Miyakogusa Predicted Gene

Lj2g3v1671000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1671000.1 tr|G7JXJ9|G7JXJ9_MEDTR 3-dehydroquinate synthase
OS=Medicago truncatula GN=MTR_5g022580 PE=3
SV=1,81.98,0,DHQ_synthase,NULL; DHQ_synthase,3-dehydroquinate synthase
AroB; aroB: 3-dehydroquinate synthase,3-de,CUFF.37668.1
         (455 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g08350.1                                                       708   0.0  
Glyma11g08350.2                                                       699   0.0  
Glyma01g36890.1                                                       699   0.0  

>Glyma11g08350.1 
          Length = 437

 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/419 (82%), Positives = 370/419 (88%), Gaps = 6/419 (1%)

Query: 39  PHALSSHPRTHFRLNPKWG--SVSTACPAVRRSMICASSSQVMDPSAPIIEPGVPAIVDV 96
           P   S++   HF  N  W   SVST+    R+S ICA+SSQVMDPSA   EP +P IV+V
Sbjct: 23  PSFFSNNNHLHFNSNNNWAWASVSTS----RKSRICATSSQVMDPSAAKSEPALPTIVEV 78

Query: 97  DLGNRSYPIYIGSGLLQKPELLQRHVHGKRVLVVTNETVAPLYLDKVIDALTKGNPNVSV 156
           DLG+RSYPIYIGSGLL +P+ LQRHVHGKRVLVVTNETVAPLYLDKV+DALT+GNPNVSV
Sbjct: 79  DLGSRSYPIYIGSGLLNQPDYLQRHVHGKRVLVVTNETVAPLYLDKVVDALTRGNPNVSV 138

Query: 157 ESVILPDGEQYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGVNF 216
           ESVILPDGEQYK+MDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAA+AFLRGVNF
Sbjct: 139 ESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAASAFLRGVNF 198

Query: 217 IQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLSTLPERELASGFGE 276
           IQIPTTVMAQVDSSVGGKTGINHRLGKN+IG FYQPQCVLIDTDTL+TLP+RELASG  E
Sbjct: 199 IQIPTTVMAQVDSSVGGKTGINHRLGKNMIGTFYQPQCVLIDTDTLNTLPDRELASGLAE 258

Query: 277 VIKYGLIRDAEFFEWQEKNMQALMARDPNALAYAIKRSCENKAEVVSLDEKESGLRATLN 336
           VIKYGLIRDAEFFEWQEKNM  L+ARDP+ +AYAIKRSCENKAEVVSLDEKESGLRATLN
Sbjct: 259 VIKYGLIRDAEFFEWQEKNMHLLLARDPSVMAYAIKRSCENKAEVVSLDEKESGLRATLN 318

Query: 337 LGHTFGHAIETGVGYGQWLHGEAVAAGTVMAADMSYRLGWIDDSIVRRVRDILIQAKLPI 396
           LGHTFGHAIETGVGYGQWLHGEAVAAGTVMA DMSYRLGWIDDS+V+RV DIL QAKLP 
Sbjct: 319 LGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSLVKRVGDILKQAKLPT 378

Query: 397 APPETMTVDIFKNVMAVDKKVADXXXXXXXXXXXXXNCVFTGDYDRKALDDTLNAFCKS 455
           APPET+TVD+FK+VMAVDKKVAD             NCVFTGDYDRKALD+TL AFCKS
Sbjct: 379 APPETVTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDNTLRAFCKS 437


>Glyma11g08350.2 
          Length = 436

 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/419 (81%), Positives = 369/419 (88%), Gaps = 7/419 (1%)

Query: 39  PHALSSHPRTHFRLNPKWG--SVSTACPAVRRSMICASSSQVMDPSAPIIEPGVPAIVDV 96
           P   S++   HF  N  W   SVST+    R+S ICA+SSQVMDPSA   EP +P IV+V
Sbjct: 23  PSFFSNNNHLHFNSNNNWAWASVSTS----RKSRICATSSQVMDPSAAKSEPALPTIVEV 78

Query: 97  DLGNRSYPIYIGSGLLQKPELLQRHVHGKRVLVVTNETVAPLYLDKVIDALTKGNPNVSV 156
           DLG+RSYPIYIGSGLL +P+ LQRHVHGKRVLVVTNETVAPLYLDKV+DALT+GNPNVSV
Sbjct: 79  DLGSRSYPIYIGSGLLNQPDYLQRHVHGKRVLVVTNETVAPLYLDKVVDALTRGNPNVSV 138

Query: 157 ESVILPDGEQYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGVNF 216
           ESVILPDGEQYK+MDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAA+AFLRGVNF
Sbjct: 139 ESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAASAFLRGVNF 198

Query: 217 IQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLSTLPERELASGFGE 276
           IQIPTTVMAQVDSSVGGKTGINHRLGKN+IG FYQPQCVLIDTDTL+TLP+RELASG  E
Sbjct: 199 IQIPTTVMAQVDSSVGGKTGINHRLGKNMIGTFYQPQCVLIDTDTLNTLPDRELASGLAE 258

Query: 277 VIKYGLIRDAEFFEWQEKNMQALMARDPNALAYAIKRSCENKAEVVSLDEKESGLRATLN 336
           VIKYGLIRDAEFFEWQEKNM  L+ARDP+ +AYAIKRSCENKAEVVSLDEKESGLRATLN
Sbjct: 259 VIKYGLIRDAEFFEWQEKNMHLLLARDPSVMAYAIKRSCENKAEVVSLDEKESGLRATLN 318

Query: 337 LGHTFGHAIETGVGYGQWLHGEAVAAGTVMAADMSYRLGWIDDSIVRRVRDILIQAKLPI 396
           LGHTFGH ++TGVGYGQWLHGEAVAAGTVMA DMSYRLGWIDDS+V+RV DIL QAKLP 
Sbjct: 319 LGHTFGH-VKTGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSLVKRVGDILKQAKLPT 377

Query: 397 APPETMTVDIFKNVMAVDKKVADXXXXXXXXXXXXXNCVFTGDYDRKALDDTLNAFCKS 455
           APPET+TVD+FK+VMAVDKKVAD             NCVFTGDYDRKALD+TL AFCKS
Sbjct: 378 APPETVTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDNTLRAFCKS 436


>Glyma01g36890.1 
          Length = 436

 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/421 (81%), Positives = 366/421 (86%), Gaps = 5/421 (1%)

Query: 36  FAPPHALSSHPRTHFRLNP-KWGSVSTACPAVRRSMICASSSQVMDPSAPIIEPGVPAIV 94
           F  P   S++   HF  N   W SVSTA    R+S IC +SSQV+D  A   EP +P  V
Sbjct: 20  FPKPSFFSNNNHLHFNSNNWAWTSVSTA----RKSRICVTSSQVLDSLAAKSEPALPTTV 75

Query: 95  DVDLGNRSYPIYIGSGLLQKPELLQRHVHGKRVLVVTNETVAPLYLDKVIDALTKGNPNV 154
           +VDLGNRSYPIYIGSGLL +P+ LQRHVHGKRVLVVTN+TVAPLYLDKV+DALT+GNPNV
Sbjct: 76  EVDLGNRSYPIYIGSGLLNQPDYLQRHVHGKRVLVVTNKTVAPLYLDKVVDALTRGNPNV 135

Query: 155 SVESVILPDGEQYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGV 214
           SVESVILPDGEQYK+MDTLMKVFDKAIE RLDRRCTFVALGGGVIGDMCG AAA FLRGV
Sbjct: 136 SVESVILPDGEQYKDMDTLMKVFDKAIELRLDRRCTFVALGGGVIGDMCGCAAALFLRGV 195

Query: 215 NFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLSTLPERELASGF 274
           NFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTL+TLP+RELASG 
Sbjct: 196 NFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGL 255

Query: 275 GEVIKYGLIRDAEFFEWQEKNMQALMARDPNALAYAIKRSCENKAEVVSLDEKESGLRAT 334
            EVIKYGLIRDAEFFEWQEKNM  L+ARDP+A+AYAIKRSCENKAEVVSLDEKESGLRAT
Sbjct: 256 AEVIKYGLIRDAEFFEWQEKNMHLLLARDPSAMAYAIKRSCENKAEVVSLDEKESGLRAT 315

Query: 335 LNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAADMSYRLGWIDDSIVRRVRDILIQAKL 394
           LNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMA DMSYRLGWIDDS+V+RV DIL QAKL
Sbjct: 316 LNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSLVKRVGDILKQAKL 375

Query: 395 PIAPPETMTVDIFKNVMAVDKKVADXXXXXXXXXXXXXNCVFTGDYDRKALDDTLNAFCK 454
           P APPET+TVD+FK+VMAVDKKVAD             NCVFTGDYDRKALDDTL AFCK
Sbjct: 376 PSAPPETVTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLRAFCK 435

Query: 455 S 455
           S
Sbjct: 436 S 436