Miyakogusa Predicted Gene

Lj2g3v1984100.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1984100.2 Non Chatacterized Hit- tr|A9NZ33|A9NZ33_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,52.08,2e-18,ESSS,NADH:ubiquinone oxidoreductase, ESSS subunit;
seg,NULL,CUFF.38189.2
         (127 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g29430.1                                                       138   1e-33
Glyma10g12260.1                                                       133   5e-32

>Glyma02g29430.1 
          Length = 128

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 63/77 (81%), Positives = 70/77 (90%)

Query: 36  GHEEHPKGYLFNRTPLAPWESRSWEDWELPCYITSFLTIVILGVGLNAKPDLTMETWAHE 95
           GHEE PKGYLFNRTP  P +SR WEDWELPCY+TSFLTIVILGVGLNAKPDLT+ETWAHE
Sbjct: 39  GHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHE 98

Query: 96  KALERLRMENNLTAGST 112
           KALERL++EN+L A +T
Sbjct: 99  KALERLKIENSLAAAAT 115


>Glyma10g12260.1 
          Length = 130

 Score =  133 bits (334), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 67/72 (93%)

Query: 36  GHEEHPKGYLFNRTPLAPWESRSWEDWELPCYITSFLTIVILGVGLNAKPDLTMETWAHE 95
           GHEE PKGYLFNRTP  P ++R WEDWELPCY+TSFLTIVILGVGLNAKPDLT+ETWAHE
Sbjct: 39  GHEERPKGYLFNRTPPPPGQARKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHE 98

Query: 96  KALERLRMENNL 107
           KALERL++EN+L
Sbjct: 99  KALERLKIENSL 110