Miyakogusa Predicted Gene

Lj2g3v1757330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1757330.1 tr|B9HEW6|B9HEW6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_764723 PE=4 SV=1,43.52,0.000001,
,CUFF.37801.1
         (110 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g38220.1                                                       116   6e-27

>Glyma01g38220.1 
          Length = 109

 Score =  116 bits (290), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/114 (63%), Positives = 88/114 (77%), Gaps = 9/114 (7%)

Query: 1   MECSRSSRLSRSQHILLLSESVSSDCTRMAGYERLSRSMSLDREYDFSDQDQHDKKQHKR 60
           ME SRS RLSRS HILL SESVSS+C ++AGYERLS+S+ L  EYDF D+    +K+HKR
Sbjct: 1   MEFSRSFRLSRSHHILLSSESVSSECAKIAGYERLSQSLRLSGEYDFIDK----QKKHKR 56

Query: 61  GLGILSKVILPFKKISNPPEESPP-KVAE---KKEKKRSSWLPDPDKRWPIQGW 110
           G+G+L KV   F+++S+P     P KVAE   KK+KKRSSWLPDPD+RWPIQGW
Sbjct: 57  GVGLLGKV-FSFRRVSSPHGVGEPNKVAETVVKKDKKRSSWLPDPDRRWPIQGW 109