Miyakogusa Predicted Gene

Lj2g3v1979690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1979690.1 tr|F2D2B0|F2D2B0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,28.99,0.0000000000001,DUF2215,Transmembrane protein 194;
seg,NULL; FAMILY NOT NAMED,NULL,CUFF.38136.1
         (490 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g05040.1                                                       666   0.0  
Glyma01g40240.1                                                       443   e-124
Glyma16g04100.1                                                       193   5e-49
Glyma19g29400.1                                                       189   8e-48

>Glyma11g05040.1 
          Length = 471

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/458 (71%), Positives = 372/458 (81%), Gaps = 5/458 (1%)

Query: 36  LDHNTTLLRLSNGLPVRNSPGTKIGSTVLVERVHIHGLPRFTNLGKFSHSVKVKVLP--A 93
           L  N TL +LS GLPV NSPG+K G+TV+VERVHIHGL RF NLGKF+HS+KVKVLP   
Sbjct: 16  LTQNATL-QLSRGLPVGNSPGSKPGATVIVERVHIHGLSRFRNLGKFAHSIKVKVLPLPT 74

Query: 94  SSDVRVPNIEVCFHRNASLAAGMCPQSQWEKVTKGYWARSMSPFDHKLLDIRTAGSTLEN 153
           +S+VR+PNIEVCFHRN SL AGMC   QWEKVTKG WARSMS FDHK+LD+RTAGSTLEN
Sbjct: 75  NSNVRLPNIEVCFHRNVSLVAGMCRHGQWEKVTKGSWARSMSLFDHKILDVRTAGSTLEN 134

Query: 154 FKVSTDEEFFAYRVVLLVLGIILMSTAAFVSKSLVFYYSSAMAXXXXXXXXXXXYQGMKL 213
           F+VS +EEFF YR+VLL LGIIL+S A+F+S+SL FYYSSAMA           YQGMKL
Sbjct: 135 FEVSVEEEFFVYRIVLLTLGIILLSLASFISQSLAFYYSSAMAIGIILVILIIIYQGMKL 194

Query: 214 LPTGRKSSLAIFLYSSAVGFGGFLLRYVPDLIRSVLTELGIDQDMYNPLAIFLLTFVAIA 273
           LPTGRKSSLAIFLYS+AVGFG FLLRY+P L+RS+LTELGID+DMYNPLAIFLLTFVAIA
Sbjct: 195 LPTGRKSSLAIFLYSTAVGFGTFLLRYIPGLVRSLLTELGIDEDMYNPLAIFLLTFVAIA 254

Query: 274 GAWMGFWVVHKLVLTEDGSVDISTAQFVAWAIRILAVIMILQSSMDPLLGTLAIFCGSFI 333
           GAW+GFWVVHKLVLTEDGSVDISTAQFVAWA+RILA +MILQSSMDPLLGTLA+ CGSF+
Sbjct: 255 GAWLGFWVVHKLVLTEDGSVDISTAQFVAWAVRILAAVMILQSSMDPLLGTLALLCGSFV 314

Query: 334 PXXXXXXXXXXXXXXXXXXXXSPKKN-RRSQVSDSPPFHNSHDEHEYKMQTKEDSLLLRP 392
                                SPKKN RRSQV DS PF +S DE  YKMQ+KEDS L RP
Sbjct: 315 SLLKKMHRLRFLRHLRRRLFKSPKKNRRRSQVPDSSPFDDSRDELMYKMQSKEDSPLFRP 374

Query: 393 KPKSFTFTSCKPSERGFSRTPPKMVTEELHPSIIHTTPERRKYSAAEWDAFTKKSTEKAL 452
           + +  T + CK    GF+RTPPK   E L+PSIIH TPER++YSAAEWDAFTKKSTE AL
Sbjct: 375 QLRGPTLSPCKSPVTGFTRTPPK-SQEALYPSIIHNTPERKRYSAAEWDAFTKKSTETAL 433

Query: 453 EELVASPDFGKWLSNNADRISVTPSTKTEQRRRWVLWS 490
           EELVASPDFGKWLS NADRISVTP+++T+Q+R W+LWS
Sbjct: 434 EELVASPDFGKWLSTNADRISVTPNSRTDQQRGWMLWS 471


>Glyma01g40240.1 
          Length = 419

 Score =  443 bits (1140), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/355 (65%), Positives = 258/355 (72%), Gaps = 53/355 (14%)

Query: 1   MAMARTHSSRSAWILRLFFLCASAILAFADERSLS-------------LDHN-------T 40
           MAMA TH+ +SAW LRL  L ASA+L FADERSL              LD N        
Sbjct: 1   MAMAGTHTRQSAWFLRLLCLWASAVLVFADERSLCMPSSPFSLISSFFLDSNIGFGLTQN 60

Query: 41  TLLRLSNGLPVRNSPGTKIGSTVLVERVHIHGLPRFTNLGKFSHSVKVKVLP--ASSDVR 98
           + L+LS GLPV NSP +K G+TV+VERVHIHGL RF NLGKF+HS KVKVLP   +S+VR
Sbjct: 61  STLQLSRGLPVGNSPASKPGATVVVERVHIHGLSRFRNLGKFAHSFKVKVLPLPTNSNVR 120

Query: 99  VPNIEVCFHRNASLAAGMCPQSQWEKVTKGYWARSMSPFDHKLLDIRTAGSTLENFKVST 158
           +PNIEVCFHRN SL AGMCP  QWEKVTKG WARSMSPFDHK+LDIRT GSTLENF+VS 
Sbjct: 121 LPNIEVCFHRNVSLVAGMCPHGQWEKVTKGSWARSMSPFDHKILDIRTTGSTLENFEVSV 180

Query: 159 DEEFFAYRVVLLVLGIILMSTAAFVSKSLVFYYSSAMAXXXXXXXXXXXYQGMKLLPTGR 218
           +EEFF YR+VLL LGIIL+S A+F+S+SL FYYSSAMA           YQGMKLLPTGR
Sbjct: 181 EEEFFVYRIVLLTLGIILLSLASFISQSLAFYYSSAMAIGIILVILIILYQGMKLLPTGR 240

Query: 219 KSSLAIFLYSSAVGFGGFLLRYVPDLIRSVLTELGIDQDMYNPLAIFLLTFVAIAGAWMG 278
           KSSLAIFLYS+A                               LAIFLLTFVAIAGAW+G
Sbjct: 241 KSSLAIFLYSTA-------------------------------LAIFLLTFVAIAGAWLG 269

Query: 279 FWVVHKLVLTEDGSVDISTAQFVAWAIRILAVIMILQSSMDPLLGTLAIFCGSFI 333
           FWVVHKLVLTEDGSVDISTAQFVAWAIRILA IMILQSSMDPLLGTLA+ CGS +
Sbjct: 270 FWVVHKLVLTEDGSVDISTAQFVAWAIRILAAIMILQSSMDPLLGTLALLCGSLV 324



 Score =  133 bits (335), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 62/79 (78%), Positives = 70/79 (88%), Gaps = 1/79 (1%)

Query: 412 TPPKMVTEELHPSIIHTTPERRKYSAAEWDAFTKKSTEKALEELVASPDFGKWLSNNADR 471
           TPPK   E L+PSIIH TPER+KYSAAEWDAFTKKSTEKALEELV SPDFGKWLS NADR
Sbjct: 342 TPPKS-QEALYPSIIHNTPERKKYSAAEWDAFTKKSTEKALEELVTSPDFGKWLSTNADR 400

Query: 472 ISVTPSTKTEQRRRWVLWS 490
           ISVTP+++T++R  W+LWS
Sbjct: 401 ISVTPNSRTDRRHGWMLWS 419


>Glyma16g04100.1 
          Length = 546

 Score =  193 bits (490), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 100/257 (38%), Positives = 156/257 (60%), Gaps = 10/257 (3%)

Query: 65  VERVHIHGLPRFTNLGKFSHSVKVKVLPASSDVRVPN-----IEVCFHRNASLAAGMCPQ 119
            ERV + G  R   LG +++S +V + P+   V +P      I+VCFHRN +L    C +
Sbjct: 61  CERVLVSGTSRL-KLGSYANSYRVTLAPS---VSIPEKLHSKIQVCFHRNDTLGWCQCEK 116

Query: 120 SQWEKVTKGYWARSMSPFDHKLLDIRTAGSTLENFKVSTDEEFFAYRVVLLVLGIILMST 179
            +W  V KG W   MSP++ + +D+R  G    +  V+ +E+F  +R+V L +G+IL+  
Sbjct: 117 DEWRGVQKGVWNAVMSPYETRYVDVRINGEISGSVIVAIEEDFQQWRLVCLAVGLILLLL 176

Query: 180 AAFVSKSLVFYYSSAMAXXXXXXXXXXXYQGMKLLPTGRKSSLAIFLYSSAVGFGGFLLR 239
           A  VS+ + FYYS++MA           +QGMKL+PTGRK+   + LY+S VG G FLL 
Sbjct: 177 APTVSRWVPFYYSTSMAIGIFLVIIILLFQGMKLMPTGRKNIFYLTLYTSVVGVGSFLLH 236

Query: 240 YVPDLIRSVLTELGIDQDMYNPLAIFLLTFVAIAGAWMGFWVVHKLVLT-EDGSVDISTA 298
               ++ S+   LG+ ++M+NP+A+F++  + +AGA +G+W+V + V++ EDG VD   A
Sbjct: 237 QFSLILNSIFQSLGMSEEMHNPVAVFVILGIILAGAALGYWIVRRFVISKEDGCVDAGVA 296

Query: 299 QFVAWAIRILAVIMILQ 315
           QFV WA+RI+    ILQ
Sbjct: 297 QFVKWAMRIIGTTFILQ 313



 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 40/59 (67%)

Query: 424 SIIHTTPERRKYSAAEWDAFTKKSTEKALEELVASPDFGKWLSNNADRISVTPSTKTEQ 482
           S  H T  R+K++  EWD FT++ST++AL E  ASP+F  W+  +ADRI V PS  +++
Sbjct: 465 STFHKTRNRKKFTKQEWDEFTRESTKQALAEWAASPEFTDWIVEHADRIQVLPSESSDE 523


>Glyma19g29400.1 
          Length = 321

 Score =  189 bits (479), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 99/256 (38%), Positives = 156/256 (60%), Gaps = 10/256 (3%)

Query: 66  ERVHIHGLPRFTNLGKFSHSVKVKVLPASSDVRVPN-----IEVCFHRNASLAAGMCPQS 120
           ERV + G+ R   LG +++S  V + P+   V +P      I+VCFHRN ++    C + 
Sbjct: 62  ERVRVSGISR-VKLGSYANSYHVTLAPS---VSIPEKLHSKIQVCFHRNETVGWCQCEKD 117

Query: 121 QWEKVTKGYWARSMSPFDHKLLDIRTAGSTLENFKVSTDEEFFAYRVVLLVLGIILMSTA 180
           +W  V KG W   MSP++ + +D+R  G  L +  V+ +E+F  +R+V L +G+IL+  A
Sbjct: 118 EWRGVQKGVWNAVMSPYETRYVDVRINGEILGSVTVAIEEDFQQWRLVCLAVGLILLLLA 177

Query: 181 AFVSKSLVFYYSSAMAXXXXXXXXXXXYQGMKLLPTGRKSSLAIFLYSSAVGFGGFLLRY 240
             VS+ + FYYS++MA           +QGMKL+PTGRK+   + +Y S VG G FLL  
Sbjct: 178 PTVSRWVPFYYSTSMAIGIFLVIIILLFQGMKLMPTGRKNIFYLTIYGSVVGAGSFLLHQ 237

Query: 241 VPDLIRSVLTELGIDQDMYNPLAIFLLTFVAIAGAWMGFWVVHKLVLT-EDGSVDISTAQ 299
              ++ S+   LG+ ++M+NP+A+F++  + +AGA +G+ +V + V++ EDGSVD   AQ
Sbjct: 238 FSLILNSIFQSLGMSEEMHNPVAVFVILGIILAGAALGYLIVRRFVISKEDGSVDAGVAQ 297

Query: 300 FVAWAIRILAVIMILQ 315
           FV WA+RI+    ILQ
Sbjct: 298 FVKWAMRIIGSTFILQ 313