Miyakogusa Predicted Gene

Lj2g3v1828480.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1828480.2 Non Chatacterized Hit- tr|I3SG84|I3SG84_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.22,0,Ribosomal_S8e,Ribosomal protein S8e/ribosomal biogenesis
NSA2; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.37867.2
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g35500.1                                                       265   1e-71
Glyma10g10000.1                                                       264   2e-71
Glyma10g00490.1                                                       264   2e-71
Glyma02g35500.2                                                       221   1e-58

>Glyma02g35500.1 
          Length = 260

 Score =  265 bits (676), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 126/129 (97%), Positives = 128/129 (99%)

Query: 1   MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 60
           MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT
Sbjct: 132 MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 191

Query: 61  FNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNCSELGLVTPAGKVVWGKYAQVTNNPEND 120
           FNLE+IGVKKNPNGPMYTSLGV+TKGTIIEVN SELGLVTPAGKVVWGKYAQVTNNPEND
Sbjct: 192 FNLELIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPEND 251

Query: 121 GCINAVLLV 129
           GCINAVLLV
Sbjct: 252 GCINAVLLV 260


>Glyma10g10000.1 
          Length = 260

 Score =  264 bits (674), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 125/129 (96%), Positives = 128/129 (99%)

Query: 1   MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 60
           MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT
Sbjct: 132 MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 191

Query: 61  FNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNCSELGLVTPAGKVVWGKYAQVTNNPEND 120
           FNLE+IGVKKNPNGPMYTSLGV+T+GTIIEVN SELGLVTPAGKVVWGKYAQVTNNPEND
Sbjct: 192 FNLELIGVKKNPNGPMYTSLGVITRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPEND 251

Query: 121 GCINAVLLV 129
           GCINAVLLV
Sbjct: 252 GCINAVLLV 260


>Glyma10g00490.1 
          Length = 260

 Score =  264 bits (674), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 125/129 (96%), Positives = 128/129 (99%)

Query: 1   MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 60
           MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT
Sbjct: 132 MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 191

Query: 61  FNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNCSELGLVTPAGKVVWGKYAQVTNNPEND 120
           FNLE+IGVKKNPNGPMYTSLGV+T+GTIIEVN SELGLVTPAGKVVWGKYAQVTNNPEND
Sbjct: 192 FNLELIGVKKNPNGPMYTSLGVITRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPEND 251

Query: 121 GCINAVLLV 129
           GCINAVLLV
Sbjct: 252 GCINAVLLV 260


>Glyma02g35500.2 
          Length = 251

 Score =  221 bits (563), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 106/109 (97%), Positives = 108/109 (99%)

Query: 1   MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 60
           MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT
Sbjct: 132 MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 191

Query: 61  FNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNCSELGLVTPAGKVVWGK 109
           FNLE+IGVKKNPNGPMYTSLGV+TKGTIIEVN SELGLVTPAGKVVWGK
Sbjct: 192 FNLELIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGK 240