Miyakogusa Predicted Gene

Lj2g3v1980770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1980770.1 Non Chatacterized Hit- tr|I1J9G0|I1J9G0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13891
PE,52.21,0.00000000000005,seg,NULL,CUFF.38143.1
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g05000.1                                                       110   7e-25

>Glyma11g05000.1 
          Length = 159

 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 96/177 (54%), Gaps = 27/177 (15%)

Query: 1   MNRDDERKRRFNEGIVNLLYXXXXXXXXXXXXXXVEALN--LIEXXXXXXXXXXXXXXXY 58
           MN DD RKRRFNE IVN+LY              ++ +   LI+                
Sbjct: 1   MNPDD-RKRRFNEAIVNMLYPSPESPPLPQREQELKPVETALIDDGSRFDII-------- 51

Query: 59  IKSNAGSLYDNENASTSGDEE-EQHVDVNLTRSQXXXXXXXXXXEEAMRRGNLIGPLLPL 117
               +G+L D +NASTSG+EE +      LTR+Q          EEA+ RG LIGPLLPL
Sbjct: 52  ----SGNLDDYDNASTSGNEEHDSQTTEKLTRAQRKKIRKKKLKEEAIHRGKLIGPLLPL 107

Query: 118 SSSTATTQCADQVAVLEDAPSVRSNASEEGD-DEPACAKSKKLKHRRMAKGMAKDKR 173
           + +           V EDAP+VRSNA EEGD D  ACAKS K+KHRRMAK +AK+K+
Sbjct: 108 TPTQ----------VPEDAPTVRSNAPEEGDEDVGACAKSVKVKHRRMAKRLAKEKQ 154