Miyakogusa Predicted Gene

Lj2g3v1877670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1877670.1 Non Chatacterized Hit- tr|C6TLU0|C6TLU0_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,65.67,0.000000000002,seg,NULL,
NODE_32179_length_580_cov_87.898277.path2.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g05260.1                                                        82   2e-16
Glyma17g34910.2                                                        75   2e-14
Glyma17g34910.1                                                        75   2e-14

>Glyma04g05260.1 
          Length = 280

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/131 (48%), Positives = 68/131 (51%), Gaps = 23/131 (17%)

Query: 6   SGVREKPAAGGDGGSLLLRASSDGMRQSGTTSDLVLQWGNRKRLRCMKVQVKDKDDSTGP 65
           S VREK   GGDG SLLLRASSD  RQ+ TTS+LVLQWGNRKRLRCMKVQV  KDDS+GP
Sbjct: 17  SSVREK--NGGDG-SLLLRASSDSARQA-TTSNLVLQWGNRKRLRCMKVQV--KDDSSGP 70

Query: 66  XXXXXXXXXXXXXXXXNNKEPLNKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNLR 125
                             K+ LNK                                PNLR
Sbjct: 71  VQRTTVRVDRRVVRTD--KDSLNK---------------ATFGVNYNNHHHQSNGYPNLR 113

Query: 126 QRPSSPPHRIL 136
           +RPSSP  RIL
Sbjct: 114 ERPSSPQPRIL 124


>Glyma17g34910.2 
          Length = 270

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 50/73 (68%), Gaps = 11/73 (15%)

Query: 1  MDKEA----SGVREKPAAGGDG------GSLLLRASSDGMRQSGTTSDLVLQWGNRKRLR 50
          MDKE+    + VRE+   GG G      GSLLLR  SDGMRQ+ TTSDL LQWGNRKRLR
Sbjct: 1  MDKESHNNGNSVRERDKVGGGGDNSSGAGSLLLRGGSDGMRQA-TTSDLGLQWGNRKRLR 59

Query: 51 CMKVQVKDKDDST 63
          CMKVQVK    S+
Sbjct: 60 CMKVQVKHDSSSS 72


>Glyma17g34910.1 
          Length = 313

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 50/73 (68%), Gaps = 11/73 (15%)

Query: 1  MDKEA----SGVREKPAAGGDG------GSLLLRASSDGMRQSGTTSDLVLQWGNRKRLR 50
          MDKE+    + VRE+   GG G      GSLLLR  SDGMRQ+ TTSDL LQWGNRKRLR
Sbjct: 1  MDKESHNNGNSVRERDKVGGGGDNSSGAGSLLLRGGSDGMRQA-TTSDLGLQWGNRKRLR 59

Query: 51 CMKVQVKDKDDST 63
          CMKVQVK    S+
Sbjct: 60 CMKVQVKHDSSSS 72