Miyakogusa Predicted Gene

Lj2g3v1659640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1659640.1 Non Chatacterized Hit- tr|A3ADW0|A3ADW0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,64.52,1e-16,no
description,Peptide methionine sulphoxide reductase
MrsB,NODE_51673_length_735_cov_152.812241.path2.1
         (133 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g08590.1                                                       217   3e-57
Glyma09g21220.1                                                       101   2e-22
Glyma13g03370.1                                                        51   4e-07
Glyma14g23830.1                                                        48   4e-06
Glyma06g11880.1                                                        47   7e-06

>Glyma11g08590.1 
          Length = 143

 Score =  217 bits (552), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 100/123 (81%), Positives = 112/123 (91%)

Query: 5   SSIYCCTECGTDLNLNPAYAFPPDFYFEAGNKHSVSFSAVDSTKFTFEKEDKIRPFFETL 64
           +S+Y CTECG++LNLN A+A+PPDFYFEAGNK SVSFSAVD TKF FEKEDK+RPFFET+
Sbjct: 20  ASVYSCTECGSNLNLNSAHAYPPDFYFEAGNKGSVSFSAVDPTKFKFEKEDKLRPFFETV 79

Query: 65  NYWGIQRKRTKIKCCNCRRLVGHIYDDGPPLTDSPGQFHMGPSQVIPRNPRYRFKTKALR 124
           NYWGIQRKRTKIKC  C  L+G++YDDGPPLT+SPGQFHMGPSQVIPR PRYRFKTK LR
Sbjct: 80  NYWGIQRKRTKIKCNTCDCLLGYVYDDGPPLTNSPGQFHMGPSQVIPRAPRYRFKTKTLR 139

Query: 125 ITS 127
           ITS
Sbjct: 140 ITS 142


>Glyma09g21220.1 
          Length = 116

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/97 (52%), Positives = 62/97 (63%)

Query: 13  CGTDLNLNPAYAFPPDFYFEAGNKHSVSFSAVDSTKFTFEKEDKIRPFFETLNYWGIQRK 72
           CG++LNLN  Y +PPDFYFEA NK S+ FS VD+TKF F KEDKI  FFE +NY GIQRK
Sbjct: 1   CGSNLNLNSVYVYPPDFYFEADNKGSILFSIVDATKFKFVKEDKICTFFEIVNYRGIQRK 60

Query: 73  RTKIKCCNCRRLVGHIYDDGPPLTDSPGQFHMGPSQV 109
           RTKI C  C  ++         L   P  F   P+++
Sbjct: 61  RTKITCNTCACILATSRTMVHLLKIVPINFTWVPTKL 97


>Glyma13g03370.1 
          Length = 158

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 11/127 (8%)

Query: 8   YCCTECGTDLNL---NPAYAFPPDFYFEAGNKHSVSFSAVDSTKFTFEKEDKIRPFFETL 64
           Y C  CG +LNL   N   A     Y ++  +  +SF ++D ++FT   E +  P F+  
Sbjct: 26  YSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQCVPHFDK- 84

Query: 65  NYWGIQRKRTKIKCCNCRRLVGHIYD----DGPPLTDSPGQFHMGPSQVIPRNPRYRFKT 120
           + WG+ R+RTK+ C  C   +G+ Y+      P +TD        PS  +  + +Y  + 
Sbjct: 85  HSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVTDGA---ESSPSSKVVSHTKYDIRI 141

Query: 121 KALRITS 127
           +AL+ +S
Sbjct: 142 RALQPSS 148


>Glyma14g23830.1 
          Length = 178

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 9/126 (7%)

Query: 8   YCCTECGTDLNL---NPAYAFPPDFYFEAGNKHSVSFSAVDSTKFTFEKEDKIRPFFETL 64
           Y C  CG +LNL   N   A     Y ++  +  +SF ++D ++FT   E +  P F+  
Sbjct: 46  YSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQCVPHFDK- 104

Query: 65  NYWGIQRKRTKIKCCNCRRLVGHIYD---DGPPLTDSPGQFHMGPSQVIPRNPRYRFKTK 121
           + WG+ R+RTK+ C  C   +G+ Y+      PL     +    PS  +  + +Y  +  
Sbjct: 105 HSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVSDGAE--SSPSSKVVSHTKYDIRIC 162

Query: 122 ALRITS 127
           AL+ +S
Sbjct: 163 ALQPSS 168


>Glyma06g11880.1 
          Length = 168

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 8   YCCTECGTDLNLNPAYAFPPDF---YFEAGNKHSVSFSAVDSTKFTFEKEDKIRPFFETL 64
           Y C  CG +LNL+ +          Y ++  +  +SF  VD ++FT   E +  P+F + 
Sbjct: 33  YSCGTCGYELNLSSSNRNISSIGSKYGKSIKRGIISFLNVDDSRFTRADEIEFAPYF-SK 91

Query: 65  NYWGIQRKRTKIKCCNCRRLVGHIYDD 91
           + WG+ R++TK+ C  C   +G+ Y+D
Sbjct: 92  HKWGLFRRKTKLLCRKCCNHIGYAYND 118