Miyakogusa Predicted Gene

Lj2g3v1647850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1647850.1 tr|A9RQ75|A9RQ75_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_117579,31.68,1e-18,DNase-RNase,Bifunctional nuclease;
seg,NULL; Hypothetical protein TM0160,Bifunctional
nuclease,NODE_62094_length_1332_cov_62.785286.path1.1
         (323 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g08700.4                                                       442   e-124
Glyma11g08700.1                                                       442   e-124
Glyma01g36640.1                                                       406   e-113
Glyma11g08700.6                                                       371   e-103
Glyma11g08700.5                                                       371   e-103
Glyma11g08700.3                                                       359   2e-99
Glyma11g08700.2                                                       359   2e-99
Glyma14g07830.1                                                        82   7e-16
Glyma17g37160.1                                                        62   9e-10

>Glyma11g08700.4 
          Length = 324

 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/328 (69%), Positives = 264/328 (80%), Gaps = 13/328 (3%)

Query: 1   MLCSRSCIRTIA----VTADHTNAASTTRSFPHSLAVDFSS-HPFPLIRTRRFRCPKSIL 55
           ML SR C+RT++      ADHTN A+T RS P S+AVDFS  H  PL   RRFRC +SIL
Sbjct: 1   MLGSRFCVRTLSGVGSAAADHTNVATTARSVPCSVAVDFSPLHLSPLRSRRRFRCRRSIL 60

Query: 56  IXXXXXXXXXXXFPDHHNND--DFLEASLLLSETISHYHMWRQRFQPELQRKSRRPSIPL 113
           I              H NN+  D+LEASLLLSET SHYHMW+ RFQPE Q KS  PSIPL
Sbjct: 61  ISCNSSRRRSSSDNSHDNNNKNDYLEASLLLSETFSHYHMWKHRFQPEFQWKSSTPSIPL 120

Query: 114 SVQEKTSRSYNNLSRQGFLQRFQNPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQES 173
           S      R+ ++L R GFLQRF+NPTIFL++SCDGDYILPIV+G+IAIEKL+ AE EQES
Sbjct: 121 S------RTDSSLLRHGFLQRFKNPTIFLRISCDGDYILPIVVGQIAIEKLMDAESEQES 174

Query: 174 EDCPDQFQFVKDLVDRLDHEVIMVRITERVVSTYFAKLYISQPGESGIISLDARPSDAIN 233
            +CPDQ+QFV++LV RLDHEVIMVRITERVVSTYFA+LY+SQPG++ +IS+DARPSDAIN
Sbjct: 175 VECPDQYQFVENLVGRLDHEVIMVRITERVVSTYFARLYLSQPGKTDLISVDARPSDAIN 234

Query: 234 VANRCKAPIYVSKQIVFTDAIRLGYGMGGVLKKKATYDVLLDSPLDGPDVVAQELSMMRS 293
           VANRCKAPIYVSK+IVFTDAIR+GYGMGG   KKA YDVLLDS +DGPD+VAQELSMM +
Sbjct: 235 VANRCKAPIYVSKEIVFTDAIRIGYGMGGAHNKKAIYDVLLDSAIDGPDLVAQELSMMHN 294

Query: 294 MHTAIKMERFKDAAIWRDKLANLRKSSH 321
           MH+AIK ERFKDAAIWRDKLANLRKS+H
Sbjct: 295 MHSAIKQERFKDAAIWRDKLANLRKSTH 322


>Glyma11g08700.1 
          Length = 324

 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/328 (69%), Positives = 264/328 (80%), Gaps = 13/328 (3%)

Query: 1   MLCSRSCIRTIA----VTADHTNAASTTRSFPHSLAVDFSS-HPFPLIRTRRFRCPKSIL 55
           ML SR C+RT++      ADHTN A+T RS P S+AVDFS  H  PL   RRFRC +SIL
Sbjct: 1   MLGSRFCVRTLSGVGSAAADHTNVATTARSVPCSVAVDFSPLHLSPLRSRRRFRCRRSIL 60

Query: 56  IXXXXXXXXXXXFPDHHNND--DFLEASLLLSETISHYHMWRQRFQPELQRKSRRPSIPL 113
           I              H NN+  D+LEASLLLSET SHYHMW+ RFQPE Q KS  PSIPL
Sbjct: 61  ISCNSSRRRSSSDNSHDNNNKNDYLEASLLLSETFSHYHMWKHRFQPEFQWKSSTPSIPL 120

Query: 114 SVQEKTSRSYNNLSRQGFLQRFQNPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQES 173
           S      R+ ++L R GFLQRF+NPTIFL++SCDGDYILPIV+G+IAIEKL+ AE EQES
Sbjct: 121 S------RTDSSLLRHGFLQRFKNPTIFLRISCDGDYILPIVVGQIAIEKLMDAESEQES 174

Query: 174 EDCPDQFQFVKDLVDRLDHEVIMVRITERVVSTYFAKLYISQPGESGIISLDARPSDAIN 233
            +CPDQ+QFV++LV RLDHEVIMVRITERVVSTYFA+LY+SQPG++ +IS+DARPSDAIN
Sbjct: 175 VECPDQYQFVENLVGRLDHEVIMVRITERVVSTYFARLYLSQPGKTDLISVDARPSDAIN 234

Query: 234 VANRCKAPIYVSKQIVFTDAIRLGYGMGGVLKKKATYDVLLDSPLDGPDVVAQELSMMRS 293
           VANRCKAPIYVSK+IVFTDAIR+GYGMGG   KKA YDVLLDS +DGPD+VAQELSMM +
Sbjct: 235 VANRCKAPIYVSKEIVFTDAIRIGYGMGGAHNKKAIYDVLLDSAIDGPDLVAQELSMMHN 294

Query: 294 MHTAIKMERFKDAAIWRDKLANLRKSSH 321
           MH+AIK ERFKDAAIWRDKLANLRKS+H
Sbjct: 295 MHSAIKQERFKDAAIWRDKLANLRKSTH 322


>Glyma01g36640.1 
          Length = 305

 Score =  406 bits (1044), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/326 (66%), Positives = 248/326 (76%), Gaps = 28/326 (8%)

Query: 1   MLCSRSCIRTIA----VTADHTNAASTTRSFPHSLAVDFSSHPFPL-IRTRRFRCPKSIL 55
           ML SR C+RT++      ADHTNAAST RS P S+AVDFS    PL +   R R  +SIL
Sbjct: 1   MLGSRFCVRTVSGVGSAAADHTNAASTARSVPSSVAVDFS----PLHLSPLRSRRRRSIL 56

Query: 56  IXXXXXXXXXXXFPDHHNNDDFLEASLLLSETISHYHMWRQRFQPELQRKSRRPSIPLSV 115
           I              H NN+D+LEASLLLSET SHYHMW+ RFQPE Q KS  PSIPLS 
Sbjct: 57  ISCDSSRRRSSSGDSHDNNNDYLEASLLLSETFSHYHMWKHRFQPEFQWKSSTPSIPLS- 115

Query: 116 QEKTSRSYNNLSRQGFLQRFQNPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQESED 175
                R+ N L R GFLQRF+NPTIFL++SCDGDYILPIV+G+IAIEKL+ AE E ES +
Sbjct: 116 -----RTDNTLLRHGFLQRFKNPTIFLRISCDGDYILPIVVGQIAIEKLMDAESEHESVE 170

Query: 176 CPDQFQFVKDLVDRLDHEVIMVRITERVVSTYFAKLYISQPGESGIISLDARPSDAINVA 235
           CPDQ+QFV++LV RLDHEVIMVRITERVVSTYFA+LY+SQPG++ +IS+DARPSDAINVA
Sbjct: 171 CPDQYQFVENLVGRLDHEVIMVRITERVVSTYFARLYLSQPGKTDLISVDARPSDAINVA 230

Query: 236 NRCKAPIYVSKQIVFTDAIRLGYGMGGVLKKKATYDVLLDSPLDGPDVVAQELSMMRSMH 295
           NRCKA IYVSK+IVFTDAIR+GYGMGGV              +DGPD+VAQELSMM +M 
Sbjct: 231 NRCKAAIYVSKEIVFTDAIRIGYGMGGV-------------AVDGPDLVAQELSMMHNMR 277

Query: 296 TAIKMERFKDAAIWRDKLANLRKSSH 321
            AIK ERFKDAAIWRDKLANLRKS+H
Sbjct: 278 IAIKQERFKDAAIWRDKLANLRKSAH 303


>Glyma11g08700.6 
          Length = 225

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/229 (76%), Positives = 203/229 (88%), Gaps = 6/229 (2%)

Query: 93  MWRQRFQPELQRKSRRPSIPLSVQEKTSRSYNNLSRQGFLQRFQNPTIFLKVSCDGDYIL 152
           MW+ RFQPE Q KS  PSIPLS      R+ ++L R GFLQRF+NPTIFL++SCDGDYIL
Sbjct: 1   MWKHRFQPEFQWKSSTPSIPLS------RTDSSLLRHGFLQRFKNPTIFLRISCDGDYIL 54

Query: 153 PIVLGKIAIEKLIGAEVEQESEDCPDQFQFVKDLVDRLDHEVIMVRITERVVSTYFAKLY 212
           PIV+G+IAIEKL+ AE EQES +CPDQ+QFV++LV RLDHEVIMVRITERVVSTYFA+LY
Sbjct: 55  PIVVGQIAIEKLMDAESEQESVECPDQYQFVENLVGRLDHEVIMVRITERVVSTYFARLY 114

Query: 213 ISQPGESGIISLDARPSDAINVANRCKAPIYVSKQIVFTDAIRLGYGMGGVLKKKATYDV 272
           +SQPG++ +IS+DARPSDAINVANRCKAPIYVSK+IVFTDAIR+GYGMGG   KKA YDV
Sbjct: 115 LSQPGKTDLISVDARPSDAINVANRCKAPIYVSKEIVFTDAIRIGYGMGGAHNKKAIYDV 174

Query: 273 LLDSPLDGPDVVAQELSMMRSMHTAIKMERFKDAAIWRDKLANLRKSSH 321
           LLDS +DGPD+VAQELSMM +MH+AIK ERFKDAAIWRDKLANLRKS+H
Sbjct: 175 LLDSAIDGPDLVAQELSMMHNMHSAIKQERFKDAAIWRDKLANLRKSTH 223


>Glyma11g08700.5 
          Length = 225

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/229 (76%), Positives = 203/229 (88%), Gaps = 6/229 (2%)

Query: 93  MWRQRFQPELQRKSRRPSIPLSVQEKTSRSYNNLSRQGFLQRFQNPTIFLKVSCDGDYIL 152
           MW+ RFQPE Q KS  PSIPLS      R+ ++L R GFLQRF+NPTIFL++SCDGDYIL
Sbjct: 1   MWKHRFQPEFQWKSSTPSIPLS------RTDSSLLRHGFLQRFKNPTIFLRISCDGDYIL 54

Query: 153 PIVLGKIAIEKLIGAEVEQESEDCPDQFQFVKDLVDRLDHEVIMVRITERVVSTYFAKLY 212
           PIV+G+IAIEKL+ AE EQES +CPDQ+QFV++LV RLDHEVIMVRITERVVSTYFA+LY
Sbjct: 55  PIVVGQIAIEKLMDAESEQESVECPDQYQFVENLVGRLDHEVIMVRITERVVSTYFARLY 114

Query: 213 ISQPGESGIISLDARPSDAINVANRCKAPIYVSKQIVFTDAIRLGYGMGGVLKKKATYDV 272
           +SQPG++ +IS+DARPSDAINVANRCKAPIYVSK+IVFTDAIR+GYGMGG   KKA YDV
Sbjct: 115 LSQPGKTDLISVDARPSDAINVANRCKAPIYVSKEIVFTDAIRIGYGMGGAHNKKAIYDV 174

Query: 273 LLDSPLDGPDVVAQELSMMRSMHTAIKMERFKDAAIWRDKLANLRKSSH 321
           LLDS +DGPD+VAQELSMM +MH+AIK ERFKDAAIWRDKLANLRKS+H
Sbjct: 175 LLDSAIDGPDLVAQELSMMHNMHSAIKQERFKDAAIWRDKLANLRKSTH 223


>Glyma11g08700.3 
          Length = 281

 Score =  359 bits (922), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 191/282 (67%), Positives = 221/282 (78%), Gaps = 13/282 (4%)

Query: 1   MLCSRSCIRTIA----VTADHTNAASTTRSFPHSLAVDFSS-HPFPLIRTRRFRCPKSIL 55
           ML SR C+RT++      ADHTN A+T RS P S+AVDFS  H  PL   RRFRC +SIL
Sbjct: 1   MLGSRFCVRTLSGVGSAAADHTNVATTARSVPCSVAVDFSPLHLSPLRSRRRFRCRRSIL 60

Query: 56  IXXXXXXXXXXXFPDHHNND--DFLEASLLLSETISHYHMWRQRFQPELQRKSRRPSIPL 113
           I              H NN+  D+LEASLLLSET SHYHMW+ RFQPE Q KS  PSIPL
Sbjct: 61  ISCNSSRRRSSSDNSHDNNNKNDYLEASLLLSETFSHYHMWKHRFQPEFQWKSSTPSIPL 120

Query: 114 SVQEKTSRSYNNLSRQGFLQRFQNPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQES 173
           S      R+ ++L R GFLQRF+NPTIFL++SCDGDYILPIV+G+IAIEKL+ AE EQES
Sbjct: 121 S------RTDSSLLRHGFLQRFKNPTIFLRISCDGDYILPIVVGQIAIEKLMDAESEQES 174

Query: 174 EDCPDQFQFVKDLVDRLDHEVIMVRITERVVSTYFAKLYISQPGESGIISLDARPSDAIN 233
            +CPDQ+QFV++LV RLDHEVIMVRITERVVSTYFA+LY+SQPG++ +IS+DARPSDAIN
Sbjct: 175 VECPDQYQFVENLVGRLDHEVIMVRITERVVSTYFARLYLSQPGKTDLISVDARPSDAIN 234

Query: 234 VANRCKAPIYVSKQIVFTDAIRLGYGMGGVLKKKATYDVLLD 275
           VANRCKAPIYVSK+IVFTDAIR+GYGMGG   KKA YDVLLD
Sbjct: 235 VANRCKAPIYVSKEIVFTDAIRIGYGMGGAHNKKAIYDVLLD 276


>Glyma11g08700.2 
          Length = 281

 Score =  359 bits (922), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 191/282 (67%), Positives = 221/282 (78%), Gaps = 13/282 (4%)

Query: 1   MLCSRSCIRTIA----VTADHTNAASTTRSFPHSLAVDFSS-HPFPLIRTRRFRCPKSIL 55
           ML SR C+RT++      ADHTN A+T RS P S+AVDFS  H  PL   RRFRC +SIL
Sbjct: 1   MLGSRFCVRTLSGVGSAAADHTNVATTARSVPCSVAVDFSPLHLSPLRSRRRFRCRRSIL 60

Query: 56  IXXXXXXXXXXXFPDHHNND--DFLEASLLLSETISHYHMWRQRFQPELQRKSRRPSIPL 113
           I              H NN+  D+LEASLLLSET SHYHMW+ RFQPE Q KS  PSIPL
Sbjct: 61  ISCNSSRRRSSSDNSHDNNNKNDYLEASLLLSETFSHYHMWKHRFQPEFQWKSSTPSIPL 120

Query: 114 SVQEKTSRSYNNLSRQGFLQRFQNPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQES 173
           S      R+ ++L R GFLQRF+NPTIFL++SCDGDYILPIV+G+IAIEKL+ AE EQES
Sbjct: 121 S------RTDSSLLRHGFLQRFKNPTIFLRISCDGDYILPIVVGQIAIEKLMDAESEQES 174

Query: 174 EDCPDQFQFVKDLVDRLDHEVIMVRITERVVSTYFAKLYISQPGESGIISLDARPSDAIN 233
            +CPDQ+QFV++LV RLDHEVIMVRITERVVSTYFA+LY+SQPG++ +IS+DARPSDAIN
Sbjct: 175 VECPDQYQFVENLVGRLDHEVIMVRITERVVSTYFARLYLSQPGKTDLISVDARPSDAIN 234

Query: 234 VANRCKAPIYVSKQIVFTDAIRLGYGMGGVLKKKATYDVLLD 275
           VANRCKAPIYVSK+IVFTDAIR+GYGMGG   KKA YDVLLD
Sbjct: 235 VANRCKAPIYVSKEIVFTDAIRIGYGMGGAHNKKAIYDVLLD 276


>Glyma14g07830.1 
          Length = 250

 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 77/128 (60%), Gaps = 3/128 (2%)

Query: 121 RSYNNLSRQGFLQRFQ-NPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQESEDCPDQ 179
           R  +N  + G L  +  +P I LK+      +LPI++ ++    L+ A +       P  
Sbjct: 119 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMP-SVLLMAAIRNVPIARPTL 177

Query: 180 FQFVKDLVDRLDHEVIMVRITERVVSTYFAKLYISQPG-ESGIISLDARPSDAINVANRC 238
           +Q VK+++D++ +EV  VR+T RV   YFA+LY+++ G ++  +S D RPSDAIN+A RC
Sbjct: 178 YQVVKEMIDKMGYEVKFVRVTRRVHEAYFAQLYLTKVGNDAEYVSFDLRPSDAINIAVRC 237

Query: 239 KAPIYVSK 246
           K PI V+K
Sbjct: 238 KVPIQVNK 245


>Glyma17g37160.1 
          Length = 153

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 17/124 (13%)

Query: 195 IMVRITERVVSTYF-AKLYISQPG-ESGIISLDARPSDAINVANRCKAPIYVSKQIVFTD 252
           I +R+T R +  +   K Y    G E+  +S D RPSDAIN+A RCK PI V+K + ++D
Sbjct: 10  IKIRVTIRTLYHFLLKKTYFYLVGNEAEYVSFDLRPSDAINIAVRCKVPIQVNKYLAYSD 69

Query: 253 AIRLGY---------GMGGVLKKKATYDVLLDSPLDGPDVVAQELSMMRSMHTAIKMERF 303
            +R+           GM G L  +      +D P   P     E +++ +M  A+  ER+
Sbjct: 70  GMRVIESGKLSTQFPGMDGRLFTE------MDRPSGQPCSETTEFNLLHNMLKAVVEERY 123

Query: 304 KDAA 307
           KDA 
Sbjct: 124 KDAV 127