Miyakogusa Predicted Gene

Lj2g3v1838160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1838160.1 Non Chatacterized Hit- tr|G7ZY27|G7ZY27_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,48.94,0.0000000000005, ,CUFF.37950.1
         (99 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g16640.1                                                        88   3e-18
Glyma01g39160.1                                                        47   4e-06

>Glyma05g16640.1 
          Length = 86

 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 15/100 (15%)

Query: 1  MAKTNLKFVC-VVFLLLILHHQHVCVQGRHLRSCLCRGCPKTCVKIKSGVAHGVGDRGNR 59
          M  ++L+ +  V+FL LILHHQ + VQGR+L+  LC+ C K+              + N 
Sbjct: 1  MENSSLRNIAFVLFLFLILHHQVLFVQGRNLKCPLCKECSKS--------------QKNT 46

Query: 60 ATTHDYDTHQGRKRLVEYEVEAFRPTSPGHSPGVGHSINN 99
           +   Y+ HQ   R VEYEV+ FRPT+PGHSPGVGHSINN
Sbjct: 47 MSVASYEVHQEGLRRVEYEVDDFRPTTPGHSPGVGHSINN 86


>Glyma01g39160.1 
          Length = 87

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/21 (90%), Positives = 21/21 (100%)

Query: 79 VEAFRPTSPGHSPGVGHSINN 99
          VEAFRPT+PGHSPGVGHS+NN
Sbjct: 67 VEAFRPTTPGHSPGVGHSVNN 87