positives = 48/103 (46%), Gaps = 33/103 (32%)

Query: 1   MKKIYSPXXXXXXXXXXGFEWIQVILFNFTSFLNVVYLRLQMMKLISVLFGMLVWQTNNI 60
           MKKIYSP          G EWIQ                                 T+NI
Sbjct: 332 MKKIYSPLLEGLLALYLGCEWIQ---------------------------------TDNI 358

Query: 61  LAPIITHGIYSTVILGHGLWKINDHXXXXXXXXXXXKSEEQNS 103
           LAPIITHGIYSTVILGHGLWKINDH           KSEE+NS
Sbjct: 359 LAPIITHGIYSTVILGHGLWKINDHRRRLRQRIQQLKSEEKNS 401


>Glyma11g04660.1 
          Length = 404

 Score = 79.3 bits (194), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 46/103 (44%), Positives = 48/103 (46%), Gaps = 33/103 (32%)

Query: 1   MKKIYSPXXXXXXXXXXGFEWIQVILFNFTSFLNVVYLRLQMMKLISVLFGMLVWQTNNI 60
           MKKIYSP          G EWIQ                                 T+NI
Sbjct: 334 MKKIYSPLLEGLLALYLGCEWIQ---------------------------------TDNI 360

Query: 61  LAPIITHGIYSTVILGHGLWKINDHXXXXXXXXXXXKSEEQNS 103
           LAPIITHGIYSTVILGHGLWKINDH           KSEE+NS
Sbjct: 361 LAPIITHGIYSTVILGHGLWKINDHRRRLRQRIQQLKSEEKNS 403