Miyakogusa Predicted Gene

Lj2g3v1828360.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1828360.2 Non Chatacterized Hit- tr|I3S5G9|I3S5G9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.68,0,ARM
repeat,Armadillo-type fold; V-TYPE PROTON ATPASE SUBUNIT H,NULL;
V-TYPE PROTON ATPASE SUBUNIT H,,CUFF.37870.2
         (349 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g06710.1                                                       615   e-176
Glyma16g25740.1                                                       469   e-132
Glyma04g33520.1                                                       145   7e-35
Glyma15g23890.1                                                        99   5e-21

>Glyma02g06710.1 
          Length = 622

 Score =  615 bits (1585), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 299/340 (87%), Positives = 317/340 (93%), Gaps = 2/340 (0%)

Query: 11  LLQKGNWFIQEKSCKILGLIASARPKNQNGIIANGEASKSKK--TTIDDVLIGLVKWLCE 68
           LL KGNWFIQEKSCKIL L+ S RPKNQNG+++NGEAS  KK  TTIDDVLIGLVKWLCE
Sbjct: 282 LLWKGNWFIQEKSCKILALVVSVRPKNQNGVVSNGEASNGKKPFTTIDDVLIGLVKWLCE 341

Query: 69  QLKKPSHPTRGVPTAINCLATLLKEPVVRSTFVQLDGIKLLVPLISPASTQQSIQLLYET 128
           QLKKPSHP RGVPTAINCLATLLKEPVVRS+FVQ DG+KLLVPLISPASTQQSIQLLYET
Sbjct: 342 QLKKPSHPIRGVPTAINCLATLLKEPVVRSSFVQADGVKLLVPLISPASTQQSIQLLYET 401

Query: 129 CLCIWLLSYYEPAIEYLATTRTLPRLIDVVKSSTKEKVVRVVVSTLKNLLPKGTFGAQMV 188
           CLCIWLLSYYEPAIEYLAT+RTLPRLIDVV+SSTKEKVVRVVV TLKNL+ KGT GAQMV
Sbjct: 402 CLCIWLLSYYEPAIEYLATSRTLPRLIDVVRSSTKEKVVRVVVLTLKNLMSKGTLGAQMV 461

Query: 189 ELQLPQVVQSLKAQAWSDEDLLEALNYLEDGLKDNIKKLSSYDKYKQGVLLGHLDWSPMH 248
           +LQL QVV SLKAQAWSDEDLLEALN LE+GLKDNIK+LSS+D YKQ VLLGHLDWSPMH
Sbjct: 462 DLQLAQVVLSLKAQAWSDEDLLEALNSLEEGLKDNIKRLSSFDMYKQEVLLGHLDWSPMH 521

Query: 249 KDSIFWRENITNFEENDFQILRVLITILDTSSDPRTLAVACFDLSQFVQHHPAGRFIVTD 308
           KD IFWRENI NFEENDFQILRVL+TILDTSSDPRTLAVAC+DLSQF+QHH AGR IV+D
Sbjct: 522 KDPIFWRENINNFEENDFQILRVLLTILDTSSDPRTLAVACYDLSQFIQHHSAGRIIVSD 581

Query: 309 LKAKERVMKLMNHENAEVTKNALLCIQRLFLGSKYASFLQ 348
           LKAKERVMKLMNHEN EVTKNALLCIQRLFLG+KYASFLQ
Sbjct: 582 LKAKERVMKLMNHENVEVTKNALLCIQRLFLGAKYASFLQ 621


>Glyma16g25740.1 
          Length = 416

 Score =  469 bits (1208), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 229/261 (87%), Positives = 241/261 (92%), Gaps = 2/261 (0%)

Query: 9   FRLLQKGNWFIQEKSCKILGLIASARPKNQNGIIANGEASKSKK--TTIDDVLIGLVKWL 66
           F LL KGNWFIQEKSCKIL LI S RPKNQNGI++NGEAS  KK  TTIDDVLIGLVKWL
Sbjct: 146 FVLLWKGNWFIQEKSCKILALIVSVRPKNQNGIVSNGEASNGKKPFTTIDDVLIGLVKWL 205

Query: 67  CEQLKKPSHPTRGVPTAINCLATLLKEPVVRSTFVQLDGIKLLVPLISPASTQQSIQLLY 126
           C+QLKKPSHP RGVPTAINCLATLLKEPVVRS+FV+ DG+KLLVPLISPASTQQSIQLLY
Sbjct: 206 CDQLKKPSHPIRGVPTAINCLATLLKEPVVRSSFVRADGVKLLVPLISPASTQQSIQLLY 265

Query: 127 ETCLCIWLLSYYEPAIEYLATTRTLPRLIDVVKSSTKEKVVRVVVSTLKNLLPKGTFGAQ 186
           ETCLCIWLLSYYEPAIEYLAT+RTLPRLIDVVKSSTKEKVVRVVV TLKNL+ KGT GAQ
Sbjct: 266 ETCLCIWLLSYYEPAIEYLATSRTLPRLIDVVKSSTKEKVVRVVVLTLKNLMSKGTLGAQ 325

Query: 187 MVELQLPQVVQSLKAQAWSDEDLLEALNYLEDGLKDNIKKLSSYDKYKQGVLLGHLDWSP 246
           MV+LQL QVVQSLKAQAWSDEDLLEALN LE+GLKDNIK+LSS+D YKQ VLLGHLDWSP
Sbjct: 326 MVDLQLAQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKRLSSFDMYKQEVLLGHLDWSP 385

Query: 247 MHKDSIFWRENITNFEENDFQ 267
           MHKD IFWRENI NFEENDFQ
Sbjct: 386 MHKDPIFWRENINNFEENDFQ 406


>Glyma04g33520.1 
          Length = 240

 Score =  145 bits (365), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/251 (41%), Positives = 128/251 (50%), Gaps = 66/251 (26%)

Query: 72  KPSHPTRGVPTAINCLATLLKEPVVR-----------------------STFVQLD---- 104
           KPSH  RGVPT INCLATLLKEPV                         + F  LD    
Sbjct: 1   KPSHLVRGVPTVINCLATLLKEPVCLLPIFSHTNLHNLKKLSYVLVQPLAQFSHLDIHDE 60

Query: 105 GIKLLVPLISPASTQQSI--QLLYETC-----------------LCIWLLSYYEPAIEYL 145
           G   ++PL   A+ +Q +  + L++                   L IWLL   EP  + L
Sbjct: 61  GHHAVLPL---ANLEQKLIDKFLFDNLFMKHVSAYGFYRIMSQQLNIWLLQ--EPFRDLL 115

Query: 146 ATTRTLPRLIDVVKSSTKEKVVRVVVS---------TLKNLLPKGTFGAQMVELQLPQVV 196
             +R L +   ++ +        + V          TLKNL+ KGT  +QMV+LQL  VV
Sbjct: 116 MLSRVLQKRSYLIFAEFVLTFYYIFVYVMVVRVVFLTLKNLMSKGTLVSQMVDLQLALVV 175

Query: 197 QSLKAQAWSDEDLLEALNYLEDGLKDNIKKLSSYDKYKQGVLLGHLDWSPMHKDSIFWRE 256
            SLK QAWSDEDLLEALN+       NIK+LSS+D YKQ +LL HLDWSPMHKDS+F  E
Sbjct: 176 LSLKDQAWSDEDLLEALNF------HNIKRLSSFDIYKQEILLDHLDWSPMHKDSVFIFE 229

Query: 257 NITNFEENDFQ 267
           NI NF  N  Q
Sbjct: 230 NINNFCSNYLQ 240


>Glyma15g23890.1 
          Length = 142

 Score = 99.4 bits (246), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 51/59 (86%), Gaps = 1/59 (1%)

Query: 66  LCEQL-KKPSHPTRGVPTAINCLATLLKEPVVRSTFVQLDGIKLLVPLISPASTQQSIQ 123
           LC  L  KPSHP RGVPTAINCLATLLKEPVVRS+FVQ DG+KLL+PLISPASTQ S Q
Sbjct: 59  LCSYLLSKPSHPVRGVPTAINCLATLLKEPVVRSSFVQADGVKLLMPLISPASTQHSFQ 117