Miyakogusa Predicted Gene

Lj2g3v1902120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1902120.1 tr|A9TF35|A9TF35_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_169716,79.37,5e-18,seg,NULL;
coiled-coil,NULL,CUFF.38125.1
         (190 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g30210.1                                                       258   2e-69
Glyma16g29840.2                                                       238   2e-63
Glyma16g29840.1                                                       238   2e-63
Glyma09g24610.1                                                       214   4e-56

>Glyma20g30210.1 
          Length = 188

 Score =  258 bits (660), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/190 (68%), Positives = 147/190 (77%), Gaps = 2/190 (1%)

Query: 1   MDSMACNXXXXXXXXXXXXXXDELDRLKQAEKKKRRLEKALSTSAAIISELGXXXXXXXX 60
           MD+MACN              D+LDRLKQAEKKKRRLEKAL+TSAAIISEL         
Sbjct: 1   MDNMACNKGQHVRKAKKKQVKDKLDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKE 60

Query: 61  XXXRLDEEGAAIAEAVALHVLLGEDSDESCNVVINEGGCNSWNYNHGLDFFMGGKRACFP 120
              RL+EEGAAIAEAVALHVLLGEDSD+SCNVV+N+ GC +WNYNH L  FMG + ACFP
Sbjct: 61  EQQRLNEEGAAIAEAVALHVLLGEDSDDSCNVVLNDSGCKTWNYNHKLGLFMGERTACFP 120

Query: 121 HLDGGTWSVTAENGNWSFSSGPFEFEKNVHEPLYEDAGWGCTGLSADLIAAQAARSLHIA 180
           HLDGGTWSV+AE+G WSF+SGP   EKNV+EPLYE+A WG TG S DLIAAQAARSLHIA
Sbjct: 121 HLDGGTWSVSAESGKWSFTSGP--LEKNVYEPLYEEARWGPTGFSVDLIAAQAARSLHIA 178

Query: 181 EDTDEDRILF 190
           +D DE RI+F
Sbjct: 179 KDADEARIIF 188


>Glyma16g29840.2 
          Length = 205

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 130/207 (62%), Positives = 138/207 (66%), Gaps = 19/207 (9%)

Query: 1   MDSMACNXXXXXXXXXXXXXXDELDRLKQAEKKKRRLEKALSTSAAIISELGXXXXXXXX 60
           MD+MACN              DELDRLKQAEKKKRRLEKAL+TSAAIISEL         
Sbjct: 1   MDTMACNKGQTVRKAKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKE 60

Query: 61  XXXRLDEEGAAIAEAVALHVLLGEDSDESCNVVINEGGCNSWNYNHGLDFFMGGKRACFP 120
              RLDEEGAAIAEAVALHVLLGEDSDESC VVI++GGC +WN N  L   +GG+ ACFP
Sbjct: 61  EQQRLDEEGAAIAEAVALHVLLGEDSDESCKVVIDDGGCKTWNCNRTLGISLGGESACFP 120

Query: 121 HLDGGTWSV-----------------TAENGNWSFSSGPFEFEKNVHEPLYEDAGWGCTG 163
           HLDGG WS                   AENG WSFSS P  FEKNVH PLYE AGWG   
Sbjct: 121 HLDGGRWSFERVGWVSDAYRYGCKWGAAENGEWSFSSEP--FEKNVHGPLYEGAGWGPAN 178

Query: 164 LSADLIAAQAARSLHIAEDTDEDRILF 190
            SADLIAAQA  SL IAE+ DEDRILF
Sbjct: 179 FSADLIAAQAVSSLQIAEEADEDRILF 205


>Glyma16g29840.1 
          Length = 205

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 130/207 (62%), Positives = 138/207 (66%), Gaps = 19/207 (9%)

Query: 1   MDSMACNXXXXXXXXXXXXXXDELDRLKQAEKKKRRLEKALSTSAAIISELGXXXXXXXX 60
           MD+MACN              DELDRLKQAEKKKRRLEKAL+TSAAIISEL         
Sbjct: 1   MDTMACNKGQTVRKAKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKE 60

Query: 61  XXXRLDEEGAAIAEAVALHVLLGEDSDESCNVVINEGGCNSWNYNHGLDFFMGGKRACFP 120
              RLDEEGAAIAEAVALHVLLGEDSDESC VVI++GGC +WN N  L   +GG+ ACFP
Sbjct: 61  EQQRLDEEGAAIAEAVALHVLLGEDSDESCKVVIDDGGCKTWNCNRTLGISLGGESACFP 120

Query: 121 HLDGGTWSV-----------------TAENGNWSFSSGPFEFEKNVHEPLYEDAGWGCTG 163
           HLDGG WS                   AENG WSFSS P  FEKNVH PLYE AGWG   
Sbjct: 121 HLDGGRWSFERVGWVSDAYRYGCKWGAAENGEWSFSSEP--FEKNVHGPLYEGAGWGPAN 178

Query: 164 LSADLIAAQAARSLHIAEDTDEDRILF 190
            SADLIAAQA  SL IAE+ DEDRILF
Sbjct: 179 FSADLIAAQAVSSLQIAEEADEDRILF 205


>Glyma09g24610.1 
          Length = 199

 Score =  214 bits (546), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/208 (59%), Positives = 133/208 (63%), Gaps = 27/208 (12%)

Query: 1   MDSMACNXXXXXXXXXXXXXXDELDRLKQAEKKKRRLEKALSTSAAIISELGXXXXXXXX 60
           MD+MACN              DELDRLKQAEKKKRRLEKAL+TSAAIISEL         
Sbjct: 1   MDTMACNKGQNVRKAKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQIKKE 60

Query: 61  XXXRLDEEGAAIAEAVALHVLLGEDSDESCNVVINEGGCNSWNYNHGLDFFMGGKRACFP 120
              RLDEEGAAIAEAVALHVLLGEDSDESC VVI+ G       N  +   + G+ ACFP
Sbjct: 61  EQQRLDEEGAAIAEAVALHVLLGEDSDESCKVVIDNG-------NQNIGISVSGESACFP 113

Query: 121 HLD-GGTWSV-----------------TAENGNWSFSSGPFEFEKNVHEPLYEDAGWGCT 162
           HL+ GG WS                   AENG WSFS+ P  FEKN+HEPLYE AGWG  
Sbjct: 114 HLEGGGGWSFERVGWVSDAYRYGCERGAAENGEWSFSTEP--FEKNMHEPLYEGAGWGPA 171

Query: 163 GLSADLIAAQAARSLHIAEDTDEDRILF 190
           G SADLIAAQA  SL IAE+ DEDRILF
Sbjct: 172 GFSADLIAAQAVSSLQIAEEADEDRILF 199