Miyakogusa Predicted Gene

Lj2g3v1873560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1873560.1 Non Chatacterized Hit- tr|D7L4E0|D7L4E0_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,43.23,4e-19,FAMILY NOT NAMED,NULL; DUF1685,Protein of unknown
function DUF1685; seg,NULL,CUFF.37985.1
         (177 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g39270.1                                                       224   4e-59
Glyma11g06000.1                                                       216   1e-56
Glyma20g01830.1                                                       119   1e-27
Glyma07g34280.1                                                       118   3e-27
Glyma10g30540.1                                                        88   5e-18
Glyma20g36860.1                                                        84   6e-17
Glyma03g40790.1                                                        77   1e-14
Glyma18g35980.2                                                        67   1e-11

>Glyma01g39270.1 
          Length = 172

 Score =  224 bits (570), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 117/160 (73%), Positives = 128/160 (80%), Gaps = 3/160 (1%)

Query: 17  FLLHRPPLMHPSSASPLLKQRSWSPDVCRNEAWLRRKGNWKNRRTKSVTDEDVDELKACI 76
           FLL RPPL+   SASPL KQRSWSPD  R+EAWLRRKGNWKNRR+KSVTDEDVDELKACI
Sbjct: 14  FLLQRPPLLQ--SASPLFKQRSWSPDAFRDEAWLRRKGNWKNRRSKSVTDEDVDELKACI 71

Query: 77  ELGFGFESSPEVELDRRLSDTLPALELYHAVNKSYSESRFHKXXXXXXXXXXXXXDREST 136
           ELGFGF+SSPEVELD+RLSDTLPAL LY+AVNK Y++S   K             D +ST
Sbjct: 72  ELGFGFDSSPEVELDQRLSDTLPALGLYYAVNKRYNDSLVTK-TTPSSSSSSAASDCDST 130

Query: 137 PSPISSPRTAIFGTDDDPQTVKTRLRQWAQVVACAVRQSS 176
           P P  SP +AIF T D+PQTVKTRLRQWAQVVACAVRQSS
Sbjct: 131 PCPHGSPHSAIFTTGDNPQTVKTRLRQWAQVVACAVRQSS 170


>Glyma11g06000.1 
          Length = 167

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/176 (67%), Positives = 131/176 (74%), Gaps = 11/176 (6%)

Query: 1   MSDSDFEDPPRDPPPAFLLHRPPLMHPSSASPLLKQRSWSPDVCRNEAWLRRKGNWKNRR 60
           MS+ D   PP      FLL RPPL+   SASPL KQRSWSPD  R+EAWLRRKGN KNRR
Sbjct: 1   MSEPDIHAPP------FLLQRPPLLQ--SASPLFKQRSWSPDAFRDEAWLRRKGNCKNRR 52

Query: 61  TKSVTDEDVDELKACIELGFGFESSPEVELDRRLSDTLPALELYHAVNKSYSESRFHKXX 120
           +KSVTDEDVDELKACIELGFGF+SSPE ELD+RLSDTLPAL LY+AVNK Y+ S   K  
Sbjct: 53  SKSVTDEDVDELKACIELGFGFDSSPENELDQRLSDTLPALGLYYAVNKRYNNSLVTKTT 112

Query: 121 XXXXXXXXXXXDRESTPSPISSPRTAIFGTDDDPQTVKTRLRQWAQVVACAVRQSS 176
                        +S+PSP  SP +AIF T D+PQTVKTRLRQWAQVVACAVRQSS
Sbjct: 113 PSSSSAASD---CDSSPSPHGSPHSAIFTTGDNPQTVKTRLRQWAQVVACAVRQSS 165


>Glyma20g01830.1 
          Length = 164

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/144 (47%), Positives = 89/144 (61%), Gaps = 19/144 (13%)

Query: 33  LLKQRSWSPDVCRNEAWLRRKGN------WKNRRTKSVTDEDVDELKACIELGFGFESSP 86
           L KQ+SWSPD+ R+EAW RRK N       ++R +KS++++D+DELKAC ELGFGF+S  
Sbjct: 16  LHKQQSWSPDMLRDEAWQRRKDNNHPVNRRQHRLSKSLSEDDLDELKACFELGFGFDSP- 74

Query: 87  EVELDRRLSDTLPALELYHAVNKSYSESRFHKXXXXXXXXXXXXXDRESTPSPISSPRTA 146
             E+D +LS+T+PALELYHAVNK Y+    H                 ++P       T 
Sbjct: 75  --EIDPKLSNTIPALELYHAVNKQYNH---HSLSRSSSSSSLVSDSDTTSP-------TT 122

Query: 147 IFGTDDDPQTVKTRLRQWAQVVAC 170
           IF   DD    KTRL+QWAQVVAC
Sbjct: 123 IFNPGDDLAAKKTRLKQWAQVVAC 146


>Glyma07g34280.1 
          Length = 170

 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 89/148 (60%), Gaps = 23/148 (15%)

Query: 33  LLKQRSWSPDVCRNEAWLRRKGN----------WKNRRTKSVTDEDVDELKACIELGFGF 82
           L KQ+SWSPD  R+EAW RRK N            +R +KS++++D+DELKAC ELGFGF
Sbjct: 17  LYKQQSWSPDTLRDEAWQRRKDNSHHISGDNHRCSHRLSKSLSEDDLDELKACFELGFGF 76

Query: 83  ESSPEVELDRRLSDTLPALELYHAVNKSYSESRFHKXXXXXXXXXXXXXDRESTPSPISS 142
           +S    E+D +LS+T+PALELYHAVNK Y+                       + S I+S
Sbjct: 77  DSP---EIDPKLSNTIPALELYHAVNKQYNHHS---------LSRSSSSSSLVSDSDIAS 124

Query: 143 PRTAIFGTDDDPQTVKTRLRQWAQVVAC 170
           P T IF   DD    KTRL+QWAQVVAC
Sbjct: 125 P-TTIFNPGDDLAAKKTRLKQWAQVVAC 151


>Glyma10g30540.1 
          Length = 195

 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 81/159 (50%), Gaps = 56/159 (35%)

Query: 45  RNEAWLRRKGNWKNRRTKSV-----TDEDVDELKACIELGFGFESSPEVELDRRLSDTLP 99
           R+ AW R++   + RR+ +V     TDED+ ELK CIELGFGF      E  +RL +TLP
Sbjct: 66  RDIAWERKRMQ-EQRRSSTVCDNDLTDEDLHELKGCIELGFGFNE----EDGQRLCNTLP 120

Query: 100 ALELYHAVNKSYSESRFHKXXXXXXXXXXXXXDRESTPSPISSP---------RTAIFGT 150
           AL+LY AVN+  S                        PSP+S+P         R++ FG+
Sbjct: 121 ALDLYFAVNRRLS------------------------PSPVSTPQSRASSLGCRSSSFGS 156

Query: 151 -------------DDDPQTVKTRLRQWAQVVACAVRQSS 176
                         DDP+ VKT+LR WAQ VAC+V QSS
Sbjct: 157 PRSDADSWKICSPGDDPEHVKTKLRHWAQAVACSVMQSS 195


>Glyma20g36860.1 
          Length = 195

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 69/135 (51%), Gaps = 50/135 (37%)

Query: 64  VTDEDVDELKACIELGFGFESSPEVELDRRLSDTLPALELYHAVNKSYSESRFHKXXXXX 123
           +TDED+ ELK CIELGFGF      E  +RL +TLPAL+LY AVN               
Sbjct: 89  LTDEDLHELKGCIELGFGFNE----EDGQRLCNTLPALDLYFAVN--------------- 129

Query: 124 XXXXXXXXDRESTPSPISSP---------RTAIFGT-------------DDDPQTVKTRL 161
                    R  +PSP+S+P         R++ FG+              DDP+ VKT+L
Sbjct: 130 ---------RRLSPSPVSTPQSRASSLGCRSSSFGSPRSDSDSWKICSPGDDPEHVKTKL 180

Query: 162 RQWAQVVACAVRQSS 176
           R WAQ VAC+V QSS
Sbjct: 181 RHWAQAVACSVMQSS 195


>Glyma03g40790.1 
          Length = 172

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 61/113 (53%), Gaps = 9/113 (7%)

Query: 63  SVTDEDVDELKACIELGFGFESSPEVELDRRLSDTLPALELYHAVNKSYSESRFHKXXXX 122
           +VTD+D+ ELK CIELGFGF      E  ++L +TLPAL+LY AVN+  S          
Sbjct: 68  NVTDDDLHELKGCIELGFGFNE----ENGQKLCNTLPALDLYFAVNRQLS-----SVSTP 118

Query: 123 XXXXXXXXXDRESTPSPISSPRTAIFGTDDDPQTVKTRLRQWAQVVACAVRQS 175
                       S+  P  S    I    DDP+ VKT+LR WAQ VAC++ QS
Sbjct: 119 HSRPSSSFGSPVSSAPPPDSDSWKICSPGDDPEHVKTKLRHWAQAVACSLMQS 171


>Glyma18g35980.2 
          Length = 98

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 36/44 (81%), Gaps = 1/44 (2%)

Query: 26 HPSSASPL-LKQRSWSPDVCRNEAWLRRKGNWKNRRTKSVTDED 68
          HP +A+ +   QRSWS D  RNEAWLRRKGNWKNRR+KSVTDED
Sbjct: 5  HPRAAASVPALQRSWSLDAFRNEAWLRRKGNWKNRRSKSVTDED 48