Miyakogusa Predicted Gene

Lj2g3v1757320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1757320.1 Non Chatacterized Hit- tr|C6TMS6|C6TMS6_SOYBN
Putative uncharacterized protein (Fragment)
OS=Glycine,73.44,2e-19,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL,CUFF.37803.1
         (70 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g07290.1                                                       142   8e-35
Glyma01g38230.1                                                       141   1e-34
Glyma01g01590.1                                                       107   4e-24
Glyma04g14330.1                                                        51   3e-07

>Glyma11g07290.1 
          Length = 154

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 67/70 (95%), Positives = 69/70 (98%)

Query: 1   MATVIGLCLRVKLKHYFPPHYKVDIKVSPGSHADEESVNKQLNDKERIAAALENPNLRQL 60
           MATVIGLCLRVKLKHYFPPH+KVDIKVSPGSHADEESVNKQLNDKER+AAALENPNLRQL
Sbjct: 85  MATVIGLCLRVKLKHYFPPHFKVDIKVSPGSHADEESVNKQLNDKERVAAALENPNLRQL 144

Query: 61  VDECLSSNEL 70
           VDECL SNEL
Sbjct: 145 VDECLYSNEL 154


>Glyma01g38230.1 
          Length = 181

 Score =  141 bits (356), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 67/70 (95%), Positives = 69/70 (98%)

Query: 1   MATVIGLCLRVKLKHYFPPHYKVDIKVSPGSHADEESVNKQLNDKERIAAALENPNLRQL 60
           MATVIGLCLRVKLKHYFPPHYKVDIKVSPGSHA+EESVNKQLNDKER+AAALENPNLRQL
Sbjct: 112 MATVIGLCLRVKLKHYFPPHYKVDIKVSPGSHANEESVNKQLNDKERVAAALENPNLRQL 171

Query: 61  VDECLSSNEL 70
           VDECL SNEL
Sbjct: 172 VDECLYSNEL 181


>Glyma01g01590.1 
          Length = 150

 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 58/68 (85%)

Query: 1   MATVIGLCLRVKLKHYFPPHYKVDIKVSPGSHADEESVNKQLNDKERIAAALENPNLRQL 60
           MATVIGLCLRVKL    P  YKVDI+V+PGSHA E +VNKQLNDKER+AAALENPNL  +
Sbjct: 81  MATVIGLCLRVKLMRSLPSRYKVDIRVAPGSHATEAAVNKQLNDKERVAAALENPNLLNM 140

Query: 61  VDECLSSN 68
           VD+CL+S+
Sbjct: 141 VDDCLASS 148


>Glyma04g14330.1 
          Length = 147

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 7   LCLRVKLKHYFPPHYKVDIK-VSPGSHADEESVNKQLNDKERIAAALENPNLRQLVDECL 65
           L   ++ +H    H+ VDI+ + P        VNKQLNDKER+AAALEN NL  +VD+CL
Sbjct: 83  LAFMIQGEHTSSYHWLVDIRFLIPYFFLFLPMVNKQLNDKERVAAALENLNLLNMVDDCL 142

Query: 66  S 66
           +
Sbjct: 143 A 143