Miyakogusa Predicted Gene

Lj2g3v1705490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1705490.1 Non Chatacterized Hit- tr|I1JG14|I1JG14_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5264
PE=,78.67,0,RRM_1,RNA recognition motif domain; coiled-coil,NULL;
seg,NULL; RNA-binding domain, RBD,NULL; RRM,RN,CUFF.37730.1
         (210 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g29190.2                                                       328   2e-90
Glyma02g29190.1                                                       328   2e-90
Glyma09g17080.2                                                       323   1e-88
Glyma09g17080.1                                                       323   1e-88
Glyma09g36730.1                                                        82   4e-16
Glyma10g06620.1                                                        50   2e-06
Glyma19g00530.1                                                        50   2e-06
Glyma11g10790.1                                                        49   3e-06
Glyma02g46650.1                                                        49   3e-06
Glyma17g35080.1                                                        48   6e-06
Glyma14g02020.2                                                        48   6e-06
Glyma14g02020.1                                                        48   6e-06
Glyma08g43740.1                                                        48   6e-06
Glyma18g09090.1                                                        48   7e-06

>Glyma02g29190.2 
          Length = 211

 Score =  328 bits (842), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 159/201 (79%), Positives = 179/201 (89%), Gaps = 3/201 (1%)

Query: 13  SLKRVT-AAKPSDGPDFLPLEGGPARKLPV--QTPLENKGTVLYVGRIPHGFYEKEIEGY 69
           +LKR +   KPS+G DFLPLEGGPARKL    Q P EN  TVLYVGRIPHGFYEKE+EGY
Sbjct: 11  NLKRASFNNKPSEGADFLPLEGGPARKLAASQQKPPENTATVLYVGRIPHGFYEKEMEGY 70

Query: 70  FGQFGTIKRLRIARNKKTGKSRHFGFIEFESAEVAKIVADTMHNYLLFAHLLQVHVMPPE 129
           FGQFGTIKRLRIARNKK+GKSRHFGFIEFES EVAKIVADTMHNYLLF HLLQV+V+PPE
Sbjct: 71  FGQFGTIKRLRIARNKKSGKSRHFGFIEFESPEVAKIVADTMHNYLLFEHLLQVYVIPPE 130

Query: 130 QVHPNLWRGFNYRSKPLDSVEIQREQHDKERTLEEHRKLVEKIVSRDKKRRKKIEEAGID 189
            VHP +WRGFNY  KPLDSV+I+R++HDKERTL+EH+KLV+K++  D+KRRK+IE AGID
Sbjct: 131 HVHPRIWRGFNYHYKPLDSVQIERKRHDKERTLKEHQKLVDKVLKHDQKRRKRIEAAGID 190

Query: 190 YECPEIVGNIQPAPKKLKFED 210
           YECPEIVGNIQPAPKK+KFED
Sbjct: 191 YECPEIVGNIQPAPKKIKFED 211


>Glyma02g29190.1 
          Length = 211

 Score =  328 bits (842), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 159/201 (79%), Positives = 179/201 (89%), Gaps = 3/201 (1%)

Query: 13  SLKRVT-AAKPSDGPDFLPLEGGPARKLPV--QTPLENKGTVLYVGRIPHGFYEKEIEGY 69
           +LKR +   KPS+G DFLPLEGGPARKL    Q P EN  TVLYVGRIPHGFYEKE+EGY
Sbjct: 11  NLKRASFNNKPSEGADFLPLEGGPARKLAASQQKPPENTATVLYVGRIPHGFYEKEMEGY 70

Query: 70  FGQFGTIKRLRIARNKKTGKSRHFGFIEFESAEVAKIVADTMHNYLLFAHLLQVHVMPPE 129
           FGQFGTIKRLRIARNKK+GKSRHFGFIEFES EVAKIVADTMHNYLLF HLLQV+V+PPE
Sbjct: 71  FGQFGTIKRLRIARNKKSGKSRHFGFIEFESPEVAKIVADTMHNYLLFEHLLQVYVIPPE 130

Query: 130 QVHPNLWRGFNYRSKPLDSVEIQREQHDKERTLEEHRKLVEKIVSRDKKRRKKIEEAGID 189
            VHP +WRGFNY  KPLDSV+I+R++HDKERTL+EH+KLV+K++  D+KRRK+IE AGID
Sbjct: 131 HVHPRIWRGFNYHYKPLDSVQIERKRHDKERTLKEHQKLVDKVLKHDQKRRKRIEAAGID 190

Query: 190 YECPEIVGNIQPAPKKLKFED 210
           YECPEIVGNIQPAPKK+KFED
Sbjct: 191 YECPEIVGNIQPAPKKIKFED 211


>Glyma09g17080.2 
          Length = 214

 Score =  323 bits (827), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 159/203 (78%), Positives = 178/203 (87%), Gaps = 5/203 (2%)

Query: 13  SLKRVTAAK-PSDGPDFLPLEGGPARKLPVQT----PLENKGTVLYVGRIPHGFYEKEIE 67
           +LKR +  K PS+  DFLPLEGGPARKL  Q     P EN  TVLYVGRIPHGFYEKE+E
Sbjct: 12  NLKRASFNKNPSEDADFLPLEGGPARKLAGQQKPPPPPENTATVLYVGRIPHGFYEKEME 71

Query: 68  GYFGQFGTIKRLRIARNKKTGKSRHFGFIEFESAEVAKIVADTMHNYLLFAHLLQVHVMP 127
           GYFGQFGTIKRLRIARNKK+GKSRHFGFIEFES EVAKIVADTMHNYLLF HLLQV+V+P
Sbjct: 72  GYFGQFGTIKRLRIARNKKSGKSRHFGFIEFESPEVAKIVADTMHNYLLFEHLLQVYVIP 131

Query: 128 PEQVHPNLWRGFNYRSKPLDSVEIQREQHDKERTLEEHRKLVEKIVSRDKKRRKKIEEAG 187
           PE VHP +WRGFNY  KPLDSV+I+R++HDK+RTLEEH+KLVEK++  D+KRRK+IE AG
Sbjct: 132 PEHVHPRIWRGFNYHYKPLDSVQIERKRHDKDRTLEEHKKLVEKVLKHDQKRRKRIEAAG 191

Query: 188 IDYECPEIVGNIQPAPKKLKFED 210
           IDYECPEIVGNIQPAPKK+KFED
Sbjct: 192 IDYECPEIVGNIQPAPKKIKFED 214


>Glyma09g17080.1 
          Length = 214

 Score =  323 bits (827), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 159/203 (78%), Positives = 178/203 (87%), Gaps = 5/203 (2%)

Query: 13  SLKRVTAAK-PSDGPDFLPLEGGPARKLPVQT----PLENKGTVLYVGRIPHGFYEKEIE 67
           +LKR +  K PS+  DFLPLEGGPARKL  Q     P EN  TVLYVGRIPHGFYEKE+E
Sbjct: 12  NLKRASFNKNPSEDADFLPLEGGPARKLAGQQKPPPPPENTATVLYVGRIPHGFYEKEME 71

Query: 68  GYFGQFGTIKRLRIARNKKTGKSRHFGFIEFESAEVAKIVADTMHNYLLFAHLLQVHVMP 127
           GYFGQFGTIKRLRIARNKK+GKSRHFGFIEFES EVAKIVADTMHNYLLF HLLQV+V+P
Sbjct: 72  GYFGQFGTIKRLRIARNKKSGKSRHFGFIEFESPEVAKIVADTMHNYLLFEHLLQVYVIP 131

Query: 128 PEQVHPNLWRGFNYRSKPLDSVEIQREQHDKERTLEEHRKLVEKIVSRDKKRRKKIEEAG 187
           PE VHP +WRGFNY  KPLDSV+I+R++HDK+RTLEEH+KLVEK++  D+KRRK+IE AG
Sbjct: 132 PEHVHPRIWRGFNYHYKPLDSVQIERKRHDKDRTLEEHKKLVEKVLKHDQKRRKRIEAAG 191

Query: 188 IDYECPEIVGNIQPAPKKLKFED 210
           IDYECPEIVGNIQPAPKK+KFED
Sbjct: 192 IDYECPEIVGNIQPAPKKIKFED 214


>Glyma09g36730.1 
          Length = 89

 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 48/72 (66%), Gaps = 5/72 (6%)

Query: 12 KSLKRVTAAKPSDGPDFLPLEGGPARKLPVQTPLENKGTVLYVGRIPHGFYEKEIEGYFG 71
          K+LKR T  KPS+  DFL LEGGP  K P Q  L+N  TVLYVGRIPHGFYEKE+EG   
Sbjct: 22 KNLKRATTNKPSEDADFLSLEGGPVCKQPEQKLLKNTATVLYVGRIPHGFYEKEMEG--- 78

Query: 72 QFGTIKRLRIAR 83
            G IK   + R
Sbjct: 79 --GKIKTFWVHR 88


>Glyma10g06620.1 
          Length = 275

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 39/77 (50%)

Query: 52  LYVGRIPHGFYEKEIEGYFGQFGTIKRLRIARNKKTGKSRHFGFIEFESAEVAKIVADTM 111
           L+VG +P      ++   F   G ++ + +  +K TG+SR FGF+   S E A+  A   
Sbjct: 88  LFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAQQF 147

Query: 112 HNYLLFAHLLQVHVMPP 128
           + Y L    L+V+  PP
Sbjct: 148 NGYELDGRALRVNSGPP 164


>Glyma19g00530.1 
          Length = 377

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 52  LYVGRIPHGFYEKEIEGYFGQFGTIKRLRIARNKKTGKSRHFGFIEFESAEVAKIVADTM 111
           ++VG IP    E E   +F ++G +K  +I R+  T +SR FGFI FES E    +  +M
Sbjct: 132 IFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLL-SM 190

Query: 112 HNYLLFAHLLQVHVMPPEQVHPN 134
            N + FA   QV +   E   PN
Sbjct: 191 GNKIDFAG-AQVEIKKAEPKKPN 212


>Glyma11g10790.1 
          Length = 748

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 5/93 (5%)

Query: 36  ARKLPVQTPLENKGT--VLYVGRIPHGFYEKEIEGYFGQFGTIKRLRIARNKKTGKSRHF 93
           A K PV TP E  GT   L+VG +P      ++EG+F   G +  +R A +  TGK + F
Sbjct: 464 APKTPV-TPREESGTSKTLFVGNLPFSVERADVEGFFKDAGEVVDVRFATD-DTGKFKGF 521

Query: 94  GFIEFESAEVAKIVADTMHNYLLFAHLLQVHVM 126
           G +EF +AE A+  A  ++   LF   L++ + 
Sbjct: 522 GHVEFATAEAAQN-ALGLNGQQLFNRELRLDLA 553


>Glyma02g46650.1 
          Length = 477

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 52  LYVGRIPHGFYEKEIEGYFGQFGTIKRLRIARNKKTGKSRHFGFIEFESAE-VAKIVADT 110
           ++VG +P    E + + YF QFGTI  + +  +  T + R FGFI ++S E V +++  T
Sbjct: 108 IFVGGLPSTITESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKT 167

Query: 111 MHNYLLFAHLLQVHVMPPEQVHPNLWR----GFNY 141
            H   L   +++V    P+++ P   R    G+NY
Sbjct: 168 FHE--LNGKMVEVKRAVPKELSPGPTRSPLIGYNY 200


>Glyma17g35080.1 
          Length = 180

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 52  LYVGRIPHGFYEKEIEGYFGQFGTIKRLRIARNKKTGKSRHFGFIEFESAE-VAKIVADT 110
           ++VG +P G  E+E + YF +FGTI  + + ++  T + R FGFI F+S + V  ++ ++
Sbjct: 13  IFVGGLPSGISEEEFKNYFERFGTITDVVVIQDSVTHRPRGFGFITFDSEKLVENVMLNS 72

Query: 111 MHN 113
            H+
Sbjct: 73  FHD 75


>Glyma14g02020.2 
          Length = 478

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 52  LYVGRIPHGFYEKEIEGYFGQFGTIKRLRIARNKKTGKSRHFGFIEFESAE-VAKIVADT 110
           ++VG +P    E + + YF QFGTI  + +  +  T + R FGFI ++S E V +++  T
Sbjct: 108 IFVGGLPSTITESDFKKYFDQFGTIADVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKT 167

Query: 111 MHNYLLFAHLLQVHVMPPEQVHPNLWR----GFNY 141
            H   L   +++V    P+++ P   R    G+NY
Sbjct: 168 FHE--LNGKMVEVKRAVPKELSPGPTRSPLIGYNY 200


>Glyma14g02020.1 
          Length = 478

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 52  LYVGRIPHGFYEKEIEGYFGQFGTIKRLRIARNKKTGKSRHFGFIEFESAE-VAKIVADT 110
           ++VG +P    E + + YF QFGTI  + +  +  T + R FGFI ++S E V +++  T
Sbjct: 108 IFVGGLPSTITESDFKKYFDQFGTIADVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKT 167

Query: 111 MHNYLLFAHLLQVHVMPPEQVHPNLWR----GFNY 141
            H   L   +++V    P+++ P   R    G+NY
Sbjct: 168 FHE--LNGKMVEVKRAVPKELSPGPTRSPLIGYNY 200


>Glyma08g43740.1 
          Length = 479

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 52  LYVGRIPHGFYEKEIEGYFGQFGTIKRLRIARNKKTGKSRHFGFIEFESAE-VAKIVADT 110
           ++VG +P    E + + YF QFGTI  + +  +  T + R FGFI ++S E V +++  T
Sbjct: 108 IFVGGLPSTITESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKT 167

Query: 111 MHNYLLFAHLLQVHVMPPEQVHPNLWR----GFNY 141
            H   L   +++V    P+++ P   R    G+NY
Sbjct: 168 FHE--LNGKMVEVKRAVPKELSPGPSRSPLIGYNY 200


>Glyma18g09090.1 
          Length = 476

 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 52  LYVGRIPHGFYEKEIEGYFGQFGTIKRLRIARNKKTGKSRHFGFIEFESAE-VAKIVADT 110
           ++VG +P    E + + YF QFGTI  + +  +  T + R FGFI ++S E V +++  T
Sbjct: 108 IFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKT 167

Query: 111 MHNYLLFAHLLQVHVMPPEQVHPNLWR----GFNY 141
            H   L   +++V    P+++ P   R    G+NY
Sbjct: 168 FHE--LNGKMVEVKRAVPKELSPGPSRSPLIGYNY 200