Miyakogusa Predicted Gene

Lj2g3v1757130.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1757130.2 tr|G7KDL7|G7KDL7_MEDTR DNA-3-methyladenine
glycosylase OS=Medicago truncatula GN=MTR_5g020300 PE=4
S,64.21,0,FAMILY NOT NAMED,NULL; HhH-GPD,HhH-GPD domain; no
description,DNA glycosylase; no description,Helix-,CUFF.37792.2
         (286 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g03390.1                                                       245   3e-65
Glyma06g03470.1                                                       244   5e-65
Glyma17g32370.1                                                        82   7e-16
Glyma08g16650.1                                                        59   4e-09
Glyma14g38470.1                                                        58   9e-09

>Glyma04g03390.1 
          Length = 374

 Score =  245 bits (626), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 117/204 (57%), Positives = 150/204 (73%), Gaps = 2/204 (0%)

Query: 64  GEIEAALNHLRAADPLLANCIDSLPPPHFSNDVVVTPFFSLTKSIISQQLSNKAASAIES 123
           GE+E AL +LR ADP+L+  ID   PP F N    TPF +LT+SI+ QQL+ KA ++I +
Sbjct: 108 GEVEIALRYLRNADPVLSPLIDIHQPPTFDN--FHTPFLALTRSILYQQLAYKAGTSIYT 165

Query: 124 RFVSLCGGRXXXXXXXXXXXXXXQLRQVGISGPKATYLHDLATKYIDGILSDSTILQMDD 183
           RF++LCGG               QLRQ+G+SG KA+YLHDLA KY +GILSDS I+ MDD
Sbjct: 166 RFIALCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 225

Query: 184 ETLHEKLTLVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVERLYGLKALPAPSLMER 243
           ++L   LT+V GIG WSVHMFMIF+LHRPDVLP+ DL VR+GV+ LY L+ LP PS M++
Sbjct: 226 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQ 285

Query: 244 LCQKWKPYSSVASCYMYKFMDAKG 267
           LC KW+PY SVAS YM++F++AKG
Sbjct: 286 LCDKWRPYRSVASWYMWRFVEAKG 309


>Glyma06g03470.1 
          Length = 351

 Score =  244 bits (624), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 119/214 (55%), Positives = 154/214 (71%), Gaps = 5/214 (2%)

Query: 64  GEIEAALNHLRAADPLLANCIDSLPPPHFSNDVVVTPFFSLTKSIISQQLSNKAASAIES 123
           GE+E +L +LR ADPLL+  ID   PP F N    TPF +LT+SI+ QQL+ KA ++I +
Sbjct: 94  GEVEISLRYLRNADPLLSPLIDIHQPPTFDN--FHTPFLALTRSILYQQLAFKAGTSIYT 151

Query: 124 RFVSLCGGRXXXXXXXXXXXXXXQLRQVGISGPKATYLHDLATKYIDGILSDSTILQMDD 183
           RF+ LCGG               QLRQ+G+SG KA+YLHDLA KY +GILSDS I+ MDD
Sbjct: 152 RFIGLCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 211

Query: 184 ETLHEKLTLVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVERLYGLKALPAPSLMER 243
           ++L   LT+V GIG WSVHMFMIF+LHRPDVLP+ DL VR+GV+ LY L+ LP PS M++
Sbjct: 212 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQ 271

Query: 244 LCQKWKPYSSVASCYMYKFMDAKGVLPLPATTIT 277
           LC KW+PY SVAS YM++F++AKG    P++ +T
Sbjct: 272 LCDKWRPYRSVASWYMWRFVEAKGT---PSSAVT 302


>Glyma17g32370.1 
          Length = 127

 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 16/113 (14%)

Query: 74  RAADPLLANCIDSLPPPHFSNDVVVTPFFSLTKSIISQQLSNKAASAIESRFVSLCGGRX 133
           R  DP+L+  I+   PP F N    TPF +LT++I+ QQL+ K  ++I   + S C    
Sbjct: 8   RNTDPVLSPLINVHQPPTFDN--FHTPFLALTRNILYQQLAYKVGTSI---YTSSCS--- 59

Query: 134 XXXXXXXXXXXXXQLRQVGISGPKATYLHDLATKYIDGILSDSTILQMDDETL 186
                        QLRQ+G+S  K +YLHDLA KY +GILSDS I+ MDD++L
Sbjct: 60  --------TGVKTQLRQIGVSRRKTSYLHDLARKYQNGILSDSAIVNMDDKSL 104


>Glyma08g16650.1 
          Length = 86

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 229 LYGLKALPAPSLMERLCQKWKPYSSVASCYMYKFMDAKGVLPLPATTITD 278
           LY L+ LP PS M++LC KW+PY SVAS YM++F++AKG         TD
Sbjct: 1   LYNLEDLPRPSQMDQLCDKWRPYRSVASWYMWRFVEAKGTPSSAVAVATD 50


>Glyma14g38470.1 
          Length = 70

 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 15/58 (25%)

Query: 203 MFMIFTLHRPDVLPVGDLVVRRGVERLYGLKALPAPSLMERLCQKWKPYSSVASCYMY 260
           MFMIF+LHRPDVL   DL               P PS M++LC KW+PY SVAS YM+
Sbjct: 1   MFMIFSLHRPDVLHKMDL---------------PRPSQMDQLCDKWRPYQSVASWYMW 43