Miyakogusa Predicted Gene

Lj2g3v1734700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1734700.1 Non Chatacterized Hit- tr|K3ZQ58|K3ZQ58_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si028738,33.1,1e-16,seg,NULL,CUFF.38675.1
         (1062 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g17320.1                                                        66   2e-10

>Glyma03g17320.1 
          Length = 232

 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 14/141 (9%)

Query: 914  RRTRGPTLCLNIHARNHNDRQEVVLDEYGEPIGPDGQTVSDLSHFLGTIARNANFCPLIY 973
            R  RGPTL  +I         +V  +   + IG +G+    L+ FLG IARN    PL  
Sbjct: 77   RNVRGPTLLRDIWTMPPGKTIDVQFNRRNQAIGKEGRK---LASFLGIIARNPELAPLNI 133

Query: 974  TNFKALVKDNEELIWGYVNDKFIIPDKGRKAVFSCINDAWRRHKCRIKRNYFLKYSSMKE 1033
             +++   K+ +  +   V  KF IP++G + V   +   W+ +KC ++  YF K      
Sbjct: 134  DDWRCFDKEEKNKLVDLVRKKFSIPERGVEFVKKSLGKKWKDYKCDLRSMYFTK------ 187

Query: 1034 RLKHCPTTIPKAHFKQLMTYW 1054
                 P  IP+  +  L++YW
Sbjct: 188  -----PNHIPRDQWIGLVSYW 203