Miyakogusa Predicted Gene
- Lj2g3v1644380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1644380.1 Non Chatacterized Hit- tr|B9FEY3|B9FEY3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,45.37,3e-18,no
description,NULL; seg,NULL; Nucleotidyltransferase,NULL; Poly A
polymerase C-terminal region-like,CUFF.37573.1
(726 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g36420.1 756 0.0
Glyma11g08980.1 291 1e-78
Glyma08g01200.1 272 9e-73
Glyma04g37700.1 268 1e-71
Glyma05g38470.1 263 6e-70
Glyma06g17410.1 149 8e-36
Glyma11g08970.1 107 6e-23
Glyma20g31440.1 65 2e-10
Glyma10g36180.1 64 4e-10
>Glyma01g36420.1
Length = 612
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/605 (64%), Positives = 448/605 (74%), Gaps = 8/605 (1%)
Query: 42 STRRGCVGVSKWTSLDAEKLGIPRYMVSDSSWFVLKLLKSKGFKSYLVGGCVRDLLLNRT 101
S G + VSKW +LDAE+LGI M+S S FVLKLL+ KGF+SYLVGGCVRDLLLNRT
Sbjct: 6 SCYSGRIDVSKWKTLDAEELGITSSMISYPSQFVLKLLRRKGFESYLVGGCVRDLLLNRT 65
Query: 102 PKDFDIITKANLEQVRMLFXXXXXXXXXXXXFPVCLVHRKGSVVEVTCFETVSITSEGTE 161
PKDFD+IT A L +VR F FP+CLVH KGSVVEVT FETV+ TS E
Sbjct: 66 PKDFDVITTAKLMEVRAQFRGLARAEVVGRRFPICLVHIKGSVVEVTSFETVARTSNRKE 125
Query: 162 QFLKSVLPKCSNREGLFLFKNSLHRDFTINSLFYDPFANKVYDYANGMADLRSLKLETVI 221
QFL S+LPKCSN++ LF KNSL RDFTINSLFYDPFANK+YDY +GMADLRSLKLETVI
Sbjct: 126 QFLYSLLPKCSNKKDLFRCKNSLRRDFTINSLFYDPFANKIYDYTDGMADLRSLKLETVI 185
Query: 222 PAQLSFEEDPGRILRGFRIAARLGLSLSRETEAAIWTCSSLVKNLNKQKIMVELNYMLSY 281
PAQ+SF+EDPGRILRGFRIAARLGLSLSRETEAA+W SSLVK+L+K KIM+ELNYMLSY
Sbjct: 186 PAQMSFKEDPGRILRGFRIAARLGLSLSRETEAAMWKYSSLVKSLDKNKIMIELNYMLSY 245
Query: 282 GAAEPSXXXXXXXXXXXXXXXXXXXXXDEQATKEDAQASNMLMKLFFHLDKLVGCDRPSE 341
GAAEPS DEQA KEDA ASNMLMKLFF+LD LV CDRP +
Sbjct: 246 GAAEPSLHLLWKFKLLEFLLPVHAAYLDEQAIKEDAPASNMLMKLFFYLDNLVACDRPCD 305
Query: 342 CNLWVGLLAFHLALVDQPQDXXXXXXXXXXXYHGEWKEGVKFAKKCADMCVSFAPEIKSP 401
C LWVGLLAFHL LV+ PQD YHGEW++G+KFAK+ A M V+FAPEI++
Sbjct: 306 CTLWVGLLAFHLTLVNNPQDALVVWAFASVLYHGEWEKGIKFAKEHAKMYVNFAPEIRTS 365
Query: 402 SIYDSDEEIAKEVTKLAHLVMGSISALVEDKILTYFLSRYPHFPRSGMVFIPKKTGRSVC 461
SIY SDEEIAK VTKLA LVM SI ALVE L +SRYP FP+S M+F+PKK G+
Sbjct: 366 SIYKSDEEIAKAVTKLASLVMHSIPALVESNSLLQSMSRYPSFPQSDMIFVPKKAGKLAS 425
Query: 462 AIFKMLLVNDIKLYKS-KRKGSKINYTMLRSGDISEVGFVLGKIVLETMNSGIVGDRDDF 520
AIFKM L +D++ YK+ +RK SKINY ML G +SE+ FVLGKIVLETM+SG VGD +D
Sbjct: 426 AIFKM-LASDVEFYKTERRKNSKINYGMLGKGHLSEIAFVLGKIVLETMSSGTVGDGEDS 484
Query: 521 EAQQCHLKTEAPKEI--SQLSDLVNHHLVAKKGKRQVLSTPNPERRQQQIKKQNFFENRC 578
EA QCHLKTE KEI SQL DLVNH + A G+ +LS PN E RQ + KK+ +NRC
Sbjct: 485 EAGQCHLKTEGTKEIAQSQLPDLVNHEVAAMNGEGHLLSIPNSECRQGKSKKRKLVKNRC 544
Query: 579 NAKQKMGSENHELLEEFEYKKTNEEHQKLY---QKVDQSMTTDSLAKKKNSHRKQLINDR 635
AK+KM S N EL E+FEYK+ EE QKL QKVD S T DSL KKKN HRKQLI+DR
Sbjct: 545 IAKKKMSSGNQELSEKFEYKENKEEQQKLVKLSQKVDMS-TEDSLPKKKNDHRKQLISDR 603
Query: 636 KKIVS 640
KKI +
Sbjct: 604 KKITT 608
>Glyma11g08980.1
Length = 509
Score = 291 bits (746), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 189/458 (41%), Positives = 226/458 (49%), Gaps = 135/458 (29%)
Query: 52 KWTSLDAEKLGIPRYMVSDSSWFVLKLLKSKG---------------------------- 83
KW +LDA++LGI M+S S FVLKLL+ G
Sbjct: 1 KWKTLDAKELGITSSMISYPSQFVLKLLRRNGMLYAALPLHMQRGCFRIRTHDQQVTKAQ 60
Query: 84 -----------------FKSYLVGGCVRDLLLNRTPKDFDIITKANLEQVRMLFXXXXXX 126
SYLVGGCVRDLLLN+TPKDFD+IT A L +VR F
Sbjct: 61 LYRCTRARPLTHTQIFWIWSYLVGGCVRDLLLNKTPKDFDVITTAKLMEVRKRF------ 114
Query: 127 XXXXXXFPVCLVHRKGSVVEVTCFETVSITSEGTEQFLKSVLPKCSNREGLFLFKNSLHR 186
ETV+ TS EQFL S+LPKCSN++ LF KNSL R
Sbjct: 115 ------------------------ETVARTSNRKEQFLHSLLPKCSNKKDLFRCKNSLRR 150
Query: 187 DFTINSLFYDPFANKVYDYANGMADLRSLKLETVIPAQLSFEEDPGRILRGFRIAARLGL 246
DFTINSLFYDPFANK+Y Y +GMADLRSLKLETVIPAQ+SF+EDP ++ LGL
Sbjct: 151 DFTINSLFYDPFANKIYHYTDGMADLRSLKLETVIPAQMSFKEDPACTMKMNSHVKSLGL 210
Query: 247 --SLSRETEAAIWTCSSLVKNLNKQKIMVELNYMLSYGAAEPSXXXXXXXXXXXXXXXXX 304
LSRETEAA+W SSLVK+L+K KIM+ELNYMLSYGA+EPS
Sbjct: 211 VYHLSRETEAAMWKYSSLVKSLDKNKIMIELNYMLSYGASEPSLRLLWKLKLLEFLLPVH 270
Query: 305 XXXXDEQATKEDAQASNMLMKLFFHLDKLVGCDRPSECN-LWV-----------GLLAFH 352
DEQA KED L +HL + + +C+ LW L AFH
Sbjct: 271 AAYLDEQAIKED---------LTWHLTRPISRSTFKKCHQLWQIETTNKVSQERRLEAFH 321
Query: 353 LALVDQPQDXXXXXXXXXXXYHGEWKEGVKFAKKCADMCVSFAPEIKSPSIYDSDEEIAK 412
LALV+ PQD YHGEW++G+KFAK+ A M
Sbjct: 322 LALVNNPQDALVVWAFASVLYHGEWEKGIKFAKEHAKM---------------------- 359
Query: 413 EVTKLAHLVMGSISALVEDKILTYFLSRYPHFPRSGMV 450
+E+ L +SRYP FP+S MV
Sbjct: 360 ---------------FIENNSLLQSMSRYPSFPQSAMV 382
>Glyma08g01200.1
Length = 469
Score = 272 bits (696), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 246/461 (53%), Gaps = 6/461 (1%)
Query: 50 VSKWTSLDAEKLGIPRYMVSDSSWFVLKLLKSKGFKSYLVGGCVRDLLLNRTPKDFDIIT 109
V W L++++LG+ M++ + VL +LK KG YLVGGCVRDL+L +TPKDFDIIT
Sbjct: 6 VQAWKKLNSKELGLRNSMIAVPTKKVLNVLKKKGHDVYLVGGCVRDLILKQTPKDFDIIT 65
Query: 110 KANLEQVRMLFXXXXXXXXXXXXFPVCLVHRKGSVVEVTCFETVSITSEGTEQFLKSVLP 169
A+L++VR F FP+C VH G++VEV+ F T S + P
Sbjct: 66 SADLKEVRKTFSWCEIVGKR---FPICHVHMDGTIVEVSSFNTARCKSSMHFIYDDIEAP 122
Query: 170 KCSNREGLFLFKNSLHRDFTINSLFYDPFANKVYDYANGMADLRSLKLETVIPAQLSFEE 229
++E ++N L RDFTIN L +DP+A VYDY GM D+ K+ TV+PA SF E
Sbjct: 123 NDCDKEDYLRWRNCLKRDFTINGLMFDPYARIVYDYMGGMEDIIKAKVRTVVPAATSFRE 182
Query: 230 DPGRILRGFRIAARLGLSLSRETEAAIWTCSSLVKNLNKQKIMVELNYMLSYGAAEPSXX 289
D RILR R+AARLG S+SRET ++ S V L+K ++ +E+NYML+YG+ E S
Sbjct: 183 DCARILRAIRVAARLGFSISRETAQSVKNLSYSVLRLDKGRLWMEINYMLAYGSGEASLR 242
Query: 290 XXXXXXXXXXXXXXXXXXXDEQATKEDAQASNMLMKLFFHLDKLVGCDRPSECNLWVGLL 349
+ + +N+L+ F ++DKL+ +RP +LWV +L
Sbjct: 243 LLWRFGLLDILLPFQAAYFVCGGFRRRDKRTNLLLSFFSNVDKLLAPNRPCHSSLWVAIL 302
Query: 350 AFHLALVDQPQDXXXXXXXXXXXYH-GEWKEGVKFAKKCADMCVSFAPEIKSPSIYDSDE 408
A H AL D+P+D ++ G E + A++ + PE+ PS D +E
Sbjct: 303 ALHKALSDKPRDSSVVAAFSLALHNGGNLSEAINIARRINKAHDARFPELLDPSGLD-EE 361
Query: 409 EIAKEVTKLAHLVMGSISALVEDKILTYFLSRYPHFPRSGMVFIPKKTGRSVCAIFKMLL 468
+ E+ LA V GS+ + + +++ ++ YP P S +V IP F +
Sbjct: 362 NLEAEILDLAESVKGSLLQMTDRHLVSGAMADYPQAPHSNLVLIPLSMFLKALNFFDCVN 421
Query: 469 VNDIKLYKSKRKGSKINYTMLRSGDISEVGFVLGKIVLETM 509
V+ K Y SK +G +I+Y L GD+ EV V +IV +T+
Sbjct: 422 VSTGKNYLSK-QGRQIDYESLARGDLLEVRHVFARIVFDTV 461
>Glyma04g37700.1
Length = 458
Score = 268 bits (686), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 239/444 (53%), Gaps = 7/444 (1%)
Query: 67 MVSDSSWFVLKLLKSKGFKSYLVGGCVRDLLLNRTPKDFDIITKANLEQVRMLFXXXXXX 126
M+ ++ VL LK KG+ YLVGGCVRDL+L +TPKDFDIIT A L++V F
Sbjct: 1 MIGSTTKKVLNGLKKKGYDVYLVGGCVRDLILKKTPKDFDIITSAELKEVTRTFSWSEIV 60
Query: 127 XXXXXXFPVCLVHRKGSVVEVTCFETVSITSEGTEQFLKSVLPKCSNREGLFLFKNSLHR 186
FPVC VH ++VEV+ F+T + G E P ++ + N L+R
Sbjct: 61 GKR---FPVCHVHMDDTIVEVSSFDTTKCKA-GMEFSHHIEAPSGCGKKDHLRWMNCLNR 116
Query: 187 DFTINSLFYDPFANKVYDYANGMADLRSLKLETVIPAQLSFEEDPGRILRGFRIAARLGL 246
DFTIN L DP+A YDY G+ D+R K+ TVIPA+ SF+ED RILR RIAARLG
Sbjct: 117 DFTINGLMLDPYARIAYDYFGGIEDIRKAKVRTVIPAETSFQEDCARILRAIRIAARLGF 176
Query: 247 SLSRETEAAIWTCSSLVKNLNKQKIMVELNYMLSYGAAEPSXXXXXXXXXXXXXXXXXXX 306
S+S+ET I SS V +L+K ++++E+NYML++G+ E S
Sbjct: 177 SISKETAHFIKNLSSSVLSLDKGRLLMEMNYMLAFGSGEASLRLLWKFGLLDILLPFQAA 236
Query: 307 XXDEQATKEDAQASNMLMKLFFHLDKLVGCDRPSECNLWVGLLAFHLALVDQPQDXXXXX 366
+ + + +NML+ LF +LDKL+ +RP +LWVG+LA H AL D+P++
Sbjct: 237 YFAQHGFQRRDRRTNMLLSLFSNLDKLLAPNRPCHNSLWVGILALHKALSDRPRNPLAVA 296
Query: 367 XXXXXXYH-GEWKEGVKFAKKCADMCVSFAPEIKSPSIYDSDEEIAKEVTKLAHLVMGSI 425
++ G E V A PE+ PS D+ E + E+ LA V G+I
Sbjct: 297 AFSLAVHNGGNLLEAVSMAGMINKPHDVRFPELLDPSGLDA-EALEAEILDLAESVRGTI 355
Query: 426 SALVEDKILTYFLSRYPHFPRSGMVFIPKKTGRSVCAIFKMLLVNDIKLYKSKRKGSKIN 485
+ + ++ ++ YP PRS +VFIP V +F + + +K + SK+ KI+
Sbjct: 356 LQMTNEYFVSQAMADYPQAPRSNLVFIPITLYVKVYNMFDCVRRSTVKKFLSKQH-RKID 414
Query: 486 YTMLRSGDISEVGFVLGKIVLETM 509
Y L G++ EV V +IV +T+
Sbjct: 415 YQSLALGNLQEVRHVFARIVFDTV 438
>Glyma05g38470.1
Length = 458
Score = 263 bits (671), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 227/428 (53%), Gaps = 6/428 (1%)
Query: 83 GFKSYLVGGCVRDLLLNRTPKDFDIITKANLEQVRMLFXXXXXXXXXXXXFPVCLVHRKG 142
G YLVGGCVRDL+L +TPKDFDIIT A+L++VR F FP+C VH G
Sbjct: 17 GHDVYLVGGCVRDLILKQTPKDFDIITSADLKEVRKTFSLCEIVGKR---FPICHVHMDG 73
Query: 143 SVVEVTCFETVSITSEGTEQFLKSVLPKCSNREGLFLFKNSLHRDFTINSLFYDPFANKV 202
++VEV+ F T S + P ++E ++N L RDFTIN L +DP+A V
Sbjct: 74 TIVEVSSFNTARCKSSMHFIYDDIEAPHDCDKEDYLRWRNCLRRDFTINGLMFDPYARIV 133
Query: 203 YDYANGMADLRSLKLETVIPAQLSFEEDPGRILRGFRIAARLGLSLSRETEAAIWTCSSL 262
YDY GM D+ K+ TV+PA SF ED RILR RIAARLG S+SRET ++ S
Sbjct: 134 YDYMGGMEDIVKAKVRTVVPAATSFREDCARILRAIRIAARLGFSISRETAQSVKNLSYS 193
Query: 263 VKNLNKQKIMVELNYMLSYGAAEPSXXXXXXXXXXXXXXXXXXXXXDEQATKEDAQASNM 322
V L++ ++++E+NYML+YG+ E S + + +N+
Sbjct: 194 VLRLDRSRLLMEINYMLAYGSGEASLRLLWRFGLLDILLPFQAAYFVRGGFRRRDKRTNL 253
Query: 323 LMKLFFHLDKLVGCDRPSECNLWVGLLAFHLALVDQPQDXXXXXXXXXXXYH-GEWKEGV 381
L+ F ++DKL+ +RP +LWV +LA H AL D+P+D ++ G E +
Sbjct: 254 LLSFFSNVDKLLAPNRPCHSSLWVVILALHKALSDKPRDSSVVAAFSLALHNGGNLSEAI 313
Query: 382 KFAKKCADMCVSFAPEIKSPSIYDSDEEIAKEVTKLAHLVMGSISALVEDKILTYFLSRY 441
A++ + PE+ PS D +E++ E+ LA V GS+ + + ++ ++ Y
Sbjct: 314 SIARRINKTHDARFPELLDPSGLD-EEDLEAEILDLAESVKGSLLQMKDRHFVSGAMADY 372
Query: 442 PHFPRSGMVFIPKKTGRSVCAIFKMLLVNDIKLYKSKRKGSKINYTMLRSGDISEVGFVL 501
P P S +V IP F + V+ K + SK +G +I+Y L GD+ EV V
Sbjct: 373 PQAPHSDLVLIPIPMYLRALNFFDCVRVSASKNFLSK-QGRQIDYESLARGDLLEVRHVF 431
Query: 502 GKIVLETM 509
+IV +T+
Sbjct: 432 ARIVFDTV 439
>Glyma06g17410.1
Length = 431
Score = 149 bits (377), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 157/331 (47%), Gaps = 35/331 (10%)
Query: 133 FPVCLVHRKGSVVEVTCFETVSITSEGTEQFLKSVLPKCSNREGLFLFKNSLHRDFTINS 192
FPVC VH ++VEV+ F+T + G E P +++ + N L+RDFTIN
Sbjct: 104 FPVCHVHIDDTIVEVSSFDTTKCKA-GMEFSHHIEAPNGCDKKDQLRWMNCLNRDFTING 162
Query: 193 LFYDPFANKVYDYANGMADLRSLKL---------ETVIPAQLSFEEDPGRILRGFRIAAR 243
L DP+A VYDY G+ D+R K+ TVIP + SF+ED ILR RIAAR
Sbjct: 163 LMLDPYARIVYDYFGGIEDIRKAKMCMYLISSVVRTVIPTETSFQEDCAGILRAIRIAAR 222
Query: 244 LGLSLSRETEAAIWTCSSLVKNLNKQKIMVELNYMLSYGAAEPSXXXXXXXXXXXXXXXX 303
LG S+S+ET I SS V +L+K ++++E+NYML+YG+ E S
Sbjct: 223 LGFSISKETTHFINNLSSSVLSLDKGRLLMEMNYMLAYGSGEAS-----------LRLLW 271
Query: 304 XXXXXDEQATKEDAQASNMLMKLFFHLDKLVGCDRPSE-CNLWVGLLAFHLALVDQPQDX 362
D + A NM K DR E WVG+LA H AL D+ +D
Sbjct: 272 KSGLLDILLPFQAAYLLNMDFK-----------DRIEEPICFWVGILALHKALSDRLRDP 320
Query: 363 XXXXXXXXXXYH-GEWKEGVKFAKKCADMCVSFAPEIKSPSIYDSDEEIAKEVTKLAHLV 421
++ G E + + PE+ PS D+ E + E+ LA V
Sbjct: 321 LAVAAFSLAVHNGGNLLEAINITGMINKPHDARFPELLDPSGLDA-EALEAEILDLAESV 379
Query: 422 MGSISALVEDKILTYFLSRYPHFPRSGMVFI 452
G+I + + ++ ++ YP PRS +V I
Sbjct: 380 RGTILQMTNEHFVSQAMADYPQSPRSNLVSI 410
>Glyma11g08970.1
Length = 119
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 6/99 (6%)
Query: 450 VFIPKKTGRSVCAIFKMLLVNDIKLYKS-KRKGSKINYTMLRSGDISEVGFVLGKIVLET 508
VF+PKK G+ AIFKML +D++ YK+ KRK SKINY ML G IS FVLGKIVLET
Sbjct: 8 VFVPKKAGKLAYAIFKML-ASDVEFYKTEKRKNSKINYDMLGKGHIS--AFVLGKIVLET 64
Query: 509 MNSGIVGDRDDFEAQQCHLKTEAPKEI--SQLSDLVNHH 545
M+SG VGD +D EA QCHLKTE KE SQL D+ N +
Sbjct: 65 MSSGTVGDGEDSEAGQCHLKTEGTKETAQSQLPDVDNFY 103
>Glyma20g31440.1
Length = 575
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 181 KNSLHRDFTINSLFYDPFANKVYDYA-NGMADLRSLKLETVIPAQLSFEEDPGRILRGFR 239
+++ RD TINSLFY+ + V D+ G++DL+S K+ T +P + +F +DP R+LR R
Sbjct: 200 EDAYRRDLTINSLFYNINTDSVEDFTKRGISDLKSGKIVTPLPPKATFLDDPLRVLRAIR 259
Query: 240 IAARLGLSLSRETEAAIWTC----SSLVKNLNKQKIMVELNYMLS 280
AR +L + + A C +L +++++I E++ M+S
Sbjct: 260 FGARFEFTLDEDLKVAA-ACDDVKDALAAKISRERIGTEIDLMIS 303
>Glyma10g36180.1
Length = 577
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 181 KNSLHRDFTINSLFYDPFANKVYDYA-NGMADLRSLKLETVIPAQLSFEEDPGRILRGFR 239
+++ RD TINSLFY + V D+ G++DL+S K+ T +P + +F +DP R+LR R
Sbjct: 202 EDAYRRDLTINSLFYHINTDSVEDFTKRGISDLKSGKIVTPLPPKATFLDDPLRVLRAIR 261
Query: 240 IAARLGLSLSRETEAAIWTC----SSLVKNLNKQKIMVELNYMLS 280
AR +L + + A C +L +++++I E++ M+S
Sbjct: 262 FGARFEFTLDEDLKVAA-ACDDVKDALAAKISRERIGTEIDLMIS 305