Miyakogusa Predicted Gene

Lj2g3v1904470.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1904470.2 Non Chatacterized Hit- tr|B8ACT4|B8ACT4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,85.71,0.078,Rer1,Retrieval of early ER protein Rer1; PROTEIN
RER1,Retrieval of early ER protein Rer1,CUFF.38046.2
         (191 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g39640.1                                                       332   2e-91
Glyma05g20940.1                                                       296   8e-81
Glyma17g18430.1                                                       293   6e-80
Glyma11g05620.1                                                       265   2e-71
Glyma06g01410.2                                                       248   2e-66
Glyma06g01410.1                                                       248   2e-66
Glyma06g01400.1                                                       248   3e-66
Glyma04g01370.2                                                       243   1e-64
Glyma04g01370.1                                                       243   1e-64
Glyma04g01360.1                                                       243   1e-64
Glyma17g18430.2                                                       162   2e-40

>Glyma01g39640.1 
          Length = 191

 Score =  332 bits (850), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 163/188 (86%), Positives = 171/188 (90%), Gaps = 2/188 (1%)

Query: 4   GGEVSPETAISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVS 63
           G + SPE  ISRWK  +SQQYQHMLDKTTPHVLRRW+GCLVVA++YVLRVYLV+GFYIVS
Sbjct: 6   GDDHSPEAVISRWKFAVSQQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQGFYIVS 65

Query: 64  YALGIYILNLLIGFLSPQVDPEVYDDGPTLPTSGSDEFRPFVRRIPEFKFWYSITKAFCI 123
           YALGIYILNLLIGFLSPQVDPE+  DGPTLPT GSDEFRPFVRR+PEFKFWYSITKAFCI
Sbjct: 66  YALGIYILNLLIGFLSPQVDPEI-SDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFCI 124

Query: 124 AFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYTGKRASA 183
           AFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGK RY GKRA A
Sbjct: 125 AFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKLRYDGKRA-A 183

Query: 184 ESKSLPED 191
           E  S   D
Sbjct: 184 EGTSPTMD 191


>Glyma05g20940.1 
          Length = 198

 Score =  296 bits (758), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 145/191 (75%), Positives = 159/191 (83%), Gaps = 3/191 (1%)

Query: 4   GGEVSPETAISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVS 63
           GG  SP   +SRWK    +Q+QH+LDK+TPHV RRW+G   VA +Y LRVYLV+GFY+VS
Sbjct: 8   GGASSPTATMSRWKFAAWRQFQHLLDKSTPHVGRRWLGFAAVALLYALRVYLVQGFYVVS 67

Query: 64  YALGIYILNLLIGFLSPQVDPEVY---DDGPTLPTSGSDEFRPFVRRIPEFKFWYSITKA 120
           Y LGIYILNLLIGFLSPQVDPE      D PTLP++ SDEFRPFVRR+PEFKFWYSITKA
Sbjct: 68  YGLGIYILNLLIGFLSPQVDPETVILDADVPTLPSTASDEFRPFVRRLPEFKFWYSITKA 127

Query: 121 FCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYTGKR 180
           FCIAFVMTFFSAFDVPVFWPILLFYWVVLF+LTMRRQISHMIKYKY+PFS GKQRY  KR
Sbjct: 128 FCIAFVMTFFSAFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYKYLPFSSGKQRYDVKR 187

Query: 181 ASAESKSLPED 191
           A  E  SL ED
Sbjct: 188 APPEITSLSED 198


>Glyma17g18430.1 
          Length = 197

 Score =  293 bits (751), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 143/188 (76%), Positives = 157/188 (83%), Gaps = 3/188 (1%)

Query: 4   GGEVSPETAISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVS 63
           GG  SP  A+SRWK    +QYQH+LDK+TPHV RRW+G   VA +Y+LRVY VEGFY+VS
Sbjct: 5   GGGASPTAAMSRWKFAAWRQYQHLLDKSTPHVGRRWLGFAAVALLYLLRVYFVEGFYVVS 64

Query: 64  YALGIYILNLLIGFLSPQVDPE---VYDDGPTLPTSGSDEFRPFVRRIPEFKFWYSITKA 120
           Y LGIYILNLLIGFLSPQVDPE   +  D P LP + SDEFRPFVRR+PEFKFWYSITKA
Sbjct: 65  YGLGIYILNLLIGFLSPQVDPETAILNADDPILPIAASDEFRPFVRRLPEFKFWYSITKA 124

Query: 121 FCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYTGKR 180
           FCIAFVMTFFS FDVPVFWPILLFYWVVLF+LTMRRQISHMIKYKY+PFS GKQRY  KR
Sbjct: 125 FCIAFVMTFFSVFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYKYLPFSSGKQRYDVKR 184

Query: 181 ASAESKSL 188
           A  E+ SL
Sbjct: 185 APPETTSL 192


>Glyma11g05620.1 
          Length = 191

 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 142/190 (74%), Positives = 152/190 (80%), Gaps = 6/190 (3%)

Query: 1   MEVG--GEVSPETAISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEG 58
           M+VG   + SPE AISRWK  +S+QYQHMLDKTTPHVLRRW+G   +   YVLRVYLV+G
Sbjct: 1   MDVGTADDHSPEAAISRWKFAVSRQYQHMLDKTTPHVLRRWIGAWWLPPCYVLRVYLVQG 60

Query: 59  FYIVSYALGIYILNLLIGFLSP-QVDPEVYDDGPTLPTSGSDEFRPFVRRIPEFKFWYSI 117
           FYIVSYAL    L L IG   P QVDPE+    P  P     +FRPFVRR+PEFKFWYSI
Sbjct: 61  FYIVSYALRHLHLTL-IGLPPPLQVDPEIIGR-PHPPHPRIRQFRPFVRRLPEFKFWYSI 118

Query: 118 TKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYT 177
           TKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRY 
Sbjct: 119 TKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYA 178

Query: 178 GKRASAESKS 187
           GKRA AE  S
Sbjct: 179 GKRA-AEGTS 187


>Glyma06g01410.2 
          Length = 198

 Score =  248 bits (634), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 116/169 (68%), Positives = 139/169 (82%), Gaps = 1/169 (0%)

Query: 9   PETAISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVSYALGI 68
           P   + ++    S+ +Q+ LDK+TPH L RW+G  V+ASIYVLRV  ++GFYIVSY LGI
Sbjct: 15  PSAPVKQYLQEFSKLFQYYLDKSTPHALYRWIGTFVIASIYVLRVVYLQGFYIVSYGLGI 74

Query: 69  YILNLLIGFLSPQVDPEVY-DDGPTLPTSGSDEFRPFVRRIPEFKFWYSITKAFCIAFVM 127
           Y+LNLLIGFLSP VDPE+   + P LPT GSDEF+PF+RR+PEFKFWYS TKA CIAFVM
Sbjct: 75  YLLNLLIGFLSPLVDPELDPSNAPMLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVM 134

Query: 128 TFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRY 176
           TFFS FDVPVFWPILL YWVVLF LTMRRQ++HM+KYKY+PF+ GKQ+Y
Sbjct: 135 TFFSMFDVPVFWPILLCYWVVLFVLTMRRQVAHMMKYKYIPFNLGKQKY 183


>Glyma06g01410.1 
          Length = 198

 Score =  248 bits (634), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 116/169 (68%), Positives = 139/169 (82%), Gaps = 1/169 (0%)

Query: 9   PETAISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVSYALGI 68
           P   + ++    S+ +Q+ LDK+TPH L RW+G  V+ASIYVLRV  ++GFYIVSY LGI
Sbjct: 15  PSAPVKQYLQEFSKLFQYYLDKSTPHALYRWIGTFVIASIYVLRVVYLQGFYIVSYGLGI 74

Query: 69  YILNLLIGFLSPQVDPEVY-DDGPTLPTSGSDEFRPFVRRIPEFKFWYSITKAFCIAFVM 127
           Y+LNLLIGFLSP VDPE+   + P LPT GSDEF+PF+RR+PEFKFWYS TKA CIAFVM
Sbjct: 75  YLLNLLIGFLSPLVDPELDPSNAPMLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVM 134

Query: 128 TFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRY 176
           TFFS FDVPVFWPILL YWVVLF LTMRRQ++HM+KYKY+PF+ GKQ+Y
Sbjct: 135 TFFSMFDVPVFWPILLCYWVVLFVLTMRRQVAHMMKYKYIPFNLGKQKY 183


>Glyma06g01400.1 
          Length = 194

 Score =  248 bits (633), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 117/169 (69%), Positives = 139/169 (82%), Gaps = 1/169 (0%)

Query: 13  ISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVSYALGIYILN 72
           + ++    S+ +Q+ LDK+TPH   RW+G  V+ASIYVLRV  V+GFYIVSY LGIY+LN
Sbjct: 15  VKQYLHDFSKLFQYYLDKSTPHSTYRWIGTFVIASIYVLRVVYVQGFYIVSYGLGIYLLN 74

Query: 73  LLIGFLSPQVDPEVY-DDGPTLPTSGSDEFRPFVRRIPEFKFWYSITKAFCIAFVMTFFS 131
           LLIGFLSP VDPE+   D P LPT GSDEF+PF+RR+PEFKFWYS TKA CIAFVMTFFS
Sbjct: 75  LLIGFLSPLVDPELDPSDSPLLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFS 134

Query: 132 AFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYTGKR 180
            FDVPVFWPILL YW VLF LTMRRQ++HMIKYKY+PF+ GKQ+Y+G +
Sbjct: 135 LFDVPVFWPILLCYWFVLFVLTMRRQVAHMIKYKYIPFNLGKQKYSGNK 183


>Glyma04g01370.2 
          Length = 194

 Score =  243 bits (619), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 115/157 (73%), Positives = 134/157 (85%), Gaps = 1/157 (0%)

Query: 21  SQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVSYALGIYILNLLIGFLSP 80
           S+ +Q+ LDK+TPH   RW+G  V+ASIYVLRV  V+GFYIVSY LGIY+LNLLIGFLSP
Sbjct: 23  SKLFQYYLDKSTPHPPYRWIGTFVIASIYVLRVVYVQGFYIVSYGLGIYLLNLLIGFLSP 82

Query: 81  QVDPEVY-DDGPTLPTSGSDEFRPFVRRIPEFKFWYSITKAFCIAFVMTFFSAFDVPVFW 139
            VDPE+   + P LPT GSDEF+PF+RR+PEFKFWYS TKA CIAFVMTFFS FDVPVFW
Sbjct: 83  LVDPELDPSNAPMLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSMFDVPVFW 142

Query: 140 PILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRY 176
           PILL YWVVLF LTMRRQ++HM+KYKY+PF+ GKQ+Y
Sbjct: 143 PILLCYWVVLFVLTMRRQVAHMMKYKYIPFNLGKQKY 179


>Glyma04g01370.1 
          Length = 194

 Score =  243 bits (619), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 115/157 (73%), Positives = 134/157 (85%), Gaps = 1/157 (0%)

Query: 21  SQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVSYALGIYILNLLIGFLSP 80
           S+ +Q+ LDK+TPH   RW+G  V+ASIYVLRV  V+GFYIVSY LGIY+LNLLIGFLSP
Sbjct: 23  SKLFQYYLDKSTPHPPYRWIGTFVIASIYVLRVVYVQGFYIVSYGLGIYLLNLLIGFLSP 82

Query: 81  QVDPEVY-DDGPTLPTSGSDEFRPFVRRIPEFKFWYSITKAFCIAFVMTFFSAFDVPVFW 139
            VDPE+   + P LPT GSDEF+PF+RR+PEFKFWYS TKA CIAFVMTFFS FDVPVFW
Sbjct: 83  LVDPELDPSNAPMLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSMFDVPVFW 142

Query: 140 PILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRY 176
           PILL YWVVLF LTMRRQ++HM+KYKY+PF+ GKQ+Y
Sbjct: 143 PILLCYWVVLFVLTMRRQVAHMMKYKYIPFNLGKQKY 179


>Glyma04g01360.1 
          Length = 196

 Score =  243 bits (619), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 115/165 (69%), Positives = 136/165 (82%), Gaps = 1/165 (0%)

Query: 13  ISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVSYALGIYILN 72
           + ++    S+ +Q+ LDK+TPH   RW+G  V+ASIYVLRV  V+GFYIVSY LGIY+LN
Sbjct: 17  VKQYLHDFSKLFQYYLDKSTPHSTYRWIGTFVIASIYVLRVVYVQGFYIVSYGLGIYLLN 76

Query: 73  LLIGFLSPQVDPEVY-DDGPTLPTSGSDEFRPFVRRIPEFKFWYSITKAFCIAFVMTFFS 131
           LLIGFLSP VDPE+   D P LPT GSDEF+PF+RR+PEFKFWYS TKA CIAFVMTFFS
Sbjct: 77  LLIGFLSPLVDPELDPSDSPLLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFS 136

Query: 132 AFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRY 176
            FDVPVFWPILL YW VLF LTMRRQ++HM+KYKY+PF+ GKQ+Y
Sbjct: 137 LFDVPVFWPILLCYWFVLFVLTMRRQVAHMMKYKYIPFNLGKQKY 181


>Glyma17g18430.2 
          Length = 139

 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/115 (67%), Positives = 90/115 (78%), Gaps = 3/115 (2%)

Query: 4   GGEVSPETAISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVS 63
           GG  SP  A+SRWK    +QYQH+LDK+TPHV RRW+G   VA +Y+LRVY VEGFY+VS
Sbjct: 5   GGGASPTAAMSRWKFAAWRQYQHLLDKSTPHVGRRWLGFAAVALLYLLRVYFVEGFYVVS 64

Query: 64  YALGIYILNLLIGFLSPQVDPE---VYDDGPTLPTSGSDEFRPFVRRIPEFKFWY 115
           Y LGIYILNLLIGFLSPQVDPE   +  D P LP + SDEFRPFVRR+PEFKF +
Sbjct: 65  YGLGIYILNLLIGFLSPQVDPETAILNADDPILPIAASDEFRPFVRRLPEFKFCF 119