Miyakogusa Predicted Gene

Lj2g3v1968210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1968210.1 tr|C1FEK9|C1FEK9_MICSR H+-or Na+-translocating
f-type, v-type and A-type ATPase superfamily
OS=Micro,42.99,1e-18,SUBFAMILY NOT NAMED,NULL; VACUOLAR ATP SYNTHASE
SUBUNIT AC39,ATPase, V0 complex, subunit D; vATP-syn,gene.g42467.t1.1
         (233 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g37520.1                                                       214   7e-56
Glyma18g49110.1                                                       214   9e-56
Glyma09g37520.2                                                        54   2e-07

>Glyma09g37520.1 
          Length = 351

 Score =  214 bits (545), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 100/112 (89%), Positives = 103/112 (91%)

Query: 122 FHPNFGLLYPYGHEELAVCEDVDQVYAVMEKYPPYQSIFAKLSYGESQMPDKAFYEEEAK 181
            + NFGLLYPYGHEELAVCED+DQV AVMEKYPPYQSIFAKLSYGESQM DKAFYEEE K
Sbjct: 240 LYSNFGLLYPYGHEELAVCEDIDQVRAVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVK 299

Query: 182 RLCLVFEQQFQYAVFFEYMRLGKQEIRNLMWISECVAQNQKSRVHDSVVFIF 233
           RLCL FEQQF YAVFF YMRL +QEIRNLMWISECVAQNQKSRVHDSVVFIF
Sbjct: 300 RLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351


>Glyma18g49110.1 
          Length = 368

 Score =  214 bits (544), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 100/112 (89%), Positives = 103/112 (91%)

Query: 122 FHPNFGLLYPYGHEELAVCEDVDQVYAVMEKYPPYQSIFAKLSYGESQMPDKAFYEEEAK 181
            + NFGLLYPYGHEELAVCED+DQV AVMEKYPPYQSIFAKLSYGESQM DKAFYEEE K
Sbjct: 257 LYSNFGLLYPYGHEELAVCEDIDQVRAVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVK 316

Query: 182 RLCLVFEQQFQYAVFFEYMRLGKQEIRNLMWISECVAQNQKSRVHDSVVFIF 233
           RLCL FEQQF YAVFF YMRL +QEIRNLMWISECVAQNQKSRVHDSVVFIF
Sbjct: 317 RLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 368


>Glyma09g37520.2 
          Length = 269

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/28 (78%), Positives = 24/28 (85%)

Query: 122 FHPNFGLLYPYGHEELAVCEDVDQVYAV 149
            + NFGLLYPYGHEELAVCED+DQV  V
Sbjct: 240 LYSNFGLLYPYGHEELAVCEDIDQVCMV 267