Miyakogusa Predicted Gene

Lj2g3v1643230.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1643230.3 tr|J9ANG3|J9ANG3_BACCE ATP-dependent DNA helicase
RecQ OS=Bacillus cereus BtB2-4 PE=4
SV=1,28.02,0.00000000000007,seg,NULL; DNA HELICASE RECQ,NULL; DNA
HELICASE RECQ FAMILY MEMBER,NULL; HRDC-like,HRDC-like;
HRDC,He,CUFF.37596.3
         (395 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g05540.1                                                       421   e-118
Glyma11g31730.1                                                       391   e-109

>Glyma18g05540.1 
          Length = 311

 Score =  421 bits (1081), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/321 (70%), Positives = 246/321 (76%), Gaps = 27/321 (8%)

Query: 91  FLGVIQKLSQGLNLSLDGEA-----SMQTNEVRKVSPVNINKSRKLTPAKFEAWKMWHED 145
           FL VIQKLSQ LNLSLDGEA     S+QTNEVRKVS V  NKS KLTPAKFEAWK WHED
Sbjct: 2   FLQVIQKLSQVLNLSLDGEARVATASLQTNEVRKVSLVT-NKSNKLTPAKFEAWKKWHED 60

Query: 146 GLSIEKIANFPGRSAPIKEQTVAEYLLEAAQEGLPFDWTRFCEMIGLTQEIMSEIQGAIL 205
           G SI +IANFPGRSAPIKEQ+VAEYLLEAAQEGLPFDW RF EMIGLTQ I+SEIQGAI 
Sbjct: 61  GCSIHEIANFPGRSAPIKEQSVAEYLLEAAQEGLPFDWARFSEMIGLTQGIISEIQGAIS 120

Query: 206 KVGSEDKLKPIKNELPEDITYQHIKAYLTMRSC---------GGPQSGKDGEXXXXXXXX 256
           KVGS DKLKPIKNELPE+I+YQHIK YLTMR+C         G  Q+GKD E        
Sbjct: 121 KVGSTDKLKPIKNELPEEISYQHIKTYLTMRNCGISLEAIQSGSNQTGKDDE-------- 172

Query: 257 XXXXXXXXLSEPHLETCYKERPLEADITGKSLKENFDLEIDEVVLSGPVNGSTVQKLPLA 316
                   LS+P LETC+ ER  E  I+ KS  E +DLEIDEV +  PVNGS VQKLPL 
Sbjct: 173 -PAHNASNLSDPTLETCHVERYCEDGISAKSSLEKWDLEIDEVPIL-PVNGSEVQKLPLV 230

Query: 317 CEGEFTAKRQKVAE--EVKSVKLKATESSVVEWLKNLDEGATLIDVLEHFNGSDEDSVVE 374
           CEGEFT KRQKV+E  EV S KLKATESSVVEWLKNLDEGATL DVLEHFNGS +DSVVE
Sbjct: 231 CEGEFTNKRQKVSETKEVNSTKLKATESSVVEWLKNLDEGATLSDVLEHFNGSSKDSVVE 290

Query: 375 VLNCLECDFAIYKKGNMYRAM 395
           +LNCL+ DF+IY KG  Y+ +
Sbjct: 291 LLNCLQSDFSIYSKGGTYKIL 311


>Glyma11g31730.1 
          Length = 301

 Score =  391 bits (1005), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/322 (67%), Positives = 236/322 (73%), Gaps = 37/322 (11%)

Query: 90  HFLGVIQKLSQGLNLSLDGEA-----SMQTNEVRKVSPVNINKSRKLTPAKFEAWKMWHE 144
           HFL VIQKLSQGLNLSLDGEA     S+QTNEVRKVS V  NKS KLTPAKFEAWKMWHE
Sbjct: 1   HFLQVIQKLSQGLNLSLDGEARVATASLQTNEVRKVSLVT-NKSNKLTPAKFEAWKMWHE 59

Query: 145 DGLSIEKIANFPGRSAPIKEQTVAEYLLEAAQEGLPFDWTRFCEMIGLTQEIMSEIQGAI 204
           DG SI +IANFPGRSAPIKEQ VAEYLLEAAQEGLPFDW RF EMIGLTQEI+SEIQGAI
Sbjct: 60  DGCSIHEIANFPGRSAPIKEQIVAEYLLEAAQEGLPFDWARFSEMIGLTQEIISEIQGAI 119

Query: 205 LKVGSEDKLKPIKNELPEDITYQHIKAYLTMRSCG----GPQSG-----KDGEXXXXXXX 255
            KVGS DKLKPIKNELP++ITYQHIK YLTMR+CG      QSG     KDGE       
Sbjct: 120 SKVGSTDKLKPIKNELPKEITYQHIKTYLTMRNCGISLEAIQSGSIQTEKDGE------- 172

Query: 256 XXXXXXXXXLSEPHLETCYKERPLEADITGKSLKENFDLEIDEVVLSGPVNGSTVQKLPL 315
                    LS P LETC+ ER  E  I+  S  E  +LEI+EV  + PVNGS VQKL L
Sbjct: 173 --PAHNASNLSGPTLETCHVERHCEDGISAISSTEKCNLEINEVP-TLPVNGSEVQKLSL 229

Query: 316 ACEGEFTAKRQKVAE--EVKSVKLKATESSVVEWLKNLDEGATLIDVLEHFNGSDEDSVV 373
             EG FT KR KV+E  EV S KLKATESSV          ATL DVLEHFNGS EDSVV
Sbjct: 230 TSEGGFTNKRHKVSETKEVNSTKLKATESSV----------ATLSDVLEHFNGSSEDSVV 279

Query: 374 EVLNCLECDFAIYKKGNMYRAM 395
           E+LNCL+C+F+IY+KG +YR M
Sbjct: 280 ELLNCLDCNFSIYRKGGIYRIM 301