Miyakogusa Predicted Gene

Lj2g3v1705400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1705400.1 tr|G7KAA2|G7KAA2_MEDTR Hydrogen-transporting ATP
synthase rotational mechanism OS=Medicago
truncatul,78.57,6e-19,ATP-synt_G,ATPase, F0 complex, subunit G,
mitochondrial; OS01G0600000 PROTEIN (PUTATIVE
UNCHARACTERI,CUFF.37687.1
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03410.1                                                       206   6e-54
Glyma05g36240.1                                                       201   2e-52
Glyma13g42810.1                                                       174   2e-44
Glyma15g02630.1                                                        93   8e-20
Glyma03g07220.1                                                        86   1e-17

>Glyma08g03410.1 
          Length = 122

 Score =  206 bits (523), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 95/122 (77%), Positives = 111/122 (90%)

Query: 1   MASKLRQLQSKACQATQFVAKHGTAYHKQLLENNRQYIQEPATIEKCNELSKQLFYTRLA 60
           MASKL++LQS ACQA+QFV+  GT Y++QLLE N+Q+IQEP T+EKCN L+KQLFYTRLA
Sbjct: 1   MASKLQKLQSAACQASQFVSSRGTNYYRQLLEQNKQHIQEPPTVEKCNLLAKQLFYTRLA 60

Query: 61  SIPGRCEAFRKELDYTKNLWKNKQDLKVEDAGIAALFGLECFAWFCTGEIVGRGFTFTGY 120
           SIPGR E+F KELDY KNLWKN+++LKVEDAGIAALFGLECFAW+C GEIVGRGFTFTGY
Sbjct: 61  SIPGRNESFWKELDYVKNLWKNRKELKVEDAGIAALFGLECFAWYCGGEIVGRGFTFTGY 120

Query: 121 FV 122
           +V
Sbjct: 121 YV 122


>Glyma05g36240.1 
          Length = 122

 Score =  201 bits (510), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 94/122 (77%), Positives = 108/122 (88%)

Query: 1   MASKLRQLQSKACQATQFVAKHGTAYHKQLLENNRQYIQEPATIEKCNELSKQLFYTRLA 60
           MASKL++LQ+ A QA+QFV   GT Y+KQLLE N+Q+IQEP T+EKCN L+KQLFYTRLA
Sbjct: 1   MASKLQKLQATASQASQFVCSRGTNYYKQLLEQNKQHIQEPPTVEKCNLLAKQLFYTRLA 60

Query: 61  SIPGRCEAFRKELDYTKNLWKNKQDLKVEDAGIAALFGLECFAWFCTGEIVGRGFTFTGY 120
           SIP R E+F KELDY KNLWKN+++LKVEDAGIAALFGLECFAWFC GEIVGRGFTFTGY
Sbjct: 61  SIPSRNESFWKELDYAKNLWKNRKELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 FV 122
           +V
Sbjct: 121 YV 122


>Glyma13g42810.1 
          Length = 122

 Score =  174 bits (441), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 96/122 (78%)

Query: 1   MASKLRQLQSKACQATQFVAKHGTAYHKQLLENNRQYIQEPATIEKCNELSKQLFYTRLA 60
           MASK+ QLQSK  QA+Q    HG +Y++ LL+ N+ YIQ+P TIEKC  L+KQLFYTRLA
Sbjct: 1   MASKIPQLQSKVNQASQAAKNHGASYYRLLLDQNKHYIQDPPTIEKCQSLAKQLFYTRLA 60

Query: 61  SIPGRCEAFRKELDYTKNLWKNKQDLKVEDAGIAALFGLECFAWFCTGEIVGRGFTFTGY 120
           SIP R  +F KELD+ KNL KN+QDL +E  G AALFGLECFAWF  GEIVGRGFTFTGY
Sbjct: 61  SIPHRYNSFWKELDHAKNLVKNRQDLNMEKVGFAALFGLECFAWFWGGEIVGRGFTFTGY 120

Query: 121 FV 122
           +V
Sbjct: 121 YV 122


>Glyma15g02630.1 
          Length = 131

 Score = 92.8 bits (229), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 50/64 (78%)

Query: 59  LASIPGRCEAFRKELDYTKNLWKNKQDLKVEDAGIAALFGLECFAWFCTGEIVGRGFTFT 118
           L +IP R  +F KELD+ KNL KN+QDL +E  G AALFGLECFAWF  GEIVGRG TFT
Sbjct: 68  LYTIPHRYNSFWKELDHAKNLVKNRQDLNMEKVGFAALFGLECFAWFWGGEIVGRGCTFT 127

Query: 119 GYFV 122
           GY+V
Sbjct: 128 GYYV 131


>Glyma03g07220.1 
          Length = 79

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 46/62 (74%)

Query: 61  SIPGRCEAFRKELDYTKNLWKNKQDLKVEDAGIAALFGLECFAWFCTGEIVGRGFTFTGY 120
           SIP R  +  KELD+ KNL KN+QDL +E    AALFGLECFAWF  GEIVGRG TFT Y
Sbjct: 18  SIPHRYNSLWKELDHAKNLVKNRQDLNLEKVSFAALFGLECFAWFWGGEIVGRGCTFTSY 77

Query: 121 FV 122
           +V
Sbjct: 78  YV 79