Miyakogusa Predicted Gene

Lj2g3v1981870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1981870.1 tr|C6FDB1|C6FDB1_9CONI Phloem protein (Fragment)
OS=Pseudotsuga macrocarpa PE=4 SV=1,40.83,2e-18,seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.38155.1
         (423 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g40350.1                                                       393   e-109
Glyma11g04940.1                                                       382   e-106
Glyma06g05070.1                                                       362   e-100
Glyma04g05000.1                                                       350   2e-96

>Glyma01g40350.1 
          Length = 285

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/296 (69%), Positives = 228/296 (77%), Gaps = 15/296 (5%)

Query: 131 NRTGAEQTGAGSSVVDGVLDKLLTPEGSGFASVVLGSFARNLVLAFYCSDGVQSHDEFXX 190
           NRTG +QTG  S+VVD VLDK+LT  GSGFASVVLGSFARNLVLAFY      S  EF  
Sbjct: 2   NRTGGDQTG--STVVDRVLDKILTSAGSGFASVVLGSFARNLVLAFYSDQHNHSGREFNS 59

Query: 191 XXXXXXXXXXXXXXXXVPAWVDAVCDERCGELIGNCVQLFVSTAVAVFLDKTMHINTYDQ 250
                           V AWVD VC +RCGELIGNCVQLFVSTAVAV+LDKTMHINTYD 
Sbjct: 60  SNSNSET---------VLAWVDVVCGDRCGELIGNCVQLFVSTAVAVYLDKTMHINTYDD 110

Query: 251 FFAGLTNPKHEDSVRDMLMSVCNGAIESFVKTSHHVLTSAKPGDGSGSDSNLDIGETTPN 310
           FFAGLTNPKHE +VRDML+SVCNGA+E+ VKTSH V+TS+    GSGSDS L IGET  N
Sbjct: 111 FFAGLTNPKHETNVRDMLLSVCNGAVETLVKTSHQVITSSNADVGSGSDSYLSIGETVRN 170

Query: 311 R---VETSTMESKGGDVCVEENKSGWVSKVSSTLAIPSNRRLVLDVTGRVTFETVRSFME 367
               V  S++ESK  DVC +ENKSGW+SKVSSTLA+PSNR LVLDVTGRVTFETVRSFME
Sbjct: 171 EDLGVGMSSVESK-VDVCDDENKSGWLSKVSSTLAVPSNRSLVLDVTGRVTFETVRSFME 229

Query: 368 FVLKTLCASVRRCAHSVHDAVLEIMRYAAAKFSVIATICISLCLHVMDCPRALVPA 423
           FVL+  CASVRRCAH VH+AVLEI+RY AAK SVI TIC+SLCLH+M    ALV A
Sbjct: 230 FVLQIFCASVRRCAHIVHEAVLEIVRYVAAKSSVIVTICLSLCLHIMGGGWALVTA 285


>Glyma11g04940.1 
          Length = 267

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/293 (68%), Positives = 225/293 (76%), Gaps = 27/293 (9%)

Query: 131 NRTGAEQTGAGSSVVDGVLDKLLTPEGSGFASVVLGSFARNLVLAFYCSDGVQSHDEFXX 190
           NRTG +QTG  SSVVD VLDK+LTP GSGFASVVLGSFARNLVLAFY SD   +H     
Sbjct: 2   NRTGGDQTG--SSVVDRVLDKMLTPAGSGFASVVLGSFARNLVLAFY-SDQQHNHS---- 54

Query: 191 XXXXXXXXXXXXXXXXVPAWVDAVCDERCGELIGNCVQLFVSTAVAVFLDKTMHINTYDQ 250
                           V AWVD VC +RCGELIGNCVQLFVSTAVAV+LDKTMHINTYD 
Sbjct: 55  ---GGESNSINSNSETVLAWVDVVCGDRCGELIGNCVQLFVSTAVAVYLDKTMHINTYDD 111

Query: 251 FFAGLTNPKHEDSVRDMLMSVCNGAIESFVKTSHHVLTSAKPGDGSGSDSNLDIGETTPN 310
           FFAGLTNPKHE +VRDML+SVCNGA+E+ VKTSHHV+TS          SN D+G   P 
Sbjct: 112 FFAGLTNPKHETNVRDMLVSVCNGAVETLVKTSHHVITS----------SNADVGSGMP- 160

Query: 311 RVETSTMESKGGDVCVEENKSGWVSKVSSTLAIPSNRRLVLDVTGRVTFETVRSFMEFVL 370
                +++SK  DVC +ENKSGWVSKVSS+LA+PSNRRLVLDVTGRVTFETVRSFMEFVL
Sbjct: 161 -----SIQSKV-DVCDDENKSGWVSKVSSSLAVPSNRRLVLDVTGRVTFETVRSFMEFVL 214

Query: 371 KTLCASVRRCAHSVHDAVLEIMRYAAAKFSVIATICISLCLHVMDCPRALVPA 423
           +T CASVRRCAH VH+AVLEI+RY AAK SV+ TIC+SLCLH+M    ALVPA
Sbjct: 215 QTFCASVRRCAHIVHEAVLEIVRYVAAKSSVVVTICLSLCLHMMGGGWALVPA 267


>Glyma06g05070.1 
          Length = 410

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/428 (44%), Positives = 281/428 (65%), Gaps = 32/428 (7%)

Query: 9   ELQLVEKGFDYIRKRKKWIFISVAL----GFCAYSAYHAPSIARKRRKLSKLLGALFSVA 64
           +L L+ K   + R+ KK++ + +AL    G+ AY AY++P +A+KR +++KLL A  SVA
Sbjct: 2   DLPLLRKSLQFSRRNKKYLLL-IALFGASGYGAYRAYNSPYVAQKRCRIAKLLRAFVSVA 60

Query: 65  EAVAESADTIGVISRDMKEFLQSDSDQVPKSLNQISKVARSQHFSDSLTTVTHAVTVGVL 124
           E ++ SADT+ VIS D+  FL S+SD++P SL Q++K+A+S  FS SL  V+ AVT+G+L
Sbjct: 61  ELISNSADTVTVISNDLNRFLASESDEIPNSLKQLAKIAKSNEFSMSLARVSEAVTLGIL 120

Query: 125 RGNQSA---NRTGAEQTGAGSSVVDGVLDKLLTPEGSGFASVVLGSFARNLVLAFYCSDG 181
            G +S    ++   + T   S   D VL++  +  G+GF SVV+GSFARNLVL FY ++ 
Sbjct: 121 LGYKSQPGNDKKDTKITAEASGFSDRVLERFFSKAGTGFVSVVVGSFARNLVLGFYDAEP 180

Query: 182 VQSHDEFXXXXXXXXXXXXXXXXXXVPAWVDAVCDERCGELIGNCVQLFVSTAVAVFLDK 241
           V +  +                   VP WV+ +CDERCG+LIG+CVQ FVSTAVAVFLDK
Sbjct: 181 VGARFQ-----------------SDVPGWVNVICDERCGKLIGDCVQTFVSTAVAVFLDK 223

Query: 242 TMHINTYDQFFAGLTNPKHEDSVRDMLMSVCNGAIESFVKTSHHVLT--SAKPGDGSGSD 299
           TM +NTYD+ FAGL+NPKH+++V+ +L+S+CNGA+E+FV+TSH VLT  +A+P  G  S 
Sbjct: 224 TMDVNTYDEMFAGLSNPKHQENVKGILVSMCNGAMETFVRTSHQVLTNGTARPNTGL-SV 282

Query: 300 SNLDIGETTPNRVETSTMESKGGDVCVEENKSGWVSKVSSTLAIPSNRRLVLDVTGRVTF 359
           + + +  +    ++    + K G +       GW+ ++ S L++P+NRR VLDVTGRVTF
Sbjct: 283 APVVVPVSEDGCLKPEVFQLKIGSLINGVQDVGWLEQIKSVLSVPANRRFVLDVTGRVTF 342

Query: 360 ETVRSFMEFVLKTLCASVRRCAHSVHDAV----LEIMRYAAAKFSVIATICISLCLHVMD 415
           ETVRSF+ F++  +    +R    VH+ V    LE++RY  AK SVI T+C++L LH+M 
Sbjct: 343 ETVRSFVAFLVWRISDGFKRSVSKVHEEVMGKGLEVVRYVGAKSSVILTLCLALYLHIMG 402

Query: 416 CPRALVPA 423
             R L+PA
Sbjct: 403 GSRILLPA 410


>Glyma04g05000.1 
          Length = 415

 Score =  350 bits (898), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 184/431 (42%), Positives = 266/431 (61%), Gaps = 33/431 (7%)

Query: 9   ELQLVEKGFDYIRKRKKWIFISVALGFCAYSAYHAPSIARKRRKLSKLLGALFSVAEAVA 68
           +L L+ K   +  + K ++ +    G   Y+AY++P +A+KRR+++KLL A  S+AE ++
Sbjct: 2   DLPLLSKSLQFSLRNKNYLLLIALFGASGYAAYNSPYVAQKRRRIAKLLRAFVSLAELIS 61

Query: 69  ESADTIGVISRDMKEFLQSDSDQVPKSLNQISKVARSQHFSDSLTTVTHAVTVGVLRG-- 126
            SAD + VIS D+  FL S+SD++P SL Q++K+A+S  FS SL  ++ AVT+G+  G  
Sbjct: 62  NSADIVAVISNDLNRFLASESDEIPNSLKQLAKIAKSNDFSTSLARLSEAVTLGIFLGYK 121

Query: 127 -------NQSANRTGAEQTGAGSSVVDGVLDKLLTPEGSGFASVVLGSFARNLVLAFYCS 179
                  N + +   +E T   S   D VL++L +  G+GF SVV+GSFARNLVL FY +
Sbjct: 122 SHAGNDYNGNKDNIPSEITAEASRFSDRVLERLFSKAGTGFVSVVVGSFARNLVLGFYDA 181

Query: 180 DGVQSHDEFXXXXXXXXXXXXXXXXXXVPAWVDAVCDERCGELIGNCVQLFVSTAVAVFL 239
           + V +  +                   VP WV+ +CDERCG+LIG+CVQ FVSTAVAVFL
Sbjct: 182 ESVGTRSQ-----------------SDVPGWVNVICDERCGKLIGDCVQTFVSTAVAVFL 224

Query: 240 DKTMHINTYDQFFAGLTNPKHEDSVRDMLMSVCNGAIESFVKTSHHVLTSAKPGDGSG-- 297
           DKT  +NTYD+  AGL+NPKH+++V+ +L+S+CNGA+E+FV+TSH VLT+      SG  
Sbjct: 225 DKTKDVNTYDEMLAGLSNPKHQENVKGILVSMCNGAVETFVRTSHQVLTNRSVRSNSGLS 284

Query: 298 -SDSNLDIGETTPNRVETSTMESKGGDVCVEENKSGWVSKVSSTLAIPSNRRLVLDVTGR 356
            S   + + E    + E    + K G         GW+ ++ STL +P N+R VLDVTGR
Sbjct: 285 VSPVVVPVSEEGCLKQEALLQQLKIGSSVNGVQDVGWLEQIKSTLLVPVNQRFVLDVTGR 344

Query: 357 VTFETVRSFMEFVLKTLCASVRRCAHSVHDAV----LEIMRYAAAKFSVIATICISLCLH 412
           VT ETVRSF+ F+L  +    +     VH+ V    LE++RY  AK SVI T+C++L LH
Sbjct: 345 VTIETVRSFVAFLLWRISDGFKSSVSKVHEEVLGKGLEVVRYVGAKSSVILTLCLALYLH 404

Query: 413 VMDCPRALVPA 423
           +M   R L+PA
Sbjct: 405 IMGGSRILLPA 415